BLASTX nr result

ID: Coptis25_contig00016637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016637
         (1276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   245   2e-62
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   242   1e-61
ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   233   8e-59
gb|ABK94888.1| unknown [Populus trichocarpa]                          232   2e-58
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   230   5e-58

>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
            gi|296089330|emb|CBI39102.3| unnamed protein product
            [Vitis vinifera]
          Length = 200

 Score =  245 bits (625), Expect = 2e-62
 Identities = 128/198 (64%), Positives = 151/198 (76%), Gaps = 8/198 (4%)
 Frame = -1

Query: 1156 MPKVYPNAVAPQALKPA-----SDGQVQVLTVWKKSLLFNCKGFTVFDAKGNLVFRVDNY 992
            M KVYPNA A  +           G   VLTVWKKSLLFNC GFTVFD KGNLVFRVDNY
Sbjct: 1    MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 991  LCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNSRSLA 812
            +  NK EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET  NP F ++K +NLL+S+SLA
Sbjct: 61   VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 811  HVSVGSNNNV---LYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXXXXXFRLVVQ 641
             VS GS++++   +Y+IEGSYSQRCCAVYDE+R+ VAEIKRKE           FRL+VQ
Sbjct: 121  RVSGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIVQ 180

Query: 640  PEMDSTVAMALVILLDQM 587
            PEMD+ VAMALVILLDQM
Sbjct: 181  PEMDTPVAMALVILLDQM 198


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
            gi|147770903|emb|CAN65231.1| hypothetical protein
            VITISV_007600 [Vitis vinifera]
            gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
            vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
            [Vitis vinifera]
          Length = 216

 Score =  242 bits (618), Expect = 1e-61
 Identities = 134/213 (62%), Positives = 149/213 (69%), Gaps = 20/213 (9%)
 Frame = -1

Query: 1156 MPKVYPNAVAPQALKPASDG---------QVQVLTVWKKSLLFNCKGFTVFDAKGNLVFR 1004
            M KVYPNA A       S+G            VLTVWKKSLLFNC GFTVFD KGNLVFR
Sbjct: 1    MTKVYPNATAASC---GSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFR 57

Query: 1003 VDNYLCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNS 824
            VDNY+  +K EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET  NP F V+K  NLLNS
Sbjct: 58   VDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNS 117

Query: 823  RSLAHVSVG-----------SNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 677
            +SLA VS G           S  N +Y+IEGSYSQRCCAVYDE R+ VAEIKRKE     
Sbjct: 118  KSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGV 177

Query: 676  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 578
                  FRLVVQPEMD+ VAMALVILLDQM GS
Sbjct: 178  ALGVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
            predicted protein [Populus trichocarpa]
          Length = 207

 Score =  233 bits (594), Expect = 8e-59
 Identities = 127/207 (61%), Positives = 153/207 (73%), Gaps = 17/207 (8%)
 Frame = -1

Query: 1156 MPKVYPNAVAPQA---------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDAKGN 1016
            M KVYPN VAP           LKPA++        VLTVWKKSLLFNC GFTV+D +GN
Sbjct: 1    MTKVYPN-VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGN 59

Query: 1015 LVFRVDNYLCS--NKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQ 842
            LVFRVDNY+ +  N  EI+LMDA GKPLLTIRRK+L+L DNW+V++GET  NP F VKK 
Sbjct: 60   LVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKH 119

Query: 841  VNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXX 668
            VN+LN++ LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE        
Sbjct: 120  VNILNTKCLAHVSPASGSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAFG 179

Query: 667  XXXFRLVVQPEMDSTVAMALVILLDQM 587
               FRL+V PEM +++AMA+VILLDQM
Sbjct: 180  VDVFRLIVGPEMGTSMAMAMVILLDQM 206


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  232 bits (591), Expect = 2e-58
 Identities = 126/213 (59%), Positives = 159/213 (74%), Gaps = 20/213 (9%)
 Frame = -1

Query: 1156 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 1025
            M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1    MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 1024 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 851
            KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V
Sbjct: 60   KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 850  KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 677
            KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120  KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 676  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 578
                  FRL+V PE+DS++AMA+VI+LDQM GS
Sbjct: 180  AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
            predicted protein [Populus trichocarpa]
          Length = 211

 Score =  230 bits (587), Expect = 5e-58
 Identities = 125/212 (58%), Positives = 158/212 (74%), Gaps = 20/212 (9%)
 Frame = -1

Query: 1156 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 1025
            M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1    MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 1024 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 851
            KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V
Sbjct: 60   KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 850  KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 677
            KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120  KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 676  XXXXXXFRLVVQPEMDSTVAMALVILLDQMCG 581
                  FRL+V PE+DS++AMA+VI+LDQM G
Sbjct: 180  AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211


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