BLASTX nr result

ID: Coptis25_contig00016585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016585
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|2...   541   e-151
ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|2...   533   e-149
ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...   531   e-148
emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japon...   531   e-148
dbj|BAF98580.1| CM0216.440.nc [Lotus japonicus]                       531   e-148

>ref|XP_002321558.1| predicted protein [Populus trichocarpa] gi|222868554|gb|EEF05685.1|
            predicted protein [Populus trichocarpa]
          Length = 1218

 Score =  541 bits (1394), Expect = e-151
 Identities = 268/379 (70%), Positives = 307/379 (81%)
 Frame = -1

Query: 1220 DWVEDLDIDDVIGLQNGSVEIVIKNGEVIXXXXXXXXXXXXXXXLPPEVVSPKTSVSGRS 1041
            DW E+LD+ DV GLQNG V  ++++GE                 LPPE  +P+ SVS RS
Sbjct: 840  DWGEELDMVDVDGLQNGDVSAILEDGEAAEENEEEGGWDLEDLELPPEADTPRASVSARS 899

Query: 1040 SVFITPTLGMPVSQSWIKDSSLAGEHAAAGNFDTAMRLLNRQLGIKNFTPLKAMFLDMYV 861
            SVF+ PT GMPVSQ WI+ SSLA EHAAAGNFDTAMRLLNRQLGIKNF PLK+MFLD+Y 
Sbjct: 900  SVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFVPLKSMFLDLYS 959

Query: 860  GSQSYLRAFDSAPVVLLEIEKGWIEASNCNARCAPALVLNFSQLDDKLKAAYRATKDGKF 681
            GS +YLRAF S PV+ L +E+GW E+++ N R  PALV NFSQL++KLKA Y+AT  GKF
Sbjct: 960  GSHTYLRAFSSTPVISLAVERGWNESASPNVRGPPALVFNFSQLEEKLKAGYKATTTGKF 1019

Query: 680  TEALRLFVSILQTIPLIVVDSRREVDEVKELIVIAKEYVIGLTMEVMRKEIKDDITRQQE 501
            TEALRLF+ IL TIPLIVVDSRREVDEVKELI+I KEYV+GL ME+ R+E+KD+  RQQE
Sbjct: 1020 TEALRLFLGILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQMELKRREMKDNPVRQQE 1079

Query: 500  LAAYFTHCNLQTVHLRLALVNAMTICFKAGNYMTSATFARRLIETNPPNENQAKKARQVL 321
            LAAYFTHCNLQ  HLRLAL NAMT+CFK  N  T+A FARRL+ETNPPNENQA+ ARQVL
Sbjct: 1080 LAAYFTHCNLQAPHLRLALQNAMTVCFKNKNLATAANFARRLLETNPPNENQARAARQVL 1139

Query: 320  QACERNMKDATDLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSTEGSICAVCE 141
             A ER+M DA  LNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPS EG +C VC+
Sbjct: 1140 AAAERSMTDAAQLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSQEGQLCTVCD 1199

Query: 140  LAVVGSDASGLLCSPTQMR 84
            LAVVG+DASGLLCSP+Q+R
Sbjct: 1200 LAVVGADASGLLCSPSQIR 1218


>ref|XP_002318013.1| predicted protein [Populus trichocarpa] gi|222858686|gb|EEE96233.1|
            predicted protein [Populus trichocarpa]
          Length = 1220

 Score =  533 bits (1374), Expect = e-149
 Identities = 264/380 (69%), Positives = 306/380 (80%), Gaps = 1/380 (0%)
 Frame = -1

Query: 1220 DWVEDLDIDDVIGLQNGSVEIVIKNGEVIXXXXXXXXXXXXXXXL-PPEVVSPKTSVSGR 1044
            DW E+LD+ D +GLQNG V  ++++GE                   PPE  +P+ SVS R
Sbjct: 841  DWGEELDMVDAVGLQNGDVTAILEDGEAAEENEEEEGGWDLEDLELPPEADTPRASVSAR 900

Query: 1043 SSVFITPTLGMPVSQSWIKDSSLAGEHAAAGNFDTAMRLLNRQLGIKNFTPLKAMFLDMY 864
            SSVF+ PT GMPVSQ WI+ SSLA EHAAAGNFDTAMRLLNRQLGIKNF PLK MFLD++
Sbjct: 901  SSVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFVPLKPMFLDLH 960

Query: 863  VGSQSYLRAFDSAPVVLLEIEKGWIEASNCNARCAPALVLNFSQLDDKLKAAYRATKDGK 684
             GS +YLRAF S PV+ L +E+GW ++++ N R  PALV +FSQL++KLKA Y+AT  GK
Sbjct: 961  SGSHTYLRAFSSTPVISLAVERGWNKSASPNVRAPPALVFDFSQLEEKLKAGYKATTAGK 1020

Query: 683  FTEALRLFVSILQTIPLIVVDSRREVDEVKELIVIAKEYVIGLTMEVMRKEIKDDITRQQ 504
            FTEAL+LF+SIL TIPLIVVDSRREVDEVKELI+I KEYV+GL ME+ R+E+KD+  RQQ
Sbjct: 1021 FTEALKLFLSILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQMELKRREMKDNPVRQQ 1080

