BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016551
         (1666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chlorop...   425   e-116
ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chlorop...   376   e-102
ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chlorop...   376   e-102
ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago trun...   358   2e-96
ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group] g...   354   3e-95

>ref|XP_002278671.2| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Vitis
            vinifera] gi|297734333|emb|CBI15580.3| unnamed protein
            product [Vitis vinifera]
          Length = 410

 Score =  425 bits (1093), Expect = e-116
 Identities = 213/395 (53%), Positives = 263/395 (66%), Gaps = 43/395 (10%)
 Frame = -2

Query: 1365 TASEAIDTLTDNDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXX 1186
            T S A+DT+T     +++T   + HPWPEWV+FI++L + GYF ++L             
Sbjct: 36   TCSAAVDTVT-----ADSTDSHHRHPWPEWVTFIDRLKTKGYFSEAL------------- 77

Query: 1185 XXDAVIGTTNRDLNKLRNASLTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKR 1006
                     + ++N  ++A L F+RDRFD+F+SLSR+ IQT+VE GCP+LFRKAVNSAKR
Sbjct: 78   ---PASADYDTNMNLFKDACLIFARDRFDVFKSLSRKDIQTVVEGGCPNLFRKAVNSAKR 134

Query: 1005 LRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEK 826
            LRAF++LDEGDVCSACNLRGSCDRAY +LK+SEA+ARTVDIVR+LL YALDP+V SG EK
Sbjct: 135  LRAFVRLDEGDVCSACNLRGSCDRAYVLLKESEAAARTVDIVRILLFYALDPLVTSG-EK 193

Query: 825  PHGREQIEASARKLLSELVELSETPPDPALPKPAINPPRVSQ------------------ 700
            P GRE +E SARKLLSEL+ELS+TP DPAL KPA  PPR  +                  
Sbjct: 194  PPGRELVEVSARKLLSELIELSDTPLDPALAKPAAIPPRRKEQHMNLTDDEMPQNVQMKK 253

Query: 699  -------------------------GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLE 595
                                     G  R+    +EMK+GDW CP C FMNF+RNIRCL+
Sbjct: 254  GDWICPNCNFLNFARNTQCMKCREDGPKRDSLNVIEMKKGDWTCPECNFMNFSRNIRCLK 313

Query: 594  CKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPK 415
            C+A+GP RV+  DI  KKGDW CPQC FMNFA  T+C R  C EPRPKR L PGEWECP 
Sbjct: 314  CRAEGPKRVDAADIPMKKGDWNCPQCAFMNFASKTECFR--CREPRPKRQLNPGEWECPS 371

Query: 414  CDFLNYRRNKFCLKCSCDKPKDEVAEYEDIIWKRP 310
            CDF+NYRRN  CLKC+ D+PK+    YE+ +WK+P
Sbjct: 372  CDFVNYRRNTVCLKCNRDQPKEAATPYEEHVWKKP 406


>ref|XP_004160413.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
            sativus]
          Length = 445

 Score =  376 bits (966), Expect = e-102
 Identities = 185/373 (49%), Positives = 238/373 (63%), Gaps = 44/373 (11%)
 Frame = -2

Query: 1293 HPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNASLTFS 1114
            HPWPEWVSF++ L + GY  +                   VI  +  D+N L++A ++F+
Sbjct: 66   HPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYS--DMNVLKDACVSFA 123

Query: 1113 RDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDR 934
            RDRFDIF+SLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRGSCDR
Sbjct: 124  RDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDR 183

Query: 933  AYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSET 754
            AY ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L ELSE 
Sbjct: 184  AYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEK 243

Query: 753  PPDPALPKPAINPPRVSQ------------------------------------------ 700
            P DPA  +    PP   +                                          
Sbjct: 244  PLDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNE 303

Query: 699  -GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCP 523
             G  R    D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++  + KKGDW CP
Sbjct: 304  DGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCP 363

Query: 522  QCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDEV 343
            QC FMNFA N KC+R  C E RPKR+L  GEWECP C ++N+R N  C KC+ ++P+ E+
Sbjct: 364  QCSFMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEI 421

Query: 342  A-EYEDIIWKRPR 307
            + EYE+ +W+ PR
Sbjct: 422  SDEYEEQLWESPR 434


>ref|XP_004137347.1| PREDICTED: zinc finger protein VAR3, chloroplastic-like [Cucumis
            sativus]
          Length = 445

