BLASTX nr result

ID: Coptis25_contig00016599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016599
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata] g...   180   3e-51
ref|NP_191829.1| ABC transporter C family member 14 [Arabidopsis...   178   9e-51
dbj|BAF00814.1| ABC transporter-like protein [Arabidopsis thaliana]   178   9e-51
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   174   5e-42
dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]       172   2e-41

>ref|XP_002878472.1| ATMRP10 [Arabidopsis lyrata subsp. lyrata]
            gi|297324310|gb|EFH54731.1| ATMRP10 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1546

 Score =  180 bits (456), Expect(2) = 3e-51
 Identities = 86/105 (81%), Positives = 93/105 (88%)
 Frame = -3

Query: 317  WFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQTKFWQETIKRLD 138
            W NIWYRGYYLA+SRELTRLDSITKAPVIHHFSES+AGVMTIRSFKKQ  F QE +KR++
Sbjct: 1134 WLNIWYRGYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRSFKKQHMFRQENVKRVN 1193

Query: 137  ANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKP 3
            ANLRM FHNNG+NEW GFR ELIGS+VLC SALFMVLLPS   KP
Sbjct: 1194 ANLRMDFHNNGSNEWLGFRLELIGSWVLCISALFMVLLPSNIIKP 1238



 Score = 47.0 bits (110), Expect(2) = 3e-51
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -1

Query: 463  TSVLGIIIVTCQVTWPTIFLIIPLVWFNI 377
            T++L I IVTCQ  WPT+F IIPL W NI
Sbjct: 1109 TTLLSIFIVTCQYAWPTVFFIIPLGWLNI 1137


>ref|NP_191829.1| ABC transporter C family member 14 [Arabidopsis thaliana]
            gi|75335712|sp|Q9LZJ5.1|AB14C_ARATH RecName: Full=ABC
            transporter C family member 14; Short=ABC transporter
            ABCC.14; Short=AtABCC14; AltName: Full=ATP-energized
            glutathione S-conjugate pump 10; AltName:
            Full=Glutathione S-conjugate-transporting ATPase 10;
            AltName: Full=Multidrug resistance-associated protein 10
            gi|7362750|emb|CAB83120.1| ABC transporter-like protein
            [Arabidopsis thaliana] gi|332646860|gb|AEE80381.1| ABC
            transporter C family member 14 [Arabidopsis thaliana]
          Length = 1539

 Score =  178 bits (452), Expect(2) = 9e-51
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = -3

Query: 317  WFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQTKFWQETIKRLD 138
            W NIWYRGYYLA+SRELTRLDSITKAPVIHHFSES+AGVMTIR+FKKQ  F QE +KR++
Sbjct: 1127 WLNIWYRGYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRAFKKQPMFRQENVKRVN 1186

Query: 137  ANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKP 3
            ANLRM FHNNG+NEW GFR ELIGS+VLC SALFMV+LPS   KP
Sbjct: 1187 ANLRMDFHNNGSNEWLGFRLELIGSWVLCISALFMVMLPSNIIKP 1231



 Score = 47.0 bits (110), Expect(2) = 9e-51
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -1

Query: 463  TSVLGIIIVTCQVTWPTIFLIIPLVWFNI 377
            T++L I IVTCQ  WPT+F IIPL W NI
Sbjct: 1102 TTLLSIFIVTCQYAWPTVFFIIPLGWLNI 1130


>dbj|BAF00814.1| ABC transporter-like protein [Arabidopsis thaliana]
          Length = 940

 Score =  178 bits (452), Expect(2) = 9e-51
 Identities = 84/105 (80%), Positives = 93/105 (88%)
 Frame = -3

Query: 317 WFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQTKFWQETIKRLD 138
           W NIWYRGYYLA+SRELTRLDSITKAPVIHHFSES+AGVMTIR+FKKQ  F QE +KR++
Sbjct: 528 WLNIWYRGYYLASSRELTRLDSITKAPVIHHFSESIAGVMTIRAFKKQPMFRQENVKRVN 587

Query: 137 ANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKP 3
           ANLRM FHNNG+NEW GFR ELIGS+VLC SALFMV+LPS   KP
Sbjct: 588 ANLRMDFHNNGSNEWLGFRLELIGSWVLCISALFMVMLPSNIIKP 632



 Score = 47.0 bits (110), Expect(2) = 9e-51
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = -1

Query: 463 TSVLGIIIVTCQVTWPTIFLIIPLVWFNI 377
           T++L I IVTCQ  WPT+F IIPL W NI
Sbjct: 503 TTLLSIFIVTCQYAWPTVFFIIPLGWLNI 531


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1508

 Score =  174 bits (442), Expect = 5e-42
 Identities = 92/170 (54%), Positives = 113/170 (66%)
 Frame = -3

Query: 512  NIDLLLPLFINMTIAMYISARHHNRHMSSYLAYDFPHNSTCLVQHLXXXXXXXXXXXXXX 333
            N+D+ LP  + +TIAMYIS       +     Y +P  +  LV  L              
Sbjct: 1054 NVDIFLPFMLALTIAMYISVLGI---IIIICQYTWP--TVFLVIPLG------------- 1095

Query: 332  XXXXXWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQTKFWQET 153
                 W N W+RGY+LATSRELTRLDSITKAPVIHHFSES++GVMTIRSF+KQ  F QE 
Sbjct: 1096 -----WLNFWFRGYFLATSRELTRLDSITKAPVIHHFSESISGVMTIRSFRKQDSFCQEN 1150

Query: 152  IKRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKP 3
            + R++ANLRM FHNNG+NEW G R E+IGSF+LC SA+F++LLPS   KP
Sbjct: 1151 VNRVNANLRMDFHNNGSNEWLGLRLEMIGSFILCASAMFLILLPSSIVKP 1200


>dbj|BAE98764.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1516

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/170 (51%), Positives = 111/170 (65%)
 Frame = -3

Query: 512  NIDLLLPLFINMTIAMYISARHHNRHMSSYLAYDFPHNSTCLVQHLXXXXXXXXXXXXXX 333
            N+D+L+P  + + ++MY +       +S ++        TC                   
Sbjct: 1062 NVDILIPFMLGLVVSMYTTL------LSIFIV-------TC----------QYAWPTAFF 1098

Query: 332  XXXXXWFNIWYRGYYLATSRELTRLDSITKAPVIHHFSESVAGVMTIRSFKKQTKFWQET 153
                 W NIWYR YYLA+SRELTR+DSITKAP+IHHFSES+AGVMTIRSF+KQ  F QE 
Sbjct: 1099 VIPLGWLNIWYRNYYLASSRELTRMDSITKAPIIHHFSESIAGVMTIRSFRKQELFRQEN 1158

Query: 152  IKRLDANLRMTFHNNGANEWFGFREELIGSFVLCFSALFMVLLPSYATKP 3
            +KR++ NLRM FHNNG+NEW GFR EL+GS+VLC SALFMVLLPS   +P
Sbjct: 1159 VKRVNDNLRMDFHNNGSNEWLGFRLELVGSWVLCISALFMVLLPSNVIRP 1208


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