Query: 503  ELAAYFTHCNLQTVHLRLALVNAMTICFKAGNYMTSATFARRLIETNPPNENQAKKARQV 324
            ELAAYFTHCNLQ  HLRLAL NAMT+CFK  N  T+A FARRL+ETNPPNENQA+ ARQV
Sbjct: 1081 ELAAYFTHCNLQAPHLRLALQNAMTVCFKNKNLATAANFARRLLETNPPNENQARSARQV 1140

Query: 323  LQACERNMKDATDLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSTEGSICAVC 144
            L A ERNM DA  LNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPS EG +C VC
Sbjct: 1141 LAASERNMTDAAQLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSHEGQLCTVC 1200

Query: 143  ELAVVGSDASGLLCSPTQMR 84
            +LAVVG+DASGLLCSP+Q+R
Sbjct: 1201 DLAVVGADASGLLCSPSQIR 1220


>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
            gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
            putative [Ricinus communis]
          Length = 1217

 Score =  531 bits (1368), Expect = e-148
 Identities = 264/379 (69%), Positives = 307/379 (81%)
 Frame = -1

Query: 1220 DWVEDLDIDDVIGLQNGSVEIVIKNGEVIXXXXXXXXXXXXXXXLPPEVVSPKTSVSGRS 1041
            DW  DLDIDDV GLQNG V  ++++GEV                 PPE  +P+ SVS RS
Sbjct: 840  DWGGDLDIDDVDGLQNGDVSGILEDGEVADENGEGGWDLEDLEL-PPEADTPRASVSARS 898

Query: 1040 SVFITPTLGMPVSQSWIKDSSLAGEHAAAGNFDTAMRLLNRQLGIKNFTPLKAMFLDMYV 861
            SVF+ PT GMPVSQ WI+ SSLA EHAAAGNFDTAMRLLNRQLGI+NF PL++MFLD++ 
Sbjct: 899  SVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIRNFAPLRSMFLDLHT 958

Query: 860  GSQSYLRAFDSAPVVLLEIEKGWIEASNCNARCAPALVLNFSQLDDKLKAAYRATKDGKF 681
            GS +YLRAF S PV+ L +E+GW E+++ N R  PALV NFSQL++KLKA YRAT  GKF
Sbjct: 959  GSHTYLRAFSSTPVISLAVERGWSESASPNVRGPPALVFNFSQLEEKLKAGYRATTAGKF 1018

Query: 680  TEALRLFVSILQTIPLIVVDSRREVDEVKELIVIAKEYVIGLTMEVMRKEIKDDITRQQE 501
            TEALRLF+SIL T+PLIVV+SRREVDEVKELI+I KEYV+   ME+ R+E+KD+  RQQE
Sbjct: 1019 TEALRLFLSILHTVPLIVVESRREVDEVKELIIIVKEYVLASKMELKRREMKDNPIRQQE 1078

Query: 500  LAAYFTHCNLQTVHLRLALVNAMTICFKAGNYMTSATFARRLIETNPPNENQAKKARQVL 321
            LAAYFTHCNLQ  HLRLAL NAMT+CFKA N  T+A FARRL+ETNP  ENQAK ARQVL
Sbjct: 1079 LAAYFTHCNLQMPHLRLALQNAMTVCFKAKNLATAANFARRLLETNPTIENQAKMARQVL 1138

Query: 320  QACERNMKDATDLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSTEGSICAVCE 141
            QA ERNM DA++LNYDFRNPFV CGATYVPIYRGQKD+SCP+C SRFVPS EG +C+VC+
Sbjct: 1139 QAAERNMTDASELNYDFRNPFVTCGATYVPIYRGQKDISCPFCSSRFVPSQEGQLCSVCD 1198

Query: 140  LAVVGSDASGLLCSPTQMR 84
            LAVVG+DASGLLCSPTQ+R
Sbjct: 1199 LAVVGADASGLLCSPTQIR 1217


>emb|CAE45585.1| coatomer alpha subunit-like protein [Lotus japonicus]
          Length = 1221

 Score =  531 bits (1367), Expect = e-148
 Identities = 266/379 (70%), Positives = 307/379 (81%)
 Frame = -1

Query: 1220 DWVEDLDIDDVIGLQNGSVEIVIKNGEVIXXXXXXXXXXXXXXXLPPEVVSPKTSVSGRS 1041
            DW E+LD+ DV GLQNG V  ++ +GEV                LPPE  +PK SVS RS
Sbjct: 843  DWGEELDMVDVDGLQNGDVAAILDDGEVGEEGDEEGGWEMEDLELPPEAETPKASVSSRS 902

Query: 1040 SVFITPTLGMPVSQSWIKDSSLAGEHAAAGNFDTAMRLLNRQLGIKNFTPLKAMFLDMYV 861
            SVF+TPT GM VSQ WI+ SSLA +HAAAGNFDTAMRLLNRQLGIKNF PLK++FLD++ 
Sbjct: 903  SVFVTPTPGMAVSQIWIQRSSLAADHAAAGNFDTAMRLLNRQLGIKNFAPLKSLFLDLHS 962

