BLASTX nr result
ID: Coptis25_contig00016646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016646
(1380 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 3... 418 e-114
emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera] 418 e-114
ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|2... 417 e-114
ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, ... 413 e-113
ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|2... 412 e-113
>ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 32 [Vitis vinifera]
gi|296083258|emb|CBI22894.3| unnamed protein product
[Vitis vinifera]
Length = 297
Score = 418 bits (1075), Expect = e-114
Identities = 217/301 (72%), Positives = 237/301 (78%), Gaps = 3/301 (0%)
Frame = -1
Query: 1305 MAEEKYNLKNPAVKRILQEVKEMQSNPCDDFMSLPLEENIFEWQFAIAGPRDSEFEGGIY 1126
MAE+KYNLKNP VKRILQEVKEMQSNP DDFMSLPLEENIFEWQFAI GP D+EFEGGIY
Sbjct: 1 MAEDKYNLKNPGVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPSDTEFEGGIY 60
Query: 1125 HGRIQLPAEYPFKPPSFMLLTRNGRFETQTKICLSISNYHPEHWQPSWSVRTALVALIAF 946
HGRIQLPAEYPF+PPSFMLLT NGRFETQTKICLSISN+HPEHWQPSWSVRTALVALIAF
Sbjct: 61 HGRIQLPAEYPFQPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 945 MPTNPNGALGSLDYKKEERRGLAIKSRGVAPKFGTSERQRLIDEIHQYMLSKVPPVPQLA 766
MPT+PNGALGSLDYKKEER LAIKSR APKFGT ERQ+LIDEIH+YMLSK PPVPQL
Sbjct: 121 MPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSKSPPVPQLN 180
Query: 765 AQESSDEHPTNAEGEAPVAPLDGDNITAPDEQPNPEAEDRINVRE---VHANAGPLSVSF 595
+ ++ +E TN EGE P +G I A DE +P DRI E V NA P
Sbjct: 181 SSQAPEEPSTNREGEGQTNPPNGSAIAAADELSDPRVADRIVEEEPPQVPLNANP----- 235
Query: 594 RTVTVSRHVPAAEHGEQLQMPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMD 415
VSR AA LQ P RV +Q+DDRL TWAA+GLT+AI+VLLLKKF++SSG
Sbjct: 236 --SPVSRQASAA---RLLQKPMPRVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHG 290
Query: 414 A 412
A
Sbjct: 291 A 291
>emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera]
Length = 297
Score = 418 bits (1074), Expect = e-114
Identities = 215/301 (71%), Positives = 236/301 (78%), Gaps = 3/301 (0%)
Frame = -1
Query: 1305 MAEEKYNLKNPAVKRILQEVKEMQSNPCDDFMSLPLEENIFEWQFAIAGPRDSEFEGGIY 1126
MAE+KYNLKNP VKRILQEVKEMQSNP DDFMSLPLEENIFEWQFAI GP D+EFEGGIY
Sbjct: 1 MAEDKYNLKNPGVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPSDTEFEGGIY 60
Query: 1125 HGRIQLPAEYPFKPPSFMLLTRNGRFETQTKICLSISNYHPEHWQPSWSVRTALVALIAF 946
HGRIQLPAEYPF+PPSFMLLT NGRFETQTKICLSISN+HPEHWQPSWSVRTALVALIAF
