BLASTX nr result
ID: Coptis25_contig00016659
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016659 (523 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM1... 92 3e-17 ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sat... 92 3e-17 ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16 ref|XP_002532435.1| protein with unknown function [Ricinus commu... 90 2e-16 ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinif... 89 4e-16 >ref|XP_004154494.1| PREDICTED: LOW QUALITY PROTEIN: protein FAM188A-like [Cucumis sativus] Length = 597 Score = 92.4 bits (228), Expect = 3e-17 Identities = 42/54 (77%), Positives = 46/54 (85%) Frame = -2 Query: 522 LKRIPSILEVGFLILLESLNFCKVGHQLKCPKWPVWVVGSKSHYTILSAFDTSV 361 LK I +EVGFL LLESLNFCKVG LKCPKWP+WVVGS+SHYT+L AFDTSV Sbjct: 351 LKGISKSVEVGFLTLLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLFAFDTSV 404 >ref|XP_004139641.1| PREDICTED: protein FAM188A-like [Cucumis sativus] Length = 607 Score = 92.4 bits (228), Expect = 3e-17 Identities = 42/54 (77%), Positives = 46/54 (85%) Frame = -2 Query: 522 LKRIPSILEVGFLILLESLNFCKVGHQLKCPKWPVWVVGSKSHYTILSAFDTSV 361 LK I +EVGFL LLESLNFCKVG LKCPKWP+WVVGS+SHYT+L AFDTSV Sbjct: 361 LKGISKSVEVGFLTLLESLNFCKVGQYLKCPKWPIWVVGSESHYTVLFAFDTSV 414 >ref|XP_002307495.1| predicted protein [Populus trichocarpa] gi|222856944|gb|EEE94491.1| predicted protein [Populus trichocarpa] Length = 610 Score = 90.1 bits (222), Expect = 2e-16 Identities = 41/54 (75%), Positives = 45/54 (83%) Frame = -2 Query: 522 LKRIPSILEVGFLILLESLNFCKVGHQLKCPKWPVWVVGSKSHYTILSAFDTSV 361 LK I +EVGFL LLESLNFCKVG LKCPKWP+WVVGS+SHYT+L A DTSV Sbjct: 364 LKGISMSVEVGFLTLLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLFALDTSV 417 >ref|XP_002532435.1| protein with unknown function [Ricinus communis] gi|223527855|gb|EEF29950.1| protein with unknown function [Ricinus communis] Length = 603 Score = 89.7 bits (221), Expect = 2e-16 Identities = 40/54 (74%), Positives = 46/54 (85%) Frame = -2 Query: 522 LKRIPSILEVGFLILLESLNFCKVGHQLKCPKWPVWVVGSKSHYTILSAFDTSV 361 LK I + +EVGFL LLESLNFCKVG LKCPKWP+WVVGS+SHYT+L A DT+V Sbjct: 357 LKGISTSVEVGFLTLLESLNFCKVGQHLKCPKWPIWVVGSESHYTVLFALDTTV 410 >ref|XP_002266903.2| PREDICTED: protein FAM188A-like [Vitis vinifera] Length = 337 Score = 89.0 bits (219), Expect = 4e-16 Identities = 40/54 (74%), Positives = 46/54 (85%) Frame = -2 Query: 522 LKRIPSILEVGFLILLESLNFCKVGHQLKCPKWPVWVVGSKSHYTILSAFDTSV 361 LK I + +EVGFL LLESLNFCKVG LKCPKWP+WVVGS+SHYT+L A DT+V Sbjct: 89 LKGISTCVEVGFLTLLESLNFCKVGQFLKCPKWPIWVVGSESHYTVLFALDTTV 142