BLASTX nr result

ID: Coptis25_contig00016697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016697
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1...   443   e-122
ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vi...   437   e-120
gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]       436   e-120
emb|CBI22219.3| unnamed protein product [Vitis vinifera]              422   e-116
gb|ADL36762.1| MYB domain class transcription factor [Malus x do...   420   e-115

>ref|XP_002283575.1| PREDICTED: myb-related protein 306 isoform 1 [Vitis vinifera]
          Length = 327

 Score =  443 bits (1139), Expect = e-122
 Identities = 237/340 (69%), Positives = 266/340 (78%), Gaps = 5/340 (1%)
 Frame = -2

Query: 1262 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1083
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1082 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 903
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 902  TG--LDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 729
            TG   DG +RD     Q+I++GQWERRLQTDIH AK+AL EALSL+ KP+SS    L  +
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHSSS-DQLNPT 178

Query: 728  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 549
            NGY + TR   P Q+ +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 179  NGYQTCTR---PGQASSYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 234

Query: 548  SSREGTPSAENNNEIVSQGAFDSLL---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 378
            +S EGTPSA NN +I    A++ L    +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 235  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 290

Query: 377  ETPVPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 258
               VPLS LEKWLFEE    Q  EDL     SLD+S + F
Sbjct: 291  SDQVPLSFLEKWLFEEG-GAQGKEDLTD--ISLDESPDFF 327


>ref|XP_002284926.1| PREDICTED: myb-related protein 306 [Vitis vinifera]
          Length = 307

 Score =  437 bits (1123), Expect = e-120
 Identities = 228/337 (67%), Positives = 254/337 (75%), Gaps = 2/337 (0%)
 Frame = -2

Query: 1262 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1083
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1082 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 903
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 902  TGLDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 723
            TG+D  N+DGFS    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 722  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 543
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 542  REGTPSAENNNEIVSQGAFDSLLALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 369
               TP            A DSL + NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 368  VPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 258
            VPL+++EKWLF+E    Q  EDL+    SL+D+  LF
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLID--MSLEDTAQLF 307


>gb|ABK59040.1| R2R3 Myb30 transcription factor [Vitis vinifera]
          Length = 307

 Score =  436 bits (1120), Expect = e-120
 Identities = 227/337 (67%), Positives = 254/337 (75%), Gaps = 2/337 (0%)
 Frame = -2

Query: 1262 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1083
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQ+HGPGNWRAVPT+TGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQDHGPGNWRAVPTSTGLLRCSKSCRLRWTNY 60

Query: 1082 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 903
            LRPGIKRGNFTD EEK IIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+K  
Sbjct: 61   LRPGIKRGNFTDQEEKTIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFP 120

Query: 902  TGLDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKASNG 723
            TG+D  N+DGFS    I+KGQWERRLQTDIH AK+ALCEALS+D    SS L DLK+SNG
Sbjct: 121  TGVDDHNQDGFS----ISKGQWERRLQTDIHMAKQALCEALSID---TSSSLPDLKSSNG 173

Query: 722  YYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDSSS 543
            Y   TR   PVQ+ TYASS ENI++LLEGWM N+PK   TNSE TQ S N+  G T    
Sbjct: 174  YNPNTR---PVQASTYASSAENIAKLLEGWMRNSPKSTRTNSEATQNSKNSSEGAT---- 226

Query: 542  REGTPSAENNNEIVSQGAFDSLLALNSSTPDVSPS--MSLDDSTENSFFQDESKPNFETP 369
               TP            A DSL + NSS  D+S S   + + + E   FQDESKPN ET 
Sbjct: 227  ---TPD-----------ALDSLFSFNSSNSDLSLSNDETANFTPETILFQDESKPNLETQ 272

Query: 368  VPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 258
            VPL+++EKWLF+E    Q  EDL+    SL+D+  LF
Sbjct: 273  VPLTMIEKWLFDEGAATQEQEDLID--MSLEDTAQLF 307


>emb|CBI22219.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  422 bits (1086), Expect = e-116
 Identities = 228/340 (67%), Positives = 255/340 (75%), Gaps = 5/340 (1%)
 Frame = -2