Query: 860  GSQSYLRAFDSAPVVLLEIEKGWIEASNCNARCAPALVLNFSQLDDKLKAAYRATKDGKF 681
            GS SYLRAF SAPVV L +E+GW E+S+ N R  PAL     QLD+KLKA Y+AT  GKF
Sbjct: 963  GSHSYLRAFSSAPVVSLAVERGWNESSSPNVRGPPALPFKLPQLDEKLKAGYKATTAGKF 1022

Query: 680  TEALRLFVSILQTIPLIVVDSRREVDEVKELIVIAKEYVIGLTMEVMRKEIKDDITRQQE 501
            TEALR FV+IL TIPLIVV+SRREVD+VKELI+I KEYV+GL ME+ R+EIKDD  RQQE
Sbjct: 1023 TEALRTFVNILNTIPLIVVESRREVDDVKELIIIVKEYVLGLKMELKRREIKDDPARQQE 1082

Query: 500  LAAYFTHCNLQTVHLRLALVNAMTICFKAGNYMTSATFARRLIETNPPNENQAKKARQVL 321
            LAAYFTHCNLQT HLRLAL+NAMT+C+KA N  T+A FARRL+ETNP  ENQAK ARQVL
Sbjct: 1083 LAAYFTHCNLQTPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPNIENQAKTARQVL 1142

Query: 320  QACERNMKDATDLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSTEGSICAVCE 141
             A E+NM DAT+LNYDFRNPFV+CG+TYVPIYRGQKDVSCPYC SRFVPS EG +CAVC+
Sbjct: 1143 AAAEKNMTDATELNYDFRNPFVICGSTYVPIYRGQKDVSCPYCTSRFVPSQEGQLCAVCD 1202

Query: 140  LAVVGSDASGLLCSPTQMR 84
            L+VVG+DASGLLCSP+Q+R
Sbjct: 1203 LSVVGADASGLLCSPSQVR 1221


>dbj|BAF98580.1| CM0216.440.nc [Lotus japonicus]
          Length = 832

 Score =  531 bits (1367), Expect = e-148
 Identities = 266/379 (70%), Positives = 307/379 (81%)
 Frame = -1

Query: 1220 DWVEDLDIDDVIGLQNGSVEIVIKNGEVIXXXXXXXXXXXXXXXLPPEVVSPKTSVSGRS 1041
            DW E+LD+ DV GLQNG V  ++ +GEV                LPPE  +PK SVS RS
Sbjct: 454  DWGEELDMVDVDGLQNGDVAAILDDGEVGEEGDEEGGWEMEDLELPPEAETPKASVSSRS 513

Query: 1040 SVFITPTLGMPVSQSWIKDSSLAGEHAAAGNFDTAMRLLNRQLGIKNFTPLKAMFLDMYV 861
            SVF+TPT GM VSQ WI+ SSLA +HAAAGNFDTAMRLLNRQLGIKNF PLK++FLD++ 
Sbjct: 514  SVFVTPTPGMAVSQIWIQRSSLAADHAAAGNFDTAMRLLNRQLGIKNFAPLKSLFLDLHS 573

Query: 860  GSQSYLRAFDSAPVVLLEIEKGWIEASNCNARCAPALVLNFSQLDDKLKAAYRATKDGKF 681
            GS SYLRAF SAPVV L +E+GW E+S+ N R  PAL     QLD+KLKA Y+AT  GKF
Sbjct: 574  GSHSYLRAFSSAPVVSLAVERGWNESSSPNVRGPPALPFKLPQLDEKLKAGYKATTAGKF 633

Query: 680  TEALRLFVSILQTIPLIVVDSRREVDEVKELIVIAKEYVIGLTMEVMRKEIKDDITRQQE 501
            TEALR FV+IL TIPLIVV+SRREVD+VKELI+I KEYV+GL ME+ R+EIKDD  RQQE
Sbjct: 634  TEALRTFVNILNTIPLIVVESRREVDDVKELIIIVKEYVLGLKMELKRREIKDDPARQQE 693

Query: 500  LAAYFTHCNLQTVHLRLALVNAMTICFKAGNYMTSATFARRLIETNPPNENQAKKARQVL 321
            LAAYFTHCNLQT HLRLAL+NAMT+C+KA N  T+A FARRL+ETNP  ENQAK ARQVL
Sbjct: 694  LAAYFTHCNLQTPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPNIENQAKTARQVL 753

Query: 320  QACERNMKDATDLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSTEGSICAVCE 141
             A E+NM DAT+LNYDFRNPFV+CG+TYVPIYRGQKDVSCPYC SRFVPS EG +CAVC+
Sbjct: 754  AAAEKNMTDATELNYDFRNPFVICGSTYVPIYRGQKDVSCPYCTSRFVPSQEGQLCAVCD 813

Query: 140  LAVVGSDASGLLCSPTQMR 84
            L+VVG+DASGLLCSP+Q+R
Sbjct: 814  LSVVGADASGLLCSPSQVR 832


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