BLASTX nr result

ID: Coptis25_contig00016696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016696
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271111.1| PREDICTED: uncharacterized protein LOC100251...   175   9e-58
ref|XP_002330214.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-56
gb|AEH05972.1| translationally controlled tumor protein [Hevea b...   166   8e-56
gb|ACI04518.1| translationally controlled tumor protein [Hevea b...   164   2e-55
ref|XP_002283842.1| PREDICTED: translationally-controlled tumor ...   164   3e-55

>ref|XP_002271111.1| PREDICTED: uncharacterized protein LOC100251175 isoform 1 [Vitis
           vinifera] gi|147837146|emb|CAN63631.1| hypothetical
           protein VITISV_009947 [Vitis vinifera]
           gi|297736844|emb|CBI26045.3| unnamed protein product
           [Vitis vinifera]
          Length = 167

 Score =  175 bits (443), Expect(2) = 9e-58
 Identities = 86/97 (88%), Positives = 90/97 (92%)
 Frame = +2

Query: 2   AVDFDIGANPSAEGGDEEGVDDTAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTP 181
           A+D DIGANPSAEGG+EEGVDD  VKVVDIVDTFRLQEQP FDKKQFVTYMKRYIKLLTP
Sbjct: 40  AIDVDIGANPSAEGGEEEGVDDQTVKVVDIVDTFRLQEQPPFDKKQFVTYMKRYIKLLTP 99

Query: 182 KLEGEKQEEFKKNIEGATKSLLPKIRELQFFVGESMH 292
           KLEGEKQEEFKKNIEGATK LL K+ +LQFFVGESMH
Sbjct: 100 KLEGEKQEEFKKNIEGATKFLLSKLSDLQFFVGESMH 136



 Score = 75.5 bits (184), Expect(2) = 9e-58
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 376 FVGESMHDDASMVFAYYREGATDPTFLYFAHALKEIKC 489
           FVGESMHDD S+VFAYY++GATDPTFLYF H LKEIKC
Sbjct: 130 FVGESMHDDGSLVFAYYKDGATDPTFLYFGHGLKEIKC 167


>ref|XP_002330214.1| predicted protein [Populus trichocarpa] gi|222871670|gb|EEF08801.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  170 bits (430), Expect(2) = 3e-56
 Identities = 82/97 (84%), Positives = 90/97 (92%)
 Frame = +2

Query: 2   AVDFDIGANPSAEGGDEEGVDDTAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLTP 181
           ++D DIGANPSAEGGD+EGVDD AVKVVDIVDTFRLQEQPAFDKKQFVTY+KRYIKLLTP
Sbjct: 40  SIDVDIGANPSAEGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKLLTP 99

Query: 182 KLEGEKQEEFKKNIEGATKSLLPKIRELQFFVGESMH 292
           KLE E+QE FKKNIEGATK L PK+++ QFFVGESMH
Sbjct: 100 KLEPEQQEVFKKNIEGATKFLFPKLKDFQFFVGESMH 136



 Score = 75.5 bits (184), Expect(2) = 3e-56
 Identities = 32/38 (84%), Positives = 35/38 (92%)
 Frame = +1

Query: 376 FVGESMHDDASMVFAYYREGATDPTFLYFAHALKEIKC 489
           FVGESMHDD S+V AYY+EGATDPTFLYFAH LKE+KC
Sbjct: 130 FVGESMHDDCSLVLAYYKEGATDPTFLYFAHGLKEVKC 167


>gb|AEH05972.1| translationally controlled tumor protein [Hevea brasiliensis]
           gi|392514569|gb|AFM77714.1| TCTP.1 [Hevea brasiliensis]
          Length = 168

 Score =  166 bits (419), Expect(2) = 8e-56
 Identities = 85/98 (86%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   AVDFDIGANPSAEGGDE-EGVDDTAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLT 178
           AVD DIGANPSAEG DE EGVDD AVKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLT
Sbjct: 40  AVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT 99

Query: 179 PKLEGEKQEEFKKNIEGATKSLLPKIRELQFFVGESMH 292
           PKL+ EKQE FKKNIEGATK LL K+ +LQFFVGESMH
Sbjct: 100 PKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMH 137



 Score = 78.2 bits (191), Expect(2) = 8e-56
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +1

Query: 376 FVGESMHDDASMVFAYYREGATDPTFLYFAHALKEIKC 489
           FVGESMHDD S+VFAYYREGATDPTFLYFA+ALKE+KC
Sbjct: 131 FVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168


>gb|ACI04518.1| translationally controlled tumor protein [Hevea brasiliensis]
          Length = 168

 Score =  164 bits (415), Expect(2) = 2e-55
 Identities = 84/98 (85%), Positives = 88/98 (89%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   AVDFDIGANPSAEGGDE-EGVDDTAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLT 178
           AVD DIGANPSAEG DE EGVDD  VKVVDIVDTFRLQEQPAFDKKQFVTYMKR+IKLLT
Sbjct: 40  AVDVDIGANPSAEGADEDEGVDDQVVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLT 99

Query: 179 PKLEGEKQEEFKKNIEGATKSLLPKIRELQFFVGESMH 292
           PKL+ EKQE FKKNIEGATK LL K+ +LQFFVGESMH
Sbjct: 100 PKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMH 137



 Score = 78.2 bits (191), Expect(2) = 2e-55
 Identities = 34/38 (89%), Positives = 37/38 (97%)
 Frame = +1

Query: 376 FVGESMHDDASMVFAYYREGATDPTFLYFAHALKEIKC 489
           FVGESMHDD S+VFAYYREGATDPTFLYFA+ALKE+KC
Sbjct: 131 FVGESMHDDGSLVFAYYREGATDPTFLYFAYALKEVKC 168


>ref|XP_002283842.1| PREDICTED: translationally-controlled tumor protein homolog isoform
           1 [Vitis vinifera]
          Length = 197

 Score =  164 bits (414), Expect(2) = 3e-55
 Identities = 84/98 (85%), Positives = 90/98 (91%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   AVDFDIGANPSAEGGDE-EGVDDTAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRYIKLLT 178
           AVD DIGANPSAEGG E EGV+D AVKVVDIVDTFRLQEQP+FDKKQFVT+MKRYIKLLT
Sbjct: 69  AVDVDIGANPSAEGGGEDEGVEDQAVKVVDIVDTFRLQEQPSFDKKQFVTFMKRYIKLLT 128

Query: 179 PKLEGEKQEEFKKNIEGATKSLLPKIRELQFFVGESMH 292
           PKLE EKQE FKK+IEGATK LLPK+ +LQFFVGESMH
Sbjct: 129 PKLEPEKQELFKKHIEGATKFLLPKLSDLQFFVGESMH 166



 Score = 78.2 bits (191), Expect(2) = 3e-55
 Identities = 34/38 (89%), Positives = 36/38 (94%)
 Frame = +1

Query: 376 FVGESMHDDASMVFAYYREGATDPTFLYFAHALKEIKC 489
           FVGESMHDD S+VFAYY+EGATDPTFLYFAH LKEIKC
Sbjct: 160 FVGESMHDDGSLVFAYYKEGATDPTFLYFAHGLKEIKC 197


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