Sbjct: 61 HGRIQLPAEYPFQPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 945 MPTNPNGALGSLDYKKEERRGLAIKSRGVAPKFGTSERQRLIDEIHQYMLSKVPPVPQLA 766
MPT+PNGALGSLDYKKEER LAIKSR APKFGT ERQ+LIDEIH+YMLSK PPVPQL
Sbjct: 121 MPTSPNGALGSLDYKKEERHALAIKSREAAPKFGTPERQKLIDEIHEYMLSKSPPVPQLN 180
Query: 765 AQESSDEHPTNAEGEAPVAPLDGDNITAPDEQPNPEAEDRINVRE---VHANAGPLSVSF 595
+ ++ +E TN EGE P +G I A DE +P DRI E V NA P VS
Sbjct: 181 SSQAPEEPSTNREGEGQTNPPNGSAIAAADELSDPRVADRIVEEEPPQVPLNANPSPVSR 240
Query: 594 RTVTVSRHVPAAEHGEQLQMPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMD 415
+ V LQ P RV +Q+DDRL TWAA+GLT+AI+VLLLKKF++SSG
Sbjct: 241 QASAV----------RLLQKPVPRVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHG 290
Query: 414 A 412
A
Sbjct: 291 A 291
>ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|222852155|gb|EEE89702.1|
predicted protein [Populus trichocarpa]
Length = 310
Score = 417 bits (1072), Expect = e-114
Identities = 216/312 (69%), Positives = 244/312 (78%), Gaps = 9/312 (2%)
Frame = -1
Query: 1305 MAEEKYNLKNPAVKRILQEVKEMQSNPCDDFMSLPLEENIFEWQFAIAGPRDSEFEGGIY 1126
MAE+KYNLKNPAVKRILQEVKEMQSNP DDFMSLPLEENIFEWQFAI GP ++EFEGGIY
Sbjct: 1 MAEDKYNLKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGETEFEGGIY 60
Query: 1125 HGRIQLPAEYPFKPPSFMLLTRNGRFETQTKICLSISNYHPEHWQPSWSVRTALVALIAF 946
HGRIQLPAEYPFKPPSFMLLT NGRFETQTKICLSISN+HPEHWQPSWSVRTALVALIAF
Sbjct: 61 HGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 945 MPTNPNGALGSLDYKKEERRGLAIKSRGVAPKFGTSERQRLIDEIHQYMLSKVPPVPQLA 766
MPT+PNGALGSLDYKKEERR LA+KSR AP+FGT ERQ+LIDEIHQYMLSK P VPQ
Sbjct: 121 MPTSPNGALGSLDYKKEERRVLAVKSREAAPRFGTPERQKLIDEIHQYMLSKAPSVPQQN 180
Query: 765 AQESSDEHPTNAEGEAPVAPLDGDNITAPDEQPNP------EAEDRI--NVREVHANAGP 610
+ S+EHP N+ E + D + +TA ++ PNP E +R+ V E H A P
Sbjct: 181 PAQGSEEHPNNSVCETQESSPDAEAVTAAEDLPNPAVGEIQEVGERVFEQVHEAHITANP 240
Query: 609 LSVSFRTVTVSRHVPAAEHGEQLQMPEV-RVSKQSDDRLFTWAAIGLTVAILVLLLKKFV 433
S + SR VPA +QL +V RV K +DDRLFTWAA+GL +AI+VLLLKKF+
Sbjct: 241 ---SPAGTSASREVPAKCSSDQLLQRQVTRVQKPADDRLFTWAAVGLAIAIVVLLLKKFM 297
Query: 432 RSSGMDAGSLGG 397
+SSG A + G
Sbjct: 298 KSSGYGAFFMDG 309
>ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, putative [Ricinus
communis] gi|223541527|gb|EEF43076.1| non-canonical
ubiquitin conjugating enzyme, putative [Ricinus communis]
Length = 309
Score = 413 bits (1062), Expect = e-113
Identities = 215/314 (68%), Positives = 241/314 (76%), Gaps = 14/314 (4%)
Frame = -1
Query: 1305 MAEEKYNLKNPAVKRILQEVKEMQSNPCDDFMSLPLEENIFEWQFAIAGPRDSEFEGGIY 1126
