BLASTX nr result

ID: Coptis25_contig00016698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016698
         (1796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   556   e-156
ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil dom...   545   e-152
ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|2...   537   e-150
ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm...   529   e-147
ref|NP_001078500.2| uncharacterized protein [Arabidopsis thalian...   524   e-146

>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein 4
            [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
            protein product [Vitis vinifera]
          Length = 662

 Score =  556 bits (1434), Expect = e-156
 Identities = 306/590 (51%), Positives = 372/590 (63%), Gaps = 10/590 (1%)
 Frame = +2

Query: 56   LSPTHRYXXXXXXXXXXNQAQIHQTRPLGSEYQDEERIXXXXXXXXXXXEDPQLWVHESS 235
            L+PT RY           QAQIHQTRPLGS  +++ERI           EDPQLWVHE+S
Sbjct: 5    LTPTQRYAAGALLGLALQQAQIHQTRPLGSSIEEDERISSGSSSDSVS-EDPQLWVHENS 63

Query: 236  GLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDG-ETSSERMDQEHALSN 412
            GLLRPVF+ L+I+  AW GLEET GSSPAKHH+GAFLR++SE+  E+S++  D E ALS 
Sbjct: 64   GLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAESSADMKDAELALSK 123

Query: 413  GVDAMAMSMENAISSKESRLAYKPEHLGNXXXXXXXXXXXXVQGSSEDAVV--------S 568
             VD M +SME   ++ E+ ++ K +H               +Q +SE   V        +
Sbjct: 124  AVDVMELSME---TTSETSMSKKEKHREYENKCREKCSPADMQPNSEVVDVPLQAQELKN 180

Query: 569  CSK-ELSEAADGPAGILFEEPVEEIMLLSHHRKVAVLYELLSGCLANMPEDKKKHSRLRK 745
            C++  + +   G +    E+PVEE+ +L++ RKV VLYELLS CL + PED KK +R RK
Sbjct: 181  CNELSIEQTPYGSSSKFDEKPVEEVAMLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRK 240

Query: 746  GYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXXXXKWSKWK 925
            GYDARHRVALRLLATWLD++W  +EAME+MVA SAMAL                +W+KWK
Sbjct: 241  GYDARHRVALRLLATWLDIQWKKVEAMEIMVACSAMALSKEQASKEEETQSPKSQWTKWK 300

Query: 926  RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLGTLVPVIXXXXXXXXXXXXXXX 1105
            R                                  PTLGT++PVI               
Sbjct: 301  RGGIIGAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTV 360

Query: 1106 XXXXXXXXXXXXXXXXLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLVSGLAFEEQ 1285
                            LTGSKMARRTG VDEFEFK +GENHNQGRLAV +LVSG  F+E+
Sbjct: 361  AGSVAIAASFGAAGAGLTGSKMARRTGSVDEFEFKAIGENHNQGRLAVEILVSGFVFQEE 420

Query: 1286 DFIRPWEGQKDNLERYALQWESKNLIAVSTAIQDWLTSRLAMELMRQGXXXXXXXXXXXX 1465
            DFI PWEGQ +NLERYALQWESKNLIAVSTAIQDWLTS +A+ +M+QG            
Sbjct: 421  DFISPWEGQNNNLERYALQWESKNLIAVSTAIQDWLTSSIALSMMKQGAMLTVLSTLMTA 480

Query: 1466 XXXXXXXXXXXDFIDSKWSIAVDRSDKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFK 1645
                       DFIDSKW+IA+DRSDKAGKLLAEVL KGLQGNRPVTL+G+SLGARVIFK
Sbjct: 481  LAWPATLLAATDFIDSKWTIALDRSDKAGKLLAEVLQKGLQGNRPVTLVGYSLGARVIFK 540

Query: 1646 CLQCLAKMDDNAGVVERVILLGAPISITDENWGIARKMVAGRFVNAYATS 1795
            CLQ LA+ + NA +VERV+LLGAPIS  DENW +ARKMVAGRFVNA++T+
Sbjct: 541  CLQYLAETEQNAELVERVVLLGAPISFRDENWEVARKMVAGRFVNAFSTN 590


>ref|XP_004164664.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
            4-like [Cucumis sativus]
          Length = 673

