BLASTX nr result

ID: Coptis25_contig00016700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016700
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation...   132   4e-29
gb|AAQ08191.1| eukaryotic translation initiation factor 5A isofo...   131   5e-29
gb|AAQ08193.1| eukaryotic translation initiation factor 5A isofo...   131   5e-29
gb|ACP31199.1| eukaryotic initiation factor 5A2 [Musa hybrid cul...   130   1e-28
gb|AAF27938.1|AF225297_1 translation initiation factor 5A [Eupho...   129   3e-28

>ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation factor 5A [Vitis
           vinifera] gi|147807413|emb|CAN70753.1| hypothetical
           protein VITISV_014697 [Vitis vinifera]
           gi|296090571|emb|CBI40934.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/77 (88%), Positives = 71/77 (92%), Gaps = 5/77 (6%)
 Frame = +1

Query: 76  VPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVM 255
           VPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT++ LLSQIKDGFADGKDLVVTVM
Sbjct: 83  VPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFADGKDLVVTVM 142

Query: 256 SAMG-----ALKDIGPK 291
           SAMG     ALKDIGPK
Sbjct: 143 SAMGEEQICALKDIGPK 159


>gb|AAQ08191.1| eukaryotic translation initiation factor 5A isoform I [Hevea
           brasiliensis] gi|33325119|gb|AAQ08192.1| eukaryotic
           translation initiation factor 5A isoform II [Hevea
           brasiliensis]
          Length = 160

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/77 (88%), Positives = 71/77 (92%), Gaps = 5/77 (6%)
 Frame = +1

Query: 76  VPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVM 255
           VPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+E LLSQIKDGFA+GKDLVVTVM
Sbjct: 83  VPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVM 142

Query: 256 SAMG-----ALKDIGPK 291
           SAMG     ALKDIGPK
Sbjct: 143 SAMGEEQICALKDIGPK 159


>gb|AAQ08193.1| eukaryotic translation initiation factor 5A isoform III [Hevea
           brasiliensis]
          Length = 160

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/77 (88%), Positives = 71/77 (92%), Gaps = 5/77 (6%)
 Frame = +1

Query: 76  VPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVM 255
           VPHVNRTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+E LLSQIKDGFA+GKDLVVTVM
Sbjct: 83  VPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVM 142

Query: 256 SAMG-----ALKDIGPK 291
           SAMG     ALKDIGPK
Sbjct: 143 SAMGEEQICALKDIGPK 159


>gb|ACP31199.1| eukaryotic initiation factor 5A2 [Musa hybrid cultivar]
          Length = 159

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/77 (87%), Positives = 70/77 (90%), Gaps = 5/77 (6%)
 Frame = +1

Query: 76  VPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVM 255
           VPHVNRTDYQLIDISEDGFVSLL ENG+TKDDLRLPT+E LL+QIKDGFADGKDLVVTVM
Sbjct: 83  VPHVNRTDYQLIDISEDGFVSLLMENGNTKDDLRLPTDETLLAQIKDGFADGKDLVVTVM 142

Query: 256 SAMG-----ALKDIGPK 291
           SAMG     ALKDIGPK
Sbjct: 143 SAMGEEQICALKDIGPK 159


>gb|AAF27938.1|AF225297_1 translation initiation factor 5A [Euphorbia esula]
          Length = 156

 Score =  129 bits (324), Expect = 3e-28
 Identities = 66/77 (85%), Positives = 70/77 (90%), Gaps = 5/77 (6%)
 Frame = +1

Query: 76  VPHVNRTDYQLIDISEDGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVM 255
           VPHV RTDYQLIDISEDGFVSLLTENG+TKDDLRLPT+E+LLSQIKDGF DGKDLVVTVM
Sbjct: 80  VPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDESLLSQIKDGFGDGKDLVVTVM 139

Query: 256 SAMG-----ALKDIGPK 291
           S+MG     ALKDIGPK
Sbjct: 140 SSMGEEQICALKDIGPK 156


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