BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016640
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    67   1e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   1e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    67   1e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   5e-08
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   7e-08

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 28/88 (31%), Positives = 53/88 (60%)
 Frame = -3

Query: 574 MTIEAWNCRGIGSSTTIRSLKDLILVSNPDIICLAETKASEKKL*LVGKRIKYGGSCFVP 395
           M+  AWNCRG+G++ T++ L+ LI  +   ++ L ET+ S +K+  + +++ + G   V 
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 394 AVGKKGGLTVFWKEGIQIDIMRATSNHI 311
           + GK GGL ++W E + +D+      +I
Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYI 723


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = -3

Query: 568 IEAWNCRGIGSSTTIRSLKDLILVSNPDIICLAETKASEKKL*LVGKRIKYGGSCFVPAV 389
           I +WNCRG+GS + + +L+ L+   NP I+ L+ETK    ++  V K++K+     V   
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 388 G----KKGGLTVFWKEGIQIDIMRATSNHI 311
           G    ++GGL + W+  I++ +M  +SNHI
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHI 93


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/101 (31%), Positives = 58/101 (57%)
 Frame = -3

Query: 574 MTIEAWNCRGIGSSTTIRSLKDLILVSNPDIICLAETKASEKKL*LVGKRIKYGGSCFVP 395
           M I +WNC+G+G++ T+R L+++  +  P++I L ETK     L  V   + +     V 
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 394 AVGKKGGLTVFWKEGIQIDIMRATSNHIIGLMVRQQLELFV 272
            +GK GGL + WK+ +QI ++++    I  L++ Q  E ++
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYL 101


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 30/90 (33%), Positives = 51/90 (56%)
 Frame = -3

Query: 574 MTIEAWNCRGIGSSTTIRSLKDLILVSNPDIICLAETKASEKKL*LVGKRIKYGGSCFVP 395
           M I  WNCRG+G+  T+R L+       PDI+ L+ET  ++ +   +  R+ +  +  V 
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 394 AVGKKGGLTVFWKEGIQIDIMRATSNHIIG 305
           + G+ GGL VFW+E +   ++  + +HI G
Sbjct: 61  SRGRAGGLCVFWREELSFSLVSFSQHHICG 90


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -3

Query: 574 MTIEAWNCRGIGSSTTIRSLKDLILVSNPDIICLAETKASEKKL*LVGKRIKYGGSCFVP 395
           M I  WNC+G+G+  T+R L+ L+  + PD + ++ETK ++  +    + + + G+  V 
Sbjct: 1   MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 394 AVGKKGGLTVFWK-EGIQIDIMRATSNHIIG 305
            VG+ GGL +FWK E I   ++  + NHI G
Sbjct: 61  CVGRAGGLCMFWKEETISFRMVSFSQNHICG 91