 Score =  545 bits (1403), Expect = e-152
 Identities = 303/585 (51%), Positives = 360/585 (61%), Gaps = 5/585 (0%)
 Frame = +2

Query: 56   LSPTHRYXXXXXXXXXXNQAQIHQTRPLGSEYQD---EERIXXXXXXXXXXX-EDPQLWV 223
            L+PT RY          +QAQIHQTRPLG    D   EER             EDP+LWV
Sbjct: 20   LAPTQRYATGALFALALHQAQIHQTRPLGFSDDDARAEERTSSCSGSSSDSVSEDPELWV 79

Query: 224  HESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDGETSSERMDQEHA 403
            HESS LLRPVFR+LEID  AW GLEET GS  AKHHIGAFLR+LSED E SSE ++QE A
Sbjct: 80   HESSALLRPVFRFLEIDSAAWSGLEETAGSGTAKHHIGAFLRLLSEDNENSSEMIEQELA 139

Query: 404  LSNGVDAMAMSMENAISSKESRLAYKP-EHLGNXXXXXXXXXXXXVQGSSEDAVVSCSKE 580
            LS  VDA+  +ME  I S +S+  Y+  E                 + + +      S  
Sbjct: 140  LSKSVDAIEENMEKNIISSQSKEKYREYEDEWREKCLPAEAKSKFEEFNKQTESTDGSVV 199

Query: 581  LSEAADGPAGILFEEPVEEIMLLSHHRKVAVLYELLSGCLANMPEDKKKHSRLRKGYDAR 760
            + +  DG      E+P+EE  +LSH RKV +LYELLS CLA++  +KK+ SR RKGYDAR
Sbjct: 200  VKQPDDGAWNEAIEQPIEEEKMLSHQRKVVILYELLSACLADISVNKKQ-SRQRKGYDAR 258

Query: 761  HRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXXXXKWSKWKRXXXX 940
            HR+ALRLL+TW+D+KW+ MEA+E MVA SAMAL                 W KWKR    
Sbjct: 259  HRLALRLLSTWIDIKWMKMEAIETMVACSAMALAKSVAEMGEESPTKESNWDKWKRGGII 318

Query: 941  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLGTLVPVIXXXXXXXXXXXXXXXXXXXX 1120
                                          PTLGT++PVI                    
Sbjct: 319  GAAALTGGTLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVAGSVA 378

Query: 1121 XXXXXXXXXXXLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLVSGLAFEEQDFIRP 1300
                       LTG+KMARR G VDEFEFK +GENHNQGRLAV + VSG AF+++DF+RP
Sbjct: 379  VAASFGAAGAGLTGTKMARRIGSVDEFEFKAIGENHNQGRLAVEITVSGFAFDDKDFVRP 438

Query: 1301 WEGQKDNLERYALQWESKNLIAVSTAIQDWLTSRLAMELMRQGXXXXXXXXXXXXXXXXX 1480
            WEG  DNLERYALQWESKN+IAVSTAIQDWLTSRLAMELM++G                 
Sbjct: 439  WEGLTDNLERYALQWESKNIIAVSTAIQDWLTSRLAMELMKRGAMMTVLSSLLVALAWPA 498

Query: 1481 XXXXXXDFIDSKWSIAVDRSDKAGKLLAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCL 1660
                  DFIDSKW+IAVDRSDKAG++LA+VL KGLQGNRPVTL+G+SLGARVIFKCLQ L
Sbjct: 499  TLLAATDFIDSKWTIAVDRSDKAGRILADVLLKGLQGNRPVTLVGYSLGARVIFKCLQYL 558

Query: 1661 AKMDDNAGVVERVILLGAPISITDENWGIARKMVAGRFVNAYATS 1795
            A+ + NA +VE+V+LLGAPISI D+NW  ARKMVAGRFVN Y+T+
Sbjct: 559  AETEKNAELVEKVVLLGAPISIKDQNWEAARKMVAGRFVNVYSTN 603


>ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|222853743|gb|EEE91290.1|
            predicted protein [Populus trichocarpa]
          Length = 681

 Score =  537 bits (1383), Expect = e-150
 Identities = 305/596 (51%), Positives = 361/596 (60%), Gaps = 17/596 (2%)
 Frame = +2

