BLASTX nr result

ID: Coptis25_contig00016594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016594
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244...   204   2e-50
ref|XP_002526984.1| conserved hypothetical protein [Ricinus comm...   167   3e-39
ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|2...   165   2e-38
ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago ...   120   5e-25

>ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244058 [Vitis vinifera]
          Length = 317

 Score =  204 bits (520), Expect = 2e-50
 Identities = 129/339 (38%), Positives = 190/339 (56%), Gaps = 9/339 (2%)
 Frame = -1

Query: 1077 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 898
            MEIP+++R+S F+       +PS++SR F +S I +     S W WGALI+AL+ATFTS 
Sbjct: 1    MEIPIINRMSNFD-------DPSVLSRLFPISQISQPF---SLWKWGALILALLATFTSI 50

Query: 897  ISRLKLVVYRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRY 718
            I+R K+++ R ++ +S+  QPL  +                                S  
Sbjct: 51   INRTKILIIRLRKRSSLAAQPLHSE----PDDGGFSDSEDDTCSSISSDDDDDAEPMSLI 106

Query: 717  DEDFTVAGNYEETQGHNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKSWDGLGLGLNFEKA 538
            ++D  V   Y E +  + K KL R  S   D    S+  NGKS+VK WDGL L    + +
Sbjct: 107  EDDKNVRVGYCEDEPQSHKTKLRRCRSIG-DRLFLSELTNGKSIVKLWDGLSL----DNS 161

Query: 537  SESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAAGLETSRNVALQVFDTRVGRQ 358
              SL+S++DLNK+   SSF  G  + P++S+ SPAV+V+     + N AL+V+DTRVGRQ
Sbjct: 162  CGSLVSIYDLNKDLNKSSFFGGTHRFPSVSVTSPAVVVSTMTGNAMNTALRVWDTRVGRQ 221

Query: 357  IPQIFAEWQPRR---------KFEKLYIQNDVSVNNRAVVVRDIRKVDLLLENLTESDVN 205
            IP IFAEW+P+            EK+Y+++DV+     + V D+R     L+N+TE D  
Sbjct: 222  IPAIFAEWRPQMGKRVSISTGGIEKVYVRDDVT---GELTVGDMRNASSPLQNVTECDGG 278

Query: 204  TWWDSDAVIVDGNQEVCYSGNGCGSVVTRCRNAVFSYLF 88
            TWWD+DAV+V  +    ++  GC S+V+RC +AV SYLF
Sbjct: 279  TWWDADAVMVYKDYVDQWAVKGCESIVSRCCDAVKSYLF 317


>ref|XP_002526984.1| conserved hypothetical protein [Ricinus communis]
            gi|223533619|gb|EEF35356.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  167 bits (424), Expect = 3e-39
 Identities = 129/344 (37%), Positives = 180/344 (52%), Gaps = 28/344 (8%)
 Frame = -1

Query: 1077 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 898
            MEIPV++RI  FEA    LQNPS +S+   LS +E+  +   FW WGALI+AL+A+F++ 
Sbjct: 1    MEIPVINRIGDFEAS---LQNPSFLSQAITLSGVEKIHQAYGFWKWGALILALVASFSTI 57

Query: 897  ISRLKLVVYRFQRGNSVITQP---LLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 727
            I+R+K ++ R Q      + P     QQ                                
Sbjct: 58   INRIKNLIIRIQNHYLTPSPPPPLTTQQHYDSDTESETSSSSSSDDEQDIEVEDDEEDED 117

Query: 726  SRY-------DEDFTV---AGNYEETQGHNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKS 577
             R        D+ ++V   +G+Y + Q  N   +  RRNS   D FS  +F NGKSVVK 
Sbjct: 118  ERCSWRSNDDDDYYSVVKGSGHYIDDQWQNRNLR-RRRNSSLQDLFS--EFRNGKSVVKL 174

Query: 576  WD--GLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPS--PAVIVAAGLE 409
            WD  G G GLN +  S + +SL D+NK     S       IPA+S  S  PAVIV++   
Sbjct: 175  WDNLGFGFGLNLDNNSRNCVSLHDINKELSLFSILGERSDIPAVSTSSSSPAVIVSSEAN 234

Query: 408  TSRNVALQVFDTRVGRQIPQIFAEWQPRR-KFE----------KLYIQNDVSVNNRAVVV 262
             + N+ L+V+DTRVG +IP+I AEW+PR  KF           K+Y+++DV+     + V
Sbjct: 235  VAGNL-LKVWDTRVGCRIPEILAEWRPRLGKFVGISSGGGGVGKVYVRDDVTGR---LTV 290

Query: 261  RDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQEVCYSGNGCGS 130
             D+RKV   L N TE+DV+TWWD+D V V G ++     NG GS
Sbjct: 291  GDMRKVKSPLVNATETDVDTWWDADGVSV-GEED-----NGVGS 328


>ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|222863897|gb|EEF01028.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  165 bits (418), Expect = 2e-38
 Identities = 115/334 (34%), Positives = 166/334 (49%), Gaps = 28/334 (8%)
 Frame = -1

Query: 1077 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 898
            MEIPV++RIS FE  I+ LQNPS +S+   LS  E+  +  SFW WGAL++AL+A+FT+ 
Sbjct: 1    MEIPVINRISDFETGISSLQNPSFLSQILALSGAEKIHQAYSFWKWGALLLALVASFTTI 60

Query: 897  ISRLKLVVYRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR- 721
            I+R+K++V RF+    + +  L+                                  SR 
Sbjct: 61   INRIKILVIRFKNHPFISSPSLITNQEDGDYESETDLSCSSSISLSDEEQEEEPPSTSRS 120

