BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016650
         (1795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   263   9e-68
ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-58
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   227   9e-57
ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   224   6e-56
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   222   2e-55

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
            vinifera] gi|147843962|emb|CAN83712.1| hypothetical
            protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  263 bits (673), Expect = 9e-68
 Identities = 163/367 (44%), Positives = 196/367 (53%), Gaps = 8/367 (2%)
 Frame = +2

Query: 35   VLPYATAQGSHSSLPTPTQSFKPSMTVTIVVLSVACVIXXXXXXXXXXXXXXXXXXXXXX 214
            +LP+A AQ   S+ P   Q F  SM + IV+L  A  +                      
Sbjct: 40   LLPFAGAQSDTSNDPYQQQRFSSSMAIIIVILVAALFLMGFFSVYIRHCSDSRNGGSIRA 99

Query: 215  XXXXXXXXXXXXXXXRLTRTRTWPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVC 394
                            L R+R     RGLD  ++ETFPTF YSVVKGLKIGK VLECAVC
Sbjct: 100  AAGAA-----------LGRSRR--GTRGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVC 146

Query: 395  LNEFEEDETLRLLPQCNHVFHPECIDAWLTSHTTCPVCRANL-------EVHSPSEATQV 553
            LNEFE++ETLRL+P+C+HVFHPECIDAWL SH TCPVCRANL       +  +  EA + 
Sbjct: 147  LNEFEDNETLRLIPKCDHVFHPECIDAWLASHVTCPVCRANLTEPAVPTDYSAAVEAAES 206

Query: 554  PGLLAEENLATPEVSESQTQVLIQVVDGEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTR 733
             G    +         +  +V I+V D E +    PDVINP   N    QNRP RSKSTR
Sbjct: 207  AGESDHDGEDRRSEINAVREVSIRVADDETDVQQAPDVINP---NQSLHQNRPPRSKSTR 263

Query: 734  KGIAGIAGRFPRSHSTGHSLVQPGGNYERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQG 913
                    +FPRSHSTGHSL+QPG N ER+TLKLP+DVRKQI+   L RTTS +  PR G
Sbjct: 264  ------PRKFPRSHSTGHSLIQPGENCERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDG 317

Query: 914  SV-SGWSATXXXXXXXXXXXXXHQLGPFDRAGKSDRWGFSIAPPFFWRNXXXXXXKKGGD 1090
            S   G+                 +L   +R+GKSDRW FSI PPFF R       K   D
Sbjct: 318  SSRQGYRTAGEGSSRGKNFRRFDRL---ERSGKSDRWTFSITPPFFSRASSLKSPKVAAD 374

Query: 1091 ASVSIKT 1111
               +  T
Sbjct: 375  GEATSST 381


>ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|222857937|gb|EEE95484.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  231 bits (590), Expect = 4e-58
 Identities = 133/272 (48%), Positives = 158/272 (58%), Gaps = 11/272 (4%)
 Frame = +2

Query: 272  TRTWPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHV 451
            +R   A RGLDP +IETFPT +YSVVKGLKIGK  LECAVCLNEFE+DETLRL+P C+HV
Sbjct: 80   SRRAAASRGLDPGVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEDDETLRLIPNCDHV 139

Query: 452  FHPECIDAWLTSHTTCPVCRANL-----------EVHSPSEATQVPGLLAEENLATPEVS 598
            FHP+CIDAWL SHTTCPVCRA+L           E+HSP        L A+      E  
Sbjct: 140  FHPDCIDAWLESHTTCPVCRADLTKPADTVSQLSELHSPE-----LDLEAQNGALGIEPE 194

Query: 599  ESQTQVLIQVVDGEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGIAGRFPRSHS 778
                 V +QVV  E      PD ++  V       N+ +    TR   +G   RFPRSHS
Sbjct: 195  NGNANVEVQVVGPE------PDDVSVNV-------NKTLNRNRTRGSRSGRPPRFPRSHS 241

Query: 779  TGHSLVQPGGNYERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXXXX 958
            TGHSLVQPG N +R+TL+LP +VRKQ++N KL R+TS V  PRQGS      T       
Sbjct: 242  TGHSLVQPGENTDRFTLRLPVEVRKQVMNRKLNRSTSMVVLPRQGSSRKGYRTGVGEGSS 301

Query: 959  XXXXXXHQLGPFDRAGKSDRWGFSIAPPFFWR 1054
                   +L   D   +SDRW F   P F  R
Sbjct: 302  RKVLNYKRLEKLDLEPRSDRWVFGRNPSFLAR 333


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  227 bits (578), Expect = 9e-57
 Identities = 132/284 (46%), Positives = 167/284 (58%), Gaps = 5/284 (1%)
 Frame = +2

Query: 275  RTWPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVF 454
            R+W A RGL+ + IE FPTF+YS VK  KIGKE LECAVCLNEFE+DETLRLLP+CNHVF
Sbjct: 107  RSWMAARGLNSSDIERFPTFVYSAVKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVF 166

Query: 455  HPECIDAWLTSHTTCPVCRANLEVHSPSEATQVPG--LLAEENLATPEVSESQTQVLIQV 628
            H +CID WL SH TCPVCRANL        T  PG    A   +  PE    ++   +++
Sbjct: 167  HSDCIDLWLASHVTCPVCRANL--------TPKPGEKFCAPVPIFGPETESDESDTRVEI 218