 Score =  376 bits (966), Expect = e-102
 Identities = 185/373 (49%), Positives = 238/373 (63%), Gaps = 44/373 (11%)
 Frame = -2

Query: 1293 HPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNASLTFS 1114
            HPWPEWVSF++ L + GY  +                   VI  +  D+N L++A ++F+
Sbjct: 66   HPWPEWVSFVDGLKTKGYLIEPPSEDATGDGTGGEAATPPVIDYS--DMNVLKDACVSFA 123

Query: 1113 RDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDR 934
            RDRFDIF+SLS + IQT+V+ GCP+L RKAVNSAKRLRA+++LDEGDVCS CNLRGSCDR
Sbjct: 124  RDRFDIFKSLSTDDIQTIVKDGCPNLLRKAVNSAKRLRAYVQLDEGDVCSTCNLRGSCDR 183

Query: 933  AYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSET 754
            AY ILK ++ +ARTVD+ R+LL YALDP+VLSG +KP GRE +E S RKLLS+L ELSE 
Sbjct: 184  AYVILKQTDGTARTVDVARLLLAYALDPLVLSGGDKPSGREHVEVSVRKLLSDLSELSEK 243

Query: 753  PPDPALPKPAINPPRVSQ------------------------------------------ 700
            P DPA  +    PP   +                                          
Sbjct: 244  PIDPAAVREVTKPPTRKEKSSKFTEDASTRDVEMKRGDWMCTKCNFLNFSRNRTCLKCNE 303

Query: 699  -GMGREPSKDVEMKRGDWICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCP 523
             G  R    D+EMK GDWICP C FMNF+RNIRC++CK +GP +VN++  + KKGDW CP
Sbjct: 304  DGPKRVRENDIEMKSGDWICPECKFMNFSRNIRCIKCKTEGPKKVNVEQAEMKKGDWVCP 363

Query: 522  QCQFMNFARNTKCIRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDEV 343
            QC FMNFA N KC+R  C E RPKR+L  GEWECP C ++N+R N  C KC+ ++P+ E+
Sbjct: 364  QCSFMNFASNKKCLR--CRELRPKRELNRGEWECPMCAYVNFRGNMSCRKCNAERPEQEI 421

Query: 342  A-EYEDIIWKRPR 307
            + EYE+ +W+ PR
Sbjct: 422  SDEYEEQLWESPR 434


>ref|XP_003619821.1| E3 SUMO-protein ligase RanBP2 [Medicago truncatula]
            gi|355494836|gb|AES76039.1| E3 SUMO-protein ligase RanBP2
            [Medicago truncatula]
          Length = 470

 Score =  358 bits (919), Expect = 2e-96
 Identities = 196/403 (48%), Positives = 240/403 (59%), Gaps = 51/403 (12%)
 Frame = -2

Query: 1410 PYSFISKPLILKSYTTASEAIDTLTDNDGSSETTSFSYSHPWPEWVSFIEKLNSNGYFDK 1231
            P+ F   PL    + T+  A  T T    + E +  S  HPWPEW+SF+++L + GY  K
Sbjct: 29   PFLFFKPPLHHHRHQTSFSAFSTSTA--AAEEESLSSTVHPWPEWISFVDRLRAKGYLSK 86

Query: 1230 SLLPXXXXXXXXXXXXXDAVIGTTNRDLNKLRNASLTFSRDRFDIFRSLSREHIQTMVEC 1051
            S                 A   +   D+N L++ASL+F+RDR+D+F+ LS E IQ +VE 
Sbjct: 87   S-----------------ADDNSVYSDINLLKDASLSFARDRYDVFKLLSSEDIQAVVED 129

Query: 1050 GCPSLFRKAVNSAKRLRAFLKLDEGDVCSACNLRGSCDRAYGILKDSEASARTVDIVRML 871
            GCP+  RKAVNSAKRLRA L+LDEGDVCSACNLRGSCDRAY ILK+SEA ARTVDIVR+L
Sbjct: 130  GCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEADARTVDIVRIL 189

Query: 870  LIYALDPIVLSGEEKPHGREQIEASARKLLSELVELSE-TPPDPALP--------KPAIN 718
            L YA+DP+VLSG EKP GRE IE+SARKLLS+L+ELSE +PP P LP        K    
Sbjct: 190  LFYAIDPLVLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYSKSTSQKDVSK 249

