BLASTX nr result

ID: Coptis25_contig00016602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016602
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301714.1| NBS resistance protein [Populus trichocarpa]...   140   8e-32
ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichoca...   140   8e-32
gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indi...   135   3e-30
ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group] g...   135   3e-30
ref|XP_002516740.1| leucine-rich repeat containing protein, puta...   133   2e-29

>ref|XP_002301714.1| NBS resistance protein [Populus trichocarpa]
           gi|222843440|gb|EEE80987.1| NBS resistance protein
           [Populus trichocarpa]
          Length = 171

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/111 (59%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   FGMENDEITPNLRKMGEEIISKCGGVPLAVKALGSLLH-SRNDEFWRCVRDSELWTLQER 177
           FGM   E   +L  +G  I+ KCGGVPLA+KALG+L+   ++++ W CV++SE+W L++ 
Sbjct: 62  FGMRRREEYAHLETIGRAIVKKCGGVPLAIKALGNLMRLKKHEDEWLCVKESEIWDLRQE 121

Query: 178 GENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEKLIHQWMANGFI 330
           G +TILPALRLSY +LPP L+QCFAYCSI+PKDY MEK++LI  WMANGFI
Sbjct: 122 G-STILPALRLSYINLPPHLKQCFAYCSIFPKDYVMEKDRLITLWMANGFI 171


>ref|XP_002301713.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222843439|gb|EEE80986.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1109

 Score =  140 bits (354), Expect = 8e-32
 Identities = 66/111 (59%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   FGMENDEITPNLRKMGEEIISKCGGVPLAVKALGSLLH-SRNDEFWRCVRDSELWTLQER 177
           FGM   E   +L  +G  I+ KCGGVPLA+KALG+L+   ++++ W CV++SE+W L++ 
Sbjct: 346 FGMRRREEYAHLETIGRAIVKKCGGVPLAIKALGNLMRLKKHEDEWLCVKESEIWDLRQE 405

Query: 178 GENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEKLIHQWMANGFI 330
           G +TILPALRLSY +LPP L+QCFAYCSI+PKDY MEK++LI  WMANGFI
Sbjct: 406 G-STILPALRLSYINLPPHLKQCFAYCSIFPKDYVMEKDRLITLWMANGFI 455


>gb|EAY73380.1| hypothetical protein OsI_01261 [Oryza sativa Indica Group]
          Length = 1264

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/112 (54%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   FGMENDEITPNLRKMGEEIISKCGGVPLAVKALGSLLH-SRNDEFWRCVRDSELWTLQER 177
           F   ++E+ P L ++G+EI+ KCGGVPLA KALGS+L   RN+E W  VRDSE+W L + 
Sbjct: 314 FEEADEELYPKLVRIGKEIVPKCGGVPLAAKALGSMLRFKRNEESWIAVRDSEIWQLDK- 372

Query: 178 GENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEKLIHQWMANGFIQ 333
            E TILP+L+LSY+ +PP+L+QCFAYCS++P+++ ++K KLI QW+A GF++
Sbjct: 373 -EETILPSLKLSYDQMPPVLKQCFAYCSVFPRNHEIDKGKLIQQWVALGFVE 423


>ref|NP_001042644.1| Os01g0260500 [Oryza sativa Japonica Group]
           gi|9558523|dbj|BAB03441.1| NBS-LRR disease resistance
           protein -like [Oryza sativa Japonica Group]
           gi|113532175|dbj|BAF04558.1| Os01g0260500 [Oryza sativa
           Japonica Group] gi|125569799|gb|EAZ11314.1| hypothetical
           protein OsJ_01178 [Oryza sativa Japonica Group]
          Length = 1292

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/112 (54%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   FGMENDEITPNLRKMGEEIISKCGGVPLAVKALGSLLH-SRNDEFWRCVRDSELWTLQER 177
           F   ++E+ P L ++G+EI+ KCGGVPLA KALGS+L   RN+E W  VRDSE+W L + 
Sbjct: 342 FEEADEELYPKLVRIGKEIVPKCGGVPLAAKALGSMLRFKRNEESWIAVRDSEIWQLDK- 400

Query: 178 GENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEKLIHQWMANGFIQ 333
            E TILP+L+LSY+ +PP+L+QCFAYCS++P+++ ++K KLI QW+A GF++
Sbjct: 401 -EETILPSLKLSYDQMPPVLKQCFAYCSVFPRNHEIDKGKLIQQWVALGFVE 451


>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223544113|gb|EEF45638.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1104

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
 Frame = +1

Query: 1   FGMENDEITPNLRKMGEEIISKCGGVPLAVKALGSLLH-SRNDEFWRCVRDSELWTLQER 177
           FG+E  E   +L  +G  I++KCGGVPLA+KA+GSL+   R    W  V++SE+W L   
Sbjct: 337 FGLERKEEFLHLETIGRAIVNKCGGVPLAIKAMGSLMRLKRKKSEWLSVKESEMWELSNE 396

Query: 178 GENTILPALRLSYNHLPPILRQCFAYCSIYPKDYTMEKEKLIHQWMANGFI 330
               +LPALRLSYNHL P L+QCFA+CSI+PKD+ ++KEKLI  WMANGFI
Sbjct: 397 RNMNVLPALRLSYNHLAPHLKQCFAFCSIFPKDFHIKKEKLIELWMANGFI 447


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