BLASTX nr result

ID: Coptis25_contig00016638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016638
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543222.1| PREDICTED: uncharacterized protein LOC100809...   201   2e-49
gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]             201   3e-49
ref|NP_564623.2| calcium-binding EF-hand domain-containing prote...   201   3e-49
gb|AAK32813.1|AF361800_1 At1g53210/F12M16_12 [Arabidopsis thalia...   201   3e-49
emb|CAN78275.1| hypothetical protein VITISV_037788 [Vitis vinifera]   199   8e-49

>ref|XP_003543222.1| PREDICTED: uncharacterized protein LOC100809896 [Glycine max]
          Length = 579

 Score =  201 bits (512), Expect = 2e-49
 Identities = 108/282 (38%), Positives = 164/282 (58%), Gaps = 3/282 (1%)
 Frame = +3

Query: 3    IIRDMFKKFDQNNDKYVTAAELKGLMLGIQFQEEGVNTENFAEMVFNKINFSGDGHVDEE 182
            +IR +F+  D+N D  +T  EL+ L++GIQF+E  ++ ++  + + +  + SG+  VD E
Sbjct: 299  VIRKLFQTIDENQDDNLTHNELRALVIGIQFEEIDLDHDDAVKRIMDDFDTSGNERVDRE 358

Query: 183  EFVRGIXXXXXXXXXXXXXXIRRQWHLQ---NDSSEEAGEEQPLLMNQETEKTDSVKAVD 353
            EFV G+                   H     +D   E   E  LL +   +  +  + ++
Sbjct: 359  EFVNGVSRWLQRAQRARVASGDAGPHTMKFLSDFHTETKREHDLL-DVGGQVNEEAEGIE 417

Query: 354  NLFWSCIEXXXXXXXXXXXXXXXSRPLIVAVVGFSSAANVPSIFISFTLVPLAVNYRTAR 533
            N  W  I+               + PL+ AV  FS A ++P+ FISF  +PLA N   A 
Sbjct: 418  NAKWISIKAVLLLLLGTIIAAAFADPLVDAVDNFSEATSIPAFFISFIFLPLATNSSEAV 477

Query: 534  TAITLIQERIKQSASLTLSEIYTAVFMNHIIGVSIFLGIIYARGLTWNFSAEVIVVLIVC 713
            +AI       +Q+ASLT SE+Y AV MN+++ +S+FL ++YARGLTW+FS+EV+V+L+VC
Sbjct: 478  SAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYARGLTWDFSSEVLVILVVC 537

Query: 714  IVMGLFTSFCNTFPLWSCFIAYLLYPFSLMLVYVLTYMYGWA 839
            IV+G+F SF   FPLW+  +A LLYPFSL LVYVL Y++GW+
Sbjct: 538  IVVGVFASFRTVFPLWTAILAILLYPFSLALVYVLDYVFGWS 579


>gb|AAF69532.1|AC008007_7 F12M16.12 [Arabidopsis thaliana]
          Length = 574

 Score =  201 bits (511), Expect = 3e-49
 Identities = 115/283 (40%), Positives = 159/283 (56%), Gaps = 4/283 (1%)
 Frame = +3

Query: 3    IIRDMFKKFDQNNDKYVTAAELKGLMLGIQFQEEGVNTENFAEMVFNKINFSGDGHVDEE 182
            +IR +F   D NND +++AAELK L++GI F++   + ++    V    + + D  VD+E
Sbjct: 292  VIRKLFLTIDANNDGHLSAAELKALIIGISFEDIDFDKDDAVGKVLQDFDKTLDEQVDQE 351

Query: 183  EFVRGIXXXXXXXXXXXXXXI----RRQWHLQNDSSEEAGEEQPLLMNQETEKTDSVKAV 350
            EFVRGI                   R    L N   +   E   L  N+  E  +    V
Sbjct: 352  EFVRGIKQWLIQAMGGAPSGPEAGPRTMKFLDNFHVQTKREHALLGDNENGENDEEGGEV 411

Query: 351  DNLFWSCIEXXXXXXXXXXXXXXXSRPLIVAVVGFSSAANVPSIFISFTLVPLAVNYRTA 530
             +  W  I+               + PL+  V  FS+A  +PS FISF  +PLA N   A
Sbjct: 412  ADPKWITIKAALLLLLGAAIAAAFADPLVDTVNNFSAATGIPSFFISFIALPLATNSSEA 471