Query: 1262 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1083
            MGRPPCCDK+GVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 60

Query: 1082 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 903
            LRPGIKRGNFTDHEE+MIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEERMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 902  TG--LDGQNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPNSSCLSDLKAS 729
            TG   DG +RD     Q+I++GQWERRLQTDIH AK+AL EALSL+ KP++S        
Sbjct: 121  TGSSSDGHSRDVSLASQSISRGQWERRLQTDIHMAKQALHEALSLE-KPHTS-------- 171

Query: 728  NGYYSLTRPIQPVQSGTYASSTENISRLLEGWMANAPKQAETNSETTQYSFNNVNGTTDS 549
                            +YASSTENI+RLLEGWM N+PKQA  +S TTQ SF N  G TDS
Sbjct: 172  ----------------SYASSTENIARLLEGWMRNSPKQARASSATTQNSFINTAG-TDS 214

Query: 548  SSREGTPSAENNNEIVSQGAFDSLL---ALNSSTPDVSPSMSLDDSTENSFFQDESKPNF 378
            +S EGTPSA NN +I    A++ L    +L+SS  ++S S     S E SFFQ+ESKP+ 
Sbjct: 215  TSSEGTPSAANNEDIELTEAYEMLFGFDSLDSSNSEISQS----KSPEASFFQEESKPDL 270

Query: 377  ETPVPLSLLEKWLFEENILGQSHEDLMHEISSLDDSLNLF 258
               VPLS LEKWLFEE    Q  EDL     SLD+S + F
Sbjct: 271  SDQVPLSFLEKWLFEEG-GAQGKEDLTD--ISLDESPDFF 307


>gb|ADL36762.1| MYB domain class transcription factor [Malus x domestica]
          Length = 374

 Score =  420 bits (1080), Expect = e-115
 Identities = 237/382 (62%), Positives = 270/382 (70%), Gaps = 47/382 (12%)
 Frame = -2

Query: 1262 MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNY 1083
            MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWR+VPTNTGLLRCSKSCRLRWTNY
Sbjct: 1    MGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNY 60

Query: 1082 LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLRKLQ 903
            LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKL+KLQ
Sbjct: 61   LRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQ 120

Query: 902  TGLDG----QNRDGFSTFQTITKGQWERRLQTDIHTAKKALCEALSLDNKPN-------- 759
            TGLDG     ++DG S  Q I+KGQWERRLQTDIH AK+ALCEALS+D KPN        
Sbjct: 121  TGLDGHDHHNHQDGNSHDQPISKGQWERRLQTDIHMAKQALCEALSID-KPNVISTTTVS 179

Query: 758  -SSCLSDLKAS--NGYYSL----TRPIQPVQSGTYASSTENISRLLEGWMANAPKQA--E 606
                L DLK S   G Y++    +   +P  + TYAS+TENI++LLE WM N+PK +  +
Sbjct: 180  HDLHLQDLKPSINIGNYNINDNPSTSTRPHHTSTYASNTENIAKLLENWMKNSPKVSAHQ 239

Query: 605  TNSETTQ----YSFNNVN---------------GTTDSSSREGTPSAENNNEIVSQGAFD 483
            TNS+ T      SFNN N               G + S+S EG  SA    +     AFD
Sbjct: 240  TNSDQTNADQTNSFNNNNNNDNDNKGGATATTRGRSMSTSSEGAHSATTTPD----QAFD 295

Query: 482  SLLALNSSTPDVSPSMSLDDSTEN-------SFFQDESKPNFETPVPLSLLEKWLFEENI 324
            SL + NSS  DVS SMS+D++  N         FQDESKPN E  VPLSLLEKWL ++  
Sbjct: 296  SLFSFNSSPSDVSQSMSVDENNANFIADQASCLFQDESKPNLEGQVPLSLLEKWLLDD-A 354

Query: 323  LGQSHEDLMHEISSLDDSLNLF 258
               +HEDL++   SL++   LF
Sbjct: 355  APHAHEDLIN--ISLENGAGLF 374


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