Query: 720  ------YDEDFTVAGN---YEETQGHNSKFKLTRRNSCSF-DNFSWSDFVNGKSVVKSWD 571
                  +DEDF V G+   Y + Q  N  F+L RR + S  D FS SDF N ++VVK WD
Sbjct: 121  WWSINDHDEDFCVRGSGNRYIDDQWQNGNFRLRRRRNSSIGDFFSLSDFTNERNVVKLWD 180

Query: 570  GLGLGLNFE-----KASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAAGLET 406
             LGLGL F       +  +++S +D+N      S     C   + +  SP          
Sbjct: 181  NLGLGLGFNLNNGGDSRSAVVSFYDINNERNICSIFGSKCD--SFTAVSP---------- 228

Query: 405  SRNVALQVFDTRVGRQIPQIFAEWQPRRK------------FEKLYIQNDVSVNNRAVVV 262
                       RVG ++P++FAE +P                +K+Y+++DV+     + V
Sbjct: 229  -----------RVGFRMPEVFAELRPMLGKIVGVSGGGGGGAKKVYVRDDVTGE---LTV 274

Query: 261  RDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQE 160
             DIRKV   L N+TESDV+TWWD+DAVIV+   E
Sbjct: 275  GDIRKVSSPLVNVTESDVDTWWDADAVIVEDECE 308


>ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|222852223|gb|EEE89770.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  152 bits (383), Expect = 2e-34
 Identities = 108/326 (33%), Positives = 155/326 (47%), Gaps = 20/326 (6%)
 Frame = -1

Query: 1077 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 898
            MEIPV++RIS FE  +  LQNP+ +S+   LS +E+  +  SFW WGALI+AL A+FT+ 
Sbjct: 1    MEIPVINRISDFETGLASLQNPTFLSQILALSGVEKIHQAYSFWKWGALILALAASFTAI 60

Query: 897  ISRLKLVVYRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR- 721
            I+R+K+++ RF+    + +  L+                                  SR 
Sbjct: 61   INRIKILIIRFKNHPFISSPSLISNQEDCDYESETDLSCSSSISLSDDEQEEESTSSSRS 120

Query: 720  ------YDEDFTVAGN---YEETQGHNSKFKL-TRRNSCSFDNFSWSDFVNGKSVVKSWD 571
                  +D+DF V G+   Y + Q     F+L  RRNS   D FS +DF NGK+VVK WD
Sbjct: 121  WWSINDHDQDFRVRGSGNRYIDDQCQGGNFRLRRRRNSSIGDFFSLTDFTNGKNVVKLWD 180

Query: 570  GLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAAGLETSRNVA 391
             LGL  N   +  S +SLW                                         
Sbjct: 181  NLGLKTNL--SGHSSLSLW----------------------------------------- 197

Query: 390  LQVFDTRVGRQIPQIFAEWQPR---------RKFEKLYIQNDVSVNNRAVVVRDIRKVDL 238
                DTRVG ++P++FAE +P             EK+Y+++DV+     + V D+RK   
Sbjct: 198  ----DTRVGFRVPEVFAELRPTLGKIVGVVVGGVEKVYVRDDVT---GELTVGDMRKPSS 250

Query: 237  LLENLTESDVNTWWDSDAVIVDGNQE 160
             L N+TESDV+TWW++DAVIV+   E
Sbjct: 251  PLVNVTESDVDTWWETDAVIVENECE 276


>ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago truncatula]
            gi|355515966|gb|AES97589.1| hypothetical protein
            MTR_5g056480 [Medicago truncatula]
          Length = 314

 Score =  120 bits (302), Expect = 5e-25
 Identities = 98/322 (30%), Positives = 155/322 (48%), Gaps = 21/322 (6%)
 Frame = -1

Query: 1077 MEIPVLSRISGFEAEINRLQ-NPSLISRYFHLS--AIEETIKVQSFWTWGALIIALIATF 907
            M++P++ R++ F+A  N LQ NPS  S+    S   I+      +F  WGA+I+AL+ATF
Sbjct: 1    MQVPLIDRLNDFQAGFNSLQQNPSFPSQITATSFNGIQSVSIAFNFCKWGAVILALVATF 60

Query: 906  TSFISRLKLVVYRFQRGNSV---ITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 736
            TS I+++ + +   ++  S    IT                                   
Sbjct: 61   TSLINKVTIFIIHLRKKASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSM 120

Query: 735  XXXSRYDEDFTVAGN---YEETQGHNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKSWD-- 571
               S + + F + GN   Y+      ++    RR     D FS  +  NG +VVK WD  
Sbjct: 121  SSSSSFKDFFRLTGNSNDYDVNNVFQTQNSGHRRQHSIGDFFSLLELANGDNVVKLWDSI 180

Query: 570  GLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAAGLETSRNVA 391
            G GLGL+F++  + +IS    N +   +S ++           SP VIV+AG     N+A
Sbjct: 181  GFGLGLDFDEYEDGVIS--STNPHAPLTSAAA-----------SPDVIVSAGEGAHGNLA 227

Query: 390  LQVFDTRVGRQIPQIFAEWQP---------RRKFEKLYIQNDVSVNNRAVVVRDIRKVDL 238
            ++++DTR+ R+ P + AEW P             +K+Y++++     + + V D+RKV  
Sbjct: 228  VEIWDTRLRRRKPSVVAEWGPTVGNTLRVESGGVQKVYVRDN---GRQRLTVGDMRKVSF 284

Query: 237  LLENLTESDV-NTWWDSDAVIV 175
             L N+TESD  NTWWD+DAVIV
Sbjct: 285  PLGNVTESDADNTWWDADAVIV 306


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