MAE+KYNLKNPAVKRILQEVKEMQSNP DDFMS+PLEENIFEWQFAI GP D+EFEGGIY
Sbjct: 1 MAEDKYNLKNPAVKRILQEVKEMQSNPSDDFMSMPLEENIFEWQFAIRGPCDTEFEGGIY 60
Query: 1125 HGRIQLPAEYPFKPPSFMLLTRNGRFETQTKICLSISNYHPEHWQPSWSVRTALVALIAF 946
HGRIQLP+EYPFKPPSF+LLT NGRFETQTKICLSISN+HPEHWQPSWSVRTALVALIAF
Sbjct: 61 HGRIQLPSEYPFKPPSFLLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 120
Query: 945 MPTNPNGALGSLDYKKEERRGLAIKSRGVAPKFGTSERQRLIDEIHQYMLSKVPPVPQLA 766
MPTNPNGALGSLDYKKEERR LAIKSR AP+FGT ERQ+LIDEIHQYMLSK PPVPQL+
Sbjct: 121 MPTNPNGALGSLDYKKEERRALAIKSREAAPRFGTPERQKLIDEIHQYMLSKAPPVPQLS 180
Query: 765 AQESSDEHPTNAEGEAPVAPLDGDNITAPDEQPNPEAEDRI--------NVREVHANAGP 610
+ S+EH T E EA + + A PN +++ V E N P
Sbjct: 181 PSQDSEEHHTGKEDEAHAILQEQGAVAA--NLPNLAVSEQLAVGDRIVEEVPEAPVNVNP 238
Query: 609 LSVSFRTVTVSRHVPAAEHGEQ-LQMPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFV 433
+ RT S +PA +Q L PE RV + +DDRLFTWAA+GLT+AI+VLLLKKF+
Sbjct: 239 GATGVRT---STEIPARASSDQLLHRPETRVQRPADDRLFTWAAVGLTIAIVVLLLKKFL 295
Query: 432 RSSG-----MDAGS 406
+SSG MD GS
Sbjct: 296 KSSGHGAVFMDGGS 309
>ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|222863981|gb|EEF01112.1|
predicted protein [Populus trichocarpa]
Length = 308
Score = 412 bits (1060), Expect = e-113
Identities = 213/310 (68%), Positives = 245/310 (79%), Gaps = 7/310 (2%)
Frame = -1
Query: 1305 MAEEKYNLKNPAVKRILQEVKEMQSNPCDDFMSLPLEENIFEWQFAIAGPRDSEFEGGIY 1126
MA +KYNLKNP+VKRILQEV+EMQS+P DDFMSLPLEENIFEWQFAI GP ++EFEGGIY
Sbjct: 1 MAVDKYNLKNPSVKRILQEVREMQSSPSDDFMSLPLEENIFEWQFAIRGPGETEFEGGIY 60
Query: 1125 HGRIQLPAEYPFKPPSFMLLTRNGRFETQTKICLSISNYHPEHWQPSWSVRTALVALIAF 946
HGRIQLPAEYPFKPPSFMLLT NGRFETQTKICLSISN+HPEHWQPSWSVRTAL+ALIAF
Sbjct: 61 HGRIQLPAEYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALLALIAF 120
Query: 945 MPTNPNGALGSLDYKKEERRGLAIKSRGVAPKFGTSERQRLIDEIHQYMLSKVPPVPQLA 766
MPT+PNGALGSLDYKKEERR LA+KSR AP+FGT ERQ+LIDEIHQYML K P VPQ
Sbjct: 121 MPTSPNGALGSLDYKKEERRVLAVKSREAAPRFGTPERQKLIDEIHQYMLGKAPSVPQQN 180
Query: 765 AQESSDEHPTNAEGEAPVAPLDGDNITAPDEQPNP------EAEDRINVREVHANAGPLS 604
+ + S+EHP N EGEA D + A +E PNP E +R+ + EVH ++
Sbjct: 181 SVQGSEEHPGNNEGEAQAQ--DAGVVAAAEELPNPAVGEIQEVGERV-IEEVHEAPVNVN 237
Query: 603 VSFRTVTVSRHVPAAEHGEQ-LQMPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRS 427
S +VSR +PA +Q LQ P RV K +DDRLFTWAA+GLT+AI+VLLLKKF++S
Sbjct: 238 PSPTGTSVSREIPARGPTDQLLQRPVTRVQKPADDRLFTWAAVGLTIAIVVLLLKKFMKS 297
Query: 426 SGMDAGSLGG 397
SG A + G
Sbjct: 298 SGYGALFMDG 307