Query: 531  RTAITLIQERIKQSASLTLSEIYTAVFMNHIIGVSIFLGIIYARGLTWNFSAEVIVVLIV 710
             +AI     +  ++ASLT SE+   V MN+I+ +S+FL I+Y RGLTWNFS+EV+V+LIV
Sbjct: 472  VSAIIFASRKKIRTASLTFSELCGGVTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILIV 531

Query: 711  CIVMGLFTSFCNTFPLWSCFIAYLLYPFSLMLVYVLTYMYGWA 839
            C+VMG F SF  T+PLW+CFIAYLLYPFSL LVY+L Y +GW+
Sbjct: 532  CLVMGGFASFRTTYPLWTCFIAYLLYPFSLGLVYILDYWFGWS 574


>ref|NP_564623.2| calcium-binding EF-hand domain-containing protein [Arabidopsis
            thaliana] gi|20466169|gb|AAM20402.1| unknown protein
            [Arabidopsis thaliana] gi|332194787|gb|AEE32908.1|
            calcium-binding EF-hand domain-containing protein
            [Arabidopsis thaliana]
          Length = 585

 Score =  201 bits (511), Expect = 3e-49
 Identities = 115/283 (40%), Positives = 159/283 (56%), Gaps = 4/283 (1%)
 Frame = +3

Query: 3    IIRDMFKKFDQNNDKYVTAAELKGLMLGIQFQEEGVNTENFAEMVFNKINFSGDGHVDEE 182
            +IR +F   D NND +++AAELK L++GI F++   + ++    V    + + D  VD+E
Sbjct: 303  VIRKLFLTIDANNDGHLSAAELKALIIGISFEDIDFDKDDAVGKVLQDFDKTLDEQVDQE 362

Query: 183  EFVRGIXXXXXXXXXXXXXXI----RRQWHLQNDSSEEAGEEQPLLMNQETEKTDSVKAV 350
            EFVRGI                   R    L N   +   E   L  N+  E  +    V
Sbjct: 363  EFVRGIKQWLIQAMGGAPSGPEAGPRTMKFLDNFHVQTKREHALLGDNENGENDEEGGEV 422

Query: 351  DNLFWSCIEXXXXXXXXXXXXXXXSRPLIVAVVGFSSAANVPSIFISFTLVPLAVNYRTA 530
             +  W  I+               + PL+  V  FS+A  +PS FISF  +PLA N   A
Sbjct: 423  ADPKWITIKAALLLLLGAAIAAAFADPLVDTVNNFSAATGIPSFFISFIALPLATNSSEA 482

Query: 531  RTAITLIQERIKQSASLTLSEIYTAVFMNHIIGVSIFLGIIYARGLTWNFSAEVIVVLIV 710
             +AI     +  ++ASLT SE+   V MN+I+ +S+FL I+Y RGLTWNFS+EV+V+LIV
Sbjct: 483  VSAIIFASRKKIRTASLTFSELCGGVTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILIV 542

Query: 711  CIVMGLFTSFCNTFPLWSCFIAYLLYPFSLMLVYVLTYMYGWA 839
            C+VMG F SF  T+PLW+CFIAYLLYPFSL LVY+L Y +GW+
Sbjct: 543  CLVMGGFASFRTTYPLWTCFIAYLLYPFSLGLVYILDYWFGWS 585


>gb|AAK32813.1|AF361800_1 At1g53210/F12M16_12 [Arabidopsis thaliana] gi|22137208|gb|AAM91449.1|
            At1g53210/F12M16_12 [Arabidopsis thaliana]
          Length = 493

 Score =  201 bits (511), Expect = 3e-49
 Identities = 115/283 (40%), Positives = 159/283 (56%), Gaps = 4/283 (1%)
 Frame = +3

Query: 3    IIRDMFKKFDQNNDKYVTAAELKGLMLGIQFQEEGVNTENFAEMVFNKINFSGDGHVDEE 182
            +IR +F   D NND +++AAELK L++GI F++   + ++    V    + + D  VD+E
Sbjct: 211  VIRKLFLTIDANNDGHLSAAELKALIIGISFEDIDFDKDDAVGKVLQDFDKTLDEQVDQE 270