Query: 56   LSPTHRYXXXXXXXXXXNQAQIHQTRPLGSEYQDEER--------IXXXXXXXXXXXEDP 211
            LS T RY          +QAQIHQTRPLG  + D E+                    EDP
Sbjct: 13   LSRTQRYAAGALFAIALHQAQIHQTRPLGLFHDDSEQEERTSCSSSHSNGSSSDSVSEDP 72

Query: 212  QLWVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDG----ETSS 379
             LW+HE+SGLLRPVFR+LE++ +AW GLEET G SPAKHH+GAFLR+LSE+      +SS
Sbjct: 73   DLWIHENSGLLRPVFRFLEVESVAWTGLEETAGGSPAKHHVGAFLRLLSEESGDASSSSS 132

Query: 380  ERMDQEHALSNGVDAMAMSM-ENAISS---KESRLAYKPEHLGNXXXXXXXXXXXXVQGS 547
            +  DQE ALS  VD M  +M  N +SS   KE    Y+ +                V+  
Sbjct: 133  QSSDQEFALSKAVDVMEETMGANPVSSQSKKEKHKEYETQCREKLSAGSEVKSTSEVEND 192

Query: 548  S-EDAVVSCSKELSEAADGPAGILFEEPVEEIMLLSHHRKVAVLYELLSGCLANMPEDKK 724
            S + A    S ++S+A       + EEPVEE  +LS+ RKV VLYE+LS CLA+  E+ K
Sbjct: 193  SPKTAKDDHSADVSDAPRDSGHNVDEEPVEEEKMLSNQRKVTVLYEILSACLADRREENK 252

Query: 725  KHSRLRKGYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXXXX 904
            K +R R GYDARHRVALRLLATWLD+KW  MEA+E+MVA SAMA+               
Sbjct: 253  KCTRKRNGYDARHRVALRLLATWLDIKWTKMEAIELMVACSAMAVAKEEASKEETKSPKS 312

Query: 905  XKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLGTLVPVIXXXXXXXX 1084
             KW+KWKR                                  PTLGT++PVI        
Sbjct: 313  -KWAKWKRGGIIGAAAITGGTLLAITGGLAAPAIAAGFGALAPTLGTIIPVIGASGFAAA 371

Query: 1085 XXXXXXXXXXXXXXXXXXXXXXXLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVLVS 1264
                                   L G+KMARRTG VDEFEFK VG+NHNQGRLAVG++VS
Sbjct: 372  ASAAGTVAGSVAVAASFGAAGAGLAGTKMARRTGSVDEFEFKAVGDNHNQGRLAVGIMVS 431

Query: 1265 GLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAVSTAIQDWLTSRLAMELMRQGXXXXX 1444
            G  F+E+DFI+PWEGQ DNLERYAL WE KNLIAVSTAIQDWLTSR+AME MRQG     
Sbjct: 432  GCVFDEEDFIKPWEGQNDNLERYALHWEPKNLIAVSTAIQDWLTSRIAMEFMRQGAMLTV 491

Query: 1445 XXXXXXXXXXXXXXXXXXDFIDSKWSIAVDRSDKAGKLLAEVLSKGLQGNRPVTLIGFSL 1624
                              DFIDSKW+IA+DRSDKAGKLLAEVL KGLQGNRPVTL+G+SL
Sbjct: 492  LSTLLVALAWPATLLAATDFIDSKWTIAIDRSDKAGKLLAEVLLKGLQGNRPVTLVGYSL 551

Query: 1625 GARVIFKCLQCLAKMDDNAGVVERVILLGAPISITDENWGIARKMVAGRFVNAYAT 1792
            GARVIFKCL+ LA+ + +A VVERV+LLGAPISI D+ W  ARKMVAGRFVNAY+T
Sbjct: 552  GARVIFKCLETLAETEHSAEVVERVVLLGAPISIKDQKWEAARKMVAGRFVNAYST 607


>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
            gi|223526263|gb|EEF28578.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 713

 Score =  529 bits (1362), Expect = e-147
 Identities = 306/619 (49%), Positives = 365/619 (58%), Gaps = 39/619 (6%)
 Frame = +2

