BLASTX nr result

ID: Coptis25_contig00016687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016687
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloro...   135   3e-30
gb|AFK45062.1| unknown [Lotus japonicus]                              130   1e-28
ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, c...   128   4e-28
ref|XP_002525198.1| conserved hypothetical protein [Ricinus comm...   127   7e-28
ref|XP_002334170.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28

>ref|XP_002273449.1| PREDICTED: UPF0308 protein At2g37240, chloroplastic [Vitis
           vinifera] gi|297741495|emb|CBI32627.3| unnamed protein
           product [Vitis vinifera] gi|342160850|gb|AEL16461.1|
           type II peroxiredoxin 2 [Vitis vinifera]
          Length = 254

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/95 (67%), Positives = 77/95 (81%)
 Frame = -3

Query: 286 RITVLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFG 107
           R+   +A+S  PG  S+ +S+DT +LL++  VFDLNGN   ISDLWKDRKA+VAFARHFG
Sbjct: 51  RVITASAASGSPGIESSTVSDDTTNLLDRAQVFDLNGNGIPISDLWKDRKAVVAFARHFG 110

Query: 106 CVLCRKRADYLASVKDKMDAAGVTLILIGPGSIDQ 2
           CV CRKRAD LAS KD+MDA+GV L+LIGPGSIDQ
Sbjct: 111 CVFCRKRADLLASQKDRMDASGVALVLIGPGSIDQ 145


>gb|AFK45062.1| unknown [Lotus japonicus]
          Length = 256

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/96 (67%), Positives = 73/96 (76%)
 Frame = -3

Query: 289 NRITVLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHF 110
           NR    T  S   G  S ++SEDT   L+ V VFDLNGN   ISDLWKDRKA+VAFARHF
Sbjct: 52  NRHHATTLPSASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHF 111

Query: 109 GCVLCRKRADYLASVKDKMDAAGVTLILIGPGSIDQ 2
           GCVLCRKRADYLA+ KD MDA+GV L+LIGPGS+DQ
Sbjct: 112 GCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVDQ 147


>ref|XP_004142104.1| PREDICTED: thioredoxin-like protein AAED1, chloroplastic-like
           [Cucumis sativus] gi|449521503|ref|XP_004167769.1|
           PREDICTED: thioredoxin-like protein AAED1,
           chloroplastic-like [Cucumis sativus]
          Length = 258

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/92 (69%), Positives = 72/92 (78%)
 Frame = -3

Query: 277 VLTASSNPPGNASTLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFGCVL 98
           V++A S  PG  S + S +T  LL  V VFDLNGN   ISDLWKDRKA+VAFARHFGCV 
Sbjct: 58  VVSAISGSPGIGSYVESGNTADLLESVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVF 117

Query: 97  CRKRADYLASVKDKMDAAGVTLILIGPGSIDQ 2
           CRKRADYLAS KD +DA+GV L+LIGPGSIDQ
Sbjct: 118 CRKRADYLASKKDLLDASGVALVLIGPGSIDQ 149


>ref|XP_002525198.1| conserved hypothetical protein [Ricinus communis]
           gi|223535495|gb|EEF37164.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 249

 Score =  127 bits (320), Expect = 7e-28
 Identities = 69/120 (57%), Positives = 85/120 (70%), Gaps = 1/120 (0%)
 Frame = -3

Query: 358 KSPFTPPRSIISLKHSYAPFAKRNRITVLTASSNPPG-NASTLISEDTQSLLNKVNVFDL 182
           ++ FTPP   ++ +  Y     R +  V +A S  PG  +S L++ED   LL+ V V DL
Sbjct: 26  RTSFTPP--FLANRQCYRLLQTRQKHIVCSAISGSPGIESSGLVNED---LLDTVKVLDL 80

Query: 181 NGNATVISDLWKDRKALVAFARHFGCVLCRKRADYLASVKDKMDAAGVTLILIGPGSIDQ 2
            GN   ISDLWKDRKA+VAFARHFGCVLCRKRADYLA+ KD MDA+GV L+LIGPGS+DQ
Sbjct: 81  GGNEIPISDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDIMDASGVALVLIGPGSVDQ 140


>ref|XP_002334170.1| predicted protein [Populus trichocarpa] gi|222869935|gb|EEF07066.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/80 (75%), Positives = 70/80 (87%)
 Frame = -3

Query: 241 STLISEDTQSLLNKVNVFDLNGNATVISDLWKDRKALVAFARHFGCVLCRKRADYLASVK 62
           S L+SEDT ++L+ V VFDLNGNA   SDLWKDRKA+VAFARHFGCVLCR+RADYLA+ K
Sbjct: 10  SGLVSEDTTNILDTVEVFDLNGNAIPFSDLWKDRKAVVAFARHFGCVLCRRRADYLAAKK 69

Query: 61  DKMDAAGVTLILIGPGSIDQ 2
           D MDA+GV L+LIGPGS+DQ
Sbjct: 70  DIMDASGVALVLIGPGSVDQ 89


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