Query: 183  EFVRGIXXXXXXXXXXXXXXI----RRQWHLQNDSSEEAGEEQPLLMNQETEKTDSVKAV 350
            EFVRGI                   R    L N   +   E   L  N+  E  +    V
Sbjct: 271  EFVRGIKQWLIQAMGGAPSGPEAGPRTMKFLDNFHVQTKREHALLGDNENGENDEEGGEV 330

Query: 351  DNLFWSCIEXXXXXXXXXXXXXXXSRPLIVAVVGFSSAANVPSIFISFTLVPLAVNYRTA 530
             +  W  I+               + PL+  V  FS+A  +PS FISF  +PLA N   A
Sbjct: 331  ADPKWITIKAALLLLLGAAIAAAFADPLVDTVNNFSAATGIPSFFISFIALPLATNSSEA 390

Query: 531  RTAITLIQERIKQSASLTLSEIYTAVFMNHIIGVSIFLGIIYARGLTWNFSAEVIVVLIV 710
             +AI     +  ++ASLT SE+   V MN+I+ +S+FL I+Y RGLTWNFS+EV+V+LIV
Sbjct: 391  VSAIIFASRKKIRTASLTFSELCGGVTMNNILCLSVFLAIVYVRGLTWNFSSEVLVILIV 450

Query: 711  CIVMGLFTSFCNTFPLWSCFIAYLLYPFSLMLVYVLTYMYGWA 839
            C+VMG F SF  T+PLW+CFIAYLLYPFSL LVY+L Y +GW+
Sbjct: 451  CLVMGGFASFRTTYPLWTCFIAYLLYPFSLGLVYILDYWFGWS 493


>emb|CAN78275.1| hypothetical protein VITISV_037788 [Vitis vinifera]
          Length = 529

 Score =  199 bits (507), Expect = 8e-49
 Identities = 106/278 (38%), Positives = 168/278 (60%)
 Frame = +3

Query: 6    IRDMFKKFDQNNDKYVTAAELKGLMLGIQFQEEGVNTENFAEMVFNKINFSGDGHVDEEE 185
            IR++F + DQN D  ++ AEL+  +LGI+ +E G+  E+F E V    + SG+  +DE E
Sbjct: 256  IREVFHEIDQNKDXSISXAELRAXLLGIKLEEAGLRNEDFVEKVMEDFDASGNAQIDETE 315

Query: 186  FVRGIXXXXXXXXXXXXXXIRRQWHLQNDSSEEAGEEQPLLMNQETEKTDSVKAVDNLFW 365
            F RGI                 +  L + S++   E+Q LL  +  +++ + +   N ++
Sbjct: 316  FHRGISKWLXEANHPDNNQYDERPKLFSRSAQSE-EQQSLLAKKAKQQSQTAQ---NSWF 371

Query: 366  SCIEXXXXXXXXXXXXXXXSRPLIVAVVGFSSAANVPSIFISFTLVPLAVNYRTARTAIT 545
            +  +               ++PLI  +  FSSA N+PS  IS+ ++P+A++YR    AI 
Sbjct: 372  NYFKAAFLLIIGTAVMSLLAQPLIQTINEFSSAVNIPSFIISYVIIPVAMSYRETLGAIK 431

Query: 546  LIQERIKQSASLTLSEIYTAVFMNHIIGVSIFLGIIYARGLTWNFSAEVIVVLIVCIVMG 725
              + + KQ+ SLT SEIY AVFMN+++G+++FL ++Y R L+W+ SAE++VVLI+C +MG
Sbjct: 432  SARXKTKQAISLTFSEIYNAVFMNNMMGLAMFLLLVYIRDLSWDVSAEILVVLIICTLMG 491

Query: 726  LFTSFCNTFPLWSCFIAYLLYPFSLMLVYVLTYMYGWA 839
            L TS    FP+W+  IAYL+YP SL L+YVLT + GW+
Sbjct: 492  LLTSCSTKFPIWTAIIAYLMYPISLGLLYVLTEVLGWS 529


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