BLASTX nr result
ID: Coptis25_contig00016704
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016704
(266 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonin... 83 3e-14
ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine... 80 1e-13
ref|XP_002531443.1| serine-threonine protein kinase, plant-type,... 79 3e-13
ref|XP_002264576.1| PREDICTED: LRR receptor-like serine/threonin... 79 5e-13
ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine... 77 1e-12
>ref|XP_002283141.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1464
Score = 82.8 bits (203), Expect = 3e-14
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNI-SLSTLRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
LS N L GQ+ P + N+ SL L L+DN F+G IP+L+ S S L +S N ISG++P
Sbjct: 997 LSKNDLHGQMFPRVSNLPSLRHLELDDNHFSGKIPDLSNS--SGLERLYVSHNSISGKLP 1054
Query: 178 TWIGNLTELKVLFLGNNSFDGPIPLEFCN 264
WIGN++ L L + NNS +GPIP+EFC+
Sbjct: 1055 GWIGNMSNLAALVMPNNSLEGPIPVEFCS 1083
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNISLST-LRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
LSNN L G + P+ F+ SL + L +N TG + + TLD+ N +SG IP
Sbjct: 1092 LSNNNLSGSL-PSCFSPSLLIHVHLQENHLTGPLTKAFTRSMDLA-TLDIRNNNLSGGIP 1149
Query: 178 TWIGNLTELKVLFLGNNSFDGPIPLEFC 261
WI + L +L L N F G IP + C
Sbjct: 1150 DWISMFSGLSILLLKGNHFQGKIPYQLC 1177
>ref|XP_002262931.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180-like [Vitis vinifera]
Length = 1231
Score = 80.5 bits (197), Expect = 1e-13
Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNI-SLSTLRLNDNQFTGNIPNLTPSVLSRPN---TLDLSRNRISG 168
LSNN+ G+I FN+ SL L L++NQF G + N V+SR + LD+S N +SG
Sbjct: 571 LSNNKFHGEIFSRDFNLTSLEFLHLDNNQFKGTLSN----VISRSSWLRVLDVSNNNMSG 626
Query: 169 EIPTWIGNLTELKVLFLGNNSFDGPIPLE 255
EIP+WIGN+T+L L LGNNSF G +P E
Sbjct: 627 EIPSWIGNMTDLTTLVLGNNSFKGKLPPE 655
>ref|XP_002531443.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223528936|gb|EEF30930.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 912
Score = 79.3 bits (194), Expect = 3e-13
Identities = 46/89 (51%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNIS-LSTLRLNDNQFTGNIP-NLTPSVLSRPNTLDLSRNRISGEI 174
LSNN L GQ+ FN++ L L L+ N F+G IP +L+ S LS +DLS N +SG I
Sbjct: 479 LSNNSLQGQMFSKQFNLTNLWWLELDKNHFSGRIPKSLSKSALS---IMDLSDNHLSGMI 535
Query: 175 PTWIGNLTELKVLFLGNNSFDGPIPLEFC 261
P WIGNL+ L+ L L NN GPIP+EFC
Sbjct: 536 PGWIGNLSYLQNLILSNNRLKGPIPVEFC 564
Score = 59.7 bits (143), Expect = 2e-07
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 23/110 (20%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNIS-LSTLRLNDNQFTGNIPN-LTPSVLSRPN------------- 135
LSNNRL G I + L L L +N +G +P+ L+PS + +
Sbjct: 550 LSNNRLKGPIPVEFCQLHYLEVLDLANNSVSGILPSCLSPSSIIHVHLSQNMIEGPWTNA 609
Query: 136 --------TLDLSRNRISGEIPTWIGNLTELKVLFLGNNSFDGPIPLEFC 261
TLDLS NRI+G IPT IG + L++L L +N FDG IP + C
Sbjct: 610 FSGSHFLVTLDLSSNRITGRIPTLIGGINALRILNLKSNRFDGEIPAQIC 659
>ref|XP_002264576.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
GSO1-like [Vitis vinifera]
Length = 1031
Score = 78.6 bits (192), Expect = 5e-13
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNI-SLSTLRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
LSNNRL GQI FN+ LS L LN+N FTG + N S ++ LD+S N +SG+IP
Sbjct: 549 LSNNRLHGQIFSTRFNMPELSFLGLNNNHFTGTLSNGL-SECNQLRFLDVSNNYMSGKIP 607
Query: 178 TWIGNLTELKVLFLGNNSFDGPIPLEF 258
TW+ N+T L L L NNSF G +P EF
Sbjct: 608 TWMPNMTYLDTLILSNNSFHGQVPHEF 634
Score = 62.0 bits (149), Expect = 5e-08
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNI-SLSTLRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
LSNNR G I P ++N+ SL L L DNQ TG +P L LDLS N + G P
Sbjct: 248 LSNNRFTGSIPPYIWNLTSLQALSLADNQLTGPLPVEGFCKLKNLQELDLSGNSLDGMFP 307
Query: 178 TWIGNLTELKVLFLGNNSFDGPIP 249
+ N+ LK+L L N F G IP
Sbjct: 308 PCLSNMRSLKLLDLSLNQFTGKIP 331
Score = 59.3 bits (142), Expect = 3e-07
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNIS-LSTLRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
L NR G I + N S L TL L DN +GNIP + S LS L N G+IP
Sbjct: 665 LKGNRFTGSIPEDFLNSSELLTLDLGDNSLSGNIPK-SFSALSSLRIFSLRENNFKGQIP 723
Query: 178 TWIGNLTELKVLFLGNNSFDGPIPLEFCN 264
++ L ++ ++ L +N+F GPIP F N
Sbjct: 724 NFLCQLNKISIMDLSSNNFSGPIPQCFRN 752
>ref|XP_002269212.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At4g36180-like [Vitis vinifera]
Length = 747
Score = 77.0 bits (188), Expect = 1e-12
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNIS-LSTLRLNDNQFTGNIPNLTPSVLSRPN---TLDLSRNRISG 168
LSNN+ G+I FN++ L L L +NQFTG + N V+SR + LD+S N +SG
Sbjct: 281 LSNNKFHGEIFSRDFNLTGLRYLYLGNNQFTGTLSN----VISRSSWLWELDVSNNYMSG 336
Query: 169 EIPTWIGNLTELKVLFLGNNSFDGPIPLE 255
EIP WIGN+T L L LGNNSF G +P E
Sbjct: 337 EIPNWIGNMTYLTTLVLGNNSFKGKLPPE 365
Score = 55.8 bits (133), Expect = 3e-06
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 LSNNRLDGQISPNLFNIS-LSTLRLNDNQFTGNIPNLTPSVLSRPNTLDLSRNRISGEIP 177
L N G I + N S L TL + DN+ G+IPN + S L + L L N +SG IP
Sbjct: 400 LQGNMFIGLIPRDFLNSSYLLTLDIRDNRLFGSIPN-SISALLKLKILLLRGNLLSGFIP 458
Query: 178 TWIGNLTELKVLFLGNNSFDGPIP 249
+ +LTE+ ++ L NNSF GPIP
Sbjct: 459 NHLCHLTEISLMDLSNNSFSGPIP 482