BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016702
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    82   5e-14
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...    79   4e-13
ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [S...    79   5e-13
gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| un...    78   7e-13
ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea ma...    78   7e-13

>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = -2

Query: 219 PLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNPANSYAPCTVLWLTVDEDFQDALE 40
           P+QV CGAAHT++VA  GY +WA G GRSG LG D   +SY PC V+W  +DE+FQ+  E
Sbjct: 373 PVQVTCGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDENFQEIHE 432

Query: 39  FAGQ 28
             GQ
Sbjct: 433 NQGQ 436


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 33/57 (57%), Positives = 42/57 (73%)
 Frame = -2

Query: 219 PLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNPANSYAPCTVLWLTVDEDFQD 49
           P+QV CGAAHT++VA  GY +WA G GRSG LG D   +SY PC V+W  +DE+FQ+
Sbjct: 375 PVQVACGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDENFQE 431


>ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
           gi|241928250|gb|EES01395.1| hypothetical protein
           SORBIDRAFT_03g033330 [Sorghum bicolor]
          Length = 560

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = -2

Query: 219 PLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNPANSYAPCTVLWLTVDEDFQDALE 40
           P+Q+ CGAAHT++VA  GY +WA G GRSG LG    A+SY PC V+W  +DE+FQ+  E
Sbjct: 372 PVQISCGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFQEIHE 431

Query: 39  --FAGQETRIQD 10
               G  +R+ D
Sbjct: 432 DQAGGSTSRVND 443


>gb|ACL53116.1| unknown [Zea mays] gi|224034505|gb|ACN36328.1| unknown [Zea mays]
           gi|414880673|tpg|DAA57804.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|414880674|tpg|DAA57805.1| TPA: putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays]
          Length = 416

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = -2

Query: 219 PLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNPANSYAPCTVLWLTVDEDFQDALE 40
           P+Q+ CGAAHT++VA  GY +WA G GRSG LG    A+SY PC V+W  +DE+F +  +
Sbjct: 232 PVQIACGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHED-Q 290

Query: 39  FAGQETRIQD 10
             G  +R+ D
Sbjct: 291 MGGSTSRVND 300


>ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
           gi|194690372|gb|ACF79270.1| unknown [Zea mays]
           gi|219884485|gb|ACL52617.1| unknown [Zea mays]
           gi|219885259|gb|ACL53004.1| unknown [Zea mays]
           gi|219885461|gb|ACL53105.1| unknown [Zea mays]
           gi|238010394|gb|ACR36232.1| unknown [Zea mays]
           gi|414880676|tpg|DAA57807.1| TPA: putative regulator of
           chromosome condensation (RCC1) family protein [Zea mays]
          Length = 556

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/70 (48%), Positives = 47/70 (67%)
 Frame = -2

Query: 219 PLQVVCGAAHTIIVAHSGYGLWASGTGRSGGLGSDNPANSYAPCTVLWLTVDEDFQDALE 40
           P+Q+ CGAAHT++VA  GY +WA G GRSG LG    A+SY PC V+W  +DE+F +  +
Sbjct: 372 PVQIACGAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHED-Q 430

Query: 39  FAGQETRIQD 10
             G  +R+ D
Sbjct: 431 MGGSTSRVND 440