Query: 629  VDGEQNSDSKPDVINPTVLN-SFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPG 805
            V+         D  +P V+N      NRP RS+S R   A I G FPRSHSTGHSL+QPG
Sbjct: 219  VETPNQVPIAVDAQSPDVMNHGRDTPNRPPRSRSIR---ARITGMFPRSHSTGHSLIQPG 275

Query: 806  GNYERYTLKLPDDVRKQILNGKLTRTTSCVTFPR-QGSVSGWSATXXXXXXXXXXXXXHQ 982
             N ER+TL+LP+++R QI+N  L+RT S V  P  Q S  G+ A               Q
Sbjct: 276  ENRERFTLRLPEEIRNQIMNTSLSRTKSWVALPGVQSSKRGYRANSVGSLRGKTYFNYEQ 335

Query: 983  LGPFDRAGKSDRWGFSIAPPFFWRNXXXXXXK-KGGDASVSIKT 1111
               F+   +++R GFS+ PPF  R         +G + S++ KT
Sbjct: 336  ---FNGEVRAERLGFSMTPPFVPRTGSSHARSPQGCEGSLTPKT 376


>ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 366

 Score =  224 bits (571), Expect = 6e-56
 Identities = 130/267 (48%), Positives = 161/267 (60%), Gaps = 3/267 (1%)
 Frame = +2

Query: 263  LTRTRTWPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQC 442
            LT  R+  A RGLDP LI+TFP   YSVVK  KIGKE LECAVCL EFE+ ETLRLLP+C
Sbjct: 71   LTTARSRRAARGLDPALIQTFPILEYSVVKIHKIGKEALECAVCLCEFEDTETLRLLPKC 130

Query: 443  NHVFHPECIDAWLTSHTTCPVCRANLEVHSPSEA---TQVPGLLAEENLATPEVSESQTQ 613
            +HVFHPECID WL+SHTTCPVCRANL      +A       G++      T ++ ESQ  
Sbjct: 131  DHVFHPECIDEWLSSHTTCPVCRANLLPTESEDAIANANANGVVPVPETLTRDI-ESQND 189

Query: 614  VLIQVVDGEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSL 793
              +Q    +QN+++ P +  P V++     NR      TR   +    RFPRSHSTGHSL
Sbjct: 190  A-VQAAPEQQNAEADPVLPEPEVVSLDKTLNR----NRTRGSRSNRPRRFPRSHSTGHSL 244

Query: 794  VQPGGNYERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXXXXXXXXX 973
            VQPG N +R+TLKLP +VRKQ++N +L R +S +  PR+GS      T            
Sbjct: 245  VQPGENTDRFTLKLPLEVRKQLINRQLQRASSLIVLPREGSSRQGYRTGGEGSSRGKISR 304

Query: 974  XHQLGPFDRAGKSDRWGFSIAPPFFWR 1054
                   DR+ KSDRW FS+  PFF R
Sbjct: 305  R-----LDRSLKSDRWIFSMTAPFFAR 326


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
            gi|223547072|gb|EEF48569.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 436

 Score =  222 bits (566), Expect = 2e-55
 Identities = 145/357 (40%), Positives = 184/357 (51%), Gaps = 19/357 (5%)
 Frame = +2

Query: 41   PYATAQGSHSSLPT-----PTQSFKPSMTVTIVVLSVACVIXXXXXXXXXXXXXXXXXXX 205
            P+ +AQ   ++ PT     P  SF PS+ + +V++  A  +                   
Sbjct: 28   PFTSAQQESTTPPTLEPLAPAPSFNPSLAILMVIIVSAFFVMGFFSVYIRQCADRRYRRG 87

Query: 206  XXXXXXXXXXXXXXXXXXRLTRTRTWPAPRGLDPTLIETFPTFLYSVVKGLKIGKEVLEC 385
                              R +R R     +GLDP +I TFPTFLYS VKG KIGKE LEC
Sbjct: 88   SNFNPSASPIGGGG----RWSRRRQ----QGLDPEVINTFPTFLYSTVKGHKIGKESLEC 139

Query: 386  AVCLNEFEEDETLRLLPQCNHVFHPECIDAWLTSHTTCPVCRANLEVHSPSEATQVPGLL 565
            AVCLNEFE+D+TLRL P+C+HVFHP+CIDAWL S+TTCPVCRANL       A       
Sbjct: 140  AVCLNEFEDDQTLRLTPKCSHVFHPDCIDAWLASNTTCPVCRANLVPKPGDLAFDSVSFF 199

Query: 566  AEENLATPEV----------SESQTQVLIQVVDGEQNSDSKPDVIN---PTVLN-SFPIQ 703
               N     V           E+Q  VLI+V D   +  S+P+V N   P V++ S   Q
Sbjct: 200  EPNNTNNTSVEPDQLQERPNDETQNGVLIRVSD--DHDRSRPEVQNQQSPDVISLSTASQ 257

Query: 704  NRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPGGNYERYTLKLPDDVRKQILNGKLTRT 883
            NRP RS ST    A +   FPRSHSTGHSLVQPG N +R+TL+LP+DVR Q+LN  L R 
Sbjct: 258  NRPPRSWSTGWRFARL---FPRSHSTGHSLVQPGENLDRFTLRLPEDVRSQLLNTHLNRA 314

Query: 884  TSCVTFPRQGSVSGWSATXXXXXXXXXXXXXHQLGPFDRAGKSDRWGFSIAPPFFWR 1054
             SCV FPR  S      +             ++   FD   + +  G ++ PPF  R
Sbjct: 315  KSCVAFPRASSSKKGYRSRSGGGWRGRNFYFYE--RFDEEVRPEHSGLTLTPPFISR 369