Query: 56   LSPTHRYXXXXXXXXXXNQAQIHQTRPLG---------SEYQDEERIXXXXXXXXXXXED 208
            LSPT RY          +QAQ HQTRPLG          + Q +              ED
Sbjct: 25   LSPTQRYAAGALFAIALHQAQTHQTRPLGFSPDVDPTEPQQQGDRTSCSSSNSSDSVSED 84

Query: 209  PQLWVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDGE-----T 373
            P LWVHE+ GLLRPVFR+LEID  AW GLEET GSSPAK+H+GAFLR+L+E+ +     +
Sbjct: 85   PDLWVHETLGLLRPVFRFLEIDSNAWHGLEETAGSSPAKYHVGAFLRLLAENNDDDNASS 144

Query: 374  SSERMDQEHALSNGVDAMAMSMENAI----SSKESRLAYK---PEHLGNXXXXXXXXXXX 532
            S    DQE ALS  VD M+ +ME A     S KE    Y+    E L N           
Sbjct: 145  SQSSSDQELALSKAVDVMSQNMETATVSFQSKKEKHKEYEYECREKLSNNEVQSDNEAAK 204

Query: 533  XVQGSSEDAVVSCS-----------KELSEAADGPAGILF------EEPVEEIMLLSHHR 661
             +  +++++    S           KE  E      G+L       E+P+EE  +LS+ R
Sbjct: 205  ELLETAQESREKLSSAQVELNSDVAKESVETLKERDGVLVGVSGVDEKPIEEEKMLSYPR 264

Query: 662  KVAVLYELLSGCLANMPEDK-KKHSRLRKGYDARHRVALRLLATWLDVKWINMEAMEVMV 838
            K+AVLYE+LSGCLA+  ED  KK++R RKGYDARHRVALRLLATWLD+KWI MEA+E ++
Sbjct: 265  KIAVLYEILSGCLADKREDNNKKYTRRRKGYDARHRVALRLLATWLDIKWIQMEAIETII 324

Query: 839  AFSAMALMXXXXXXXXXXXXXXXKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1018
            A SAMA+                KW+KWKR                              
Sbjct: 325  ACSAMAVAKEEESKEEASHSTKSKWAKWKRGGIIGAAAITGGTLLAITGGLAAPAIAAGF 384

Query: 1019 XXXXPTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTGSKMARRTGGVDE 1198
                PTLGTL+PVI                               L G+KMARRTG VDE
Sbjct: 385  GALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLAGTKMARRTGNVDE 444

Query: 1199 FEFKPVGENHNQGRLAVGVLVSGLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAVSTA 1378
            FEFK +GENHNQGRLAV +LVSG  F+E+DFIRPWEGQ DNLERY LQWESKNLIAVSTA
Sbjct: 445  FEFKAIGENHNQGRLAVEILVSGFVFDEEDFIRPWEGQIDNLERYVLQWESKNLIAVSTA 504

Query: 1379 IQDWLTSRLAMELMRQGXXXXXXXXXXXXXXXXXXXXXXXDFIDSKWSIAVDRSDKAGKL 1558
            IQDWLTS +A+ LM+QG                       DFIDS+WS+A+DRSDKAGKL
Sbjct: 505  IQDWLTSSIALGLMKQGAMMTVLSTLLAALAWPATLLAATDFIDSRWSVAIDRSDKAGKL 564

Query: 1559 LAEVLSKGLQGNRPVTLIGFSLGARVIFKCLQCLAKMDDNAGVVERVILLGAPISITDEN 1738
            LAEVL KGLQGNRPVTL+G+SLGARVIFKCL+ LA+ + NA VVERV+LLGAPISI +E 
Sbjct: 565  LAEVLLKGLQGNRPVTLVGYSLGARVIFKCLETLAETERNAEVVERVVLLGAPISIKNEK 624

Query: 1739 WGIARKMVAGRFVNAYATS 1795
            W  ARK+VAGRFVNAY+T+
Sbjct: 625  WAAARKVVAGRFVNAYSTN 643


>ref|NP_001078500.2| uncharacterized protein [Arabidopsis thaliana]
            gi|332661235|gb|AEE86635.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 672

 Score =  524 bits (1350), Expect = e-146
 Identities = 300/599 (50%), Positives = 361/599 (60%), Gaps = 19/599 (3%)
 Frame = +2