Query: 717  PPRVSQGMGREPSKDVEMKR---------------------------------------G 655
               +S       SK+VEMK+                                       G
Sbjct: 250  VKPLSFKAAEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNCEEDGPKSDDPRTFEMKEG 309

Query: 654  DWICPNCTFMNFARNIRCLECKADGPNRVN---IDDIDKKKGDWTCPQCQFMNFARNTKC 484
            DWIC  C FMNF+RNI CLECK +GP RVN    +++  KKGDWTCPQC FMNFA N KC
Sbjct: 310  DWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDWTCPQCGFMNFASNVKC 369

Query: 483  IRPHCGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKP 355
             +  C EPRPK+   PG+W CPKCDF+N+     C +C    P
Sbjct: 370  FK--CPEPRPKK--HPGDWSCPKCDFMNFASKDKCFRCQESNP 408


>ref|NP_001051041.1| Os03g0708900 [Oryza sativa Japonica Group]
            gi|108710694|gb|ABF98489.1| Zn-finger in Ran binding
            protein and others containing protein, expressed [Oryza
            sativa Japonica Group] gi|113549512|dbj|BAF12955.1|
            Os03g0708900 [Oryza sativa Japonica Group]
            gi|215707047|dbj|BAG93507.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218193617|gb|EEC76044.1|
            hypothetical protein OsI_13224 [Oryza sativa Indica
            Group] gi|222625654|gb|EEE59786.1| hypothetical protein
            OsJ_12297 [Oryza sativa Japonica Group]
          Length = 504

 Score =  354 bits (909), Expect = 3e-95
 Identities = 173/342 (50%), Positives = 222/342 (64%), Gaps = 26/342 (7%)
 Frame = -2

Query: 1293 HPWPEWVSFIEKLNSNGYFDKSLLPXXXXXXXXXXXXXDAVIGTT-------------NR 1153
            HPWPEW  F+EKL + GYF++  L               A                  ++
Sbjct: 58   HPWPEWGDFLEKLRAKGYFEQPTLASRADAAEGEVAATAAAAAAAAGEDPGASADNYPSK 117

Query: 1152 DLNKLRNASLTFSRDRFDIFRSLSREHIQTMVECGCPSLFRKAVNSAKRLRAFLKLDEGD 973
            DLN+L+NA L F R+RFD+   L ++ I+ +VECGCP++FRK VNSAKRLR FL++DEGD
Sbjct: 118  DLNRLKNACLKFGRERFDLLSVLPKQDIRAIVECGCPNIFRKPVNSAKRLREFLQIDEGD 177

Query: 972  VCSACNLRGSCDRAYGILKDSEASARTVDIVRMLLIYALDPIVLSGEEKPHGREQIEASA 793
             CSAC LRGSCD+AY ++ ++E  ARTVD++R+LL YA+DP  LSGE   +G   ++ SA
Sbjct: 178  ACSACKLRGSCDKAY-VIPNAEDEARTVDVMRILLNYAIDPTSLSGENSVNG--GVQESA 234

Query: 792  RKLLSELVELSETPPDPALPKP-------------AINPPRVSQGMGREPSKDVEMKRGD 652
            RKLLSEL  LS+T  DP++PKP              I  P+ S G GRE + + EMK+GD
Sbjct: 235  RKLLSELTMLSDTTIDPSIPKPVFQTSSKTKTFDKGIAKPKFSAGKGRE-TTETEMKKGD 293

Query: 651  WICPNCTFMNFARNIRCLECKADGPNRVNIDDIDKKKGDWTCPQCQFMNFARNTKCIRPH 472
            W+CPNC F+NFARN  CLECKADGP ++     + K GDW CPQC FMNFARN  C +  
Sbjct: 294  WLCPNCNFLNFARNRHCLECKADGPKKIETATTEMKTGDWICPQCHFMNFARNKMCFK-- 351

Query: 471  CGEPRPKRDLQPGEWECPKCDFLNYRRNKFCLKCSCDKPKDE 346
            C E RPKR L PGEWECP C F+N+RRNK CLKC  + P+++
Sbjct: 352  CEESRPKRQLIPGEWECPSCSFVNFRRNKVCLKCKHEGPEND 393