Query: 56   LSPTHRYXXXXXXXXXXNQAQIHQTRPLGS------EYQDEERIXXXXXXXXXXXEDPQL 217
            L+PT RY          NQAQI+QT+PLG+      +  DEER            +DP L
Sbjct: 8    LTPTQRYAAGALFAIALNQAQINQTQPLGTPAAEDDDGGDEER-RSNCSSGDSVSDDPSL 66

Query: 218  WVHESSGLLRPVFRYLEIDPIAWLGLEETGGSSPAKHHIGAFLRVLSEDG-ETSSERMDQ 394
            WVHE+SGLLRPVFR LEID  AWLGLE+T  SSPAKHHIGAF R+LSE+  + S+E ++Q
Sbjct: 67   WVHETSGLLRPVFRCLEIDSPAWLGLEQTACSSPAKHHIGAFTRLLSEEANDASAEMVEQ 126

Query: 395  EHALSNGVDAMAMSMENAIS---SKESRLAYKPEHLGNXXXXXXXXXXXXV--QGSSEDA 559
            E AL+   DAM  S++ ++S    KE    Y+ E                +  +   ++A
Sbjct: 127  EMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECREKYAVPEVKSKDVDLDKEKDKKEA 186

Query: 560  VVSCSKELSEAA----DG---PAGILFEEPVEEIMLLSHHRKVAVLYELLSGCLANMPED 718
              S ++E  EA     DG   P  +  E+ VEE+ LLSH RK+ VLYELLS CL++   +
Sbjct: 187  AESAAREGLEAGVVIIDGSHKPEVLENEKSVEEVTLLSHQRKINVLYELLSACLSDKHHE 246

Query: 719  KKKHSRLRKGYDARHRVALRLLATWLDVKWINMEAMEVMVAFSAMALMXXXXXXXXXXXX 898
             KK  R RKGYDARHRVALRLLATW +++WI +EA+E MVA SAMA+             
Sbjct: 247  DKKCKRCRKGYDARHRVALRLLATWFNIEWIKVEAIETMVACSAMAIQKSAEMKGEDNLT 306

Query: 899  XXXKWSKWKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLGTLVPVIXXXXXX 1078
                W+KWKR                                  PTLGT++PVI      
Sbjct: 307  PTTSWAKWKRGGIIGAAAITGGTLMAITGGLAAPAIAAGFGALAPTLGTIIPVIGAGGFA 366

Query: 1079 XXXXXXXXXXXXXXXXXXXXXXXXXLTGSKMARRTGGVDEFEFKPVGENHNQGRLAVGVL 1258
                                     LTG+KMARR G +DEFEFK +GENHNQGRLAV VL
Sbjct: 367  AAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRIGDLDEFEFKAIGENHNQGRLAVEVL 426

Query: 1259 VSGLAFEEQDFIRPWEGQKDNLERYALQWESKNLIAVSTAIQDWLTSRLAMELMRQGXXX 1438
            V+G+ FEE+DF++PWEG   NLERY LQWESKNLI VSTAIQDWLTSRLAMELM+QG   
Sbjct: 427  VAGVVFEEEDFVKPWEGLTSNLERYTLQWESKNLILVSTAIQDWLTSRLAMELMKQGAMH 486

Query: 1439 XXXXXXXXXXXXXXXXXXXXDFIDSKWSIAVDRSDKAGKLLAEVLSKGLQGNRPVTLIGF 1618
                                DFIDSKWSIA+DRSDKAG+LLAEVL KGLQGNRP+TL+GF
Sbjct: 487  TVLASLLMALAWPATILVAADFIDSKWSIAIDRSDKAGRLLAEVLQKGLQGNRPITLVGF 546

Query: 1619 SLGARVIFKCLQCLAKMDDNAGVVERVILLGAPISITDENWGIARKMVAGRFVNAYATS 1795
            SLGARVIFKCLQ LA+ + NA +VERV+LLGAPISI  ENW   RKMVAGRF+N YAT+
Sbjct: 547  SLGARVIFKCLQALAETEQNAELVERVVLLGAPISINSENWRDVRKMVAGRFINVYATN 605


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