BLASTX nr result

ID: Coptis25_contig00016537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016537
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resista...   111   5e-23
ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [S...   102   4e-20
ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Sela...    71   8e-11
ref|XP_002961699.1| ATP-binding cassette transporter [Selaginell...    71   1e-10

>ref|XP_002319469.1| predicted protein [Populus trichocarpa] gi|222857845|gb|EEE95392.1|
           predicted protein [Populus trichocarpa]
          Length = 1605

 Score =  119 bits (297), Expect = 3e-25
 Identities = 50/63 (79%), Positives = 56/63 (88%)
 Frame = +1

Query: 175 AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYTNPCTNYLGQ 354
           AGL+VSI LLFSGFVIYPSN+P YWKWLMYV P+HWANVSFC  QF +GY +PC+NYLGQ
Sbjct: 802 AGLLVSIFLLFSGFVIYPSNMPNYWKWLMYVNPVHWANVSFCRFQFIEGYPDPCSNYLGQ 861

Query: 355 LPF 363
           LPF
Sbjct: 862 LPF 864


>ref|XP_002276895.2| PREDICTED: putative pleiotropic drug resistance protein 7-like
           [Vitis vinifera]
          Length = 1538

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/63 (73%), Positives = 56/63 (88%)
 Frame = +1

Query: 175 AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYTNPCTNYLGQ 354
           +GL++SI LLFSGFVI+PSN+P YWKWL+YV PIH AN+ FC LQF+ GYT+PC+NYLGQ
Sbjct: 732 SGLLISISLLFSGFVIFPSNVPAYWKWLIYVNPIHSANILFCRLQFNNGYTDPCSNYLGQ 791

Query: 355 LPF 363
           LPF
Sbjct: 792 LPF 794


>ref|XP_002443376.1| hypothetical protein SORBIDRAFT_08g018460 [Sorghum bicolor]
           gi|241944069|gb|EES17214.1| hypothetical protein
           SORBIDRAFT_08g018460 [Sorghum bicolor]
          Length = 1532

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/63 (71%), Positives = 51/63 (80%)
 Frame = +1

Query: 175 AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYTNPCTNYLGQ 354
           AGLIVSI LLFSGFVI+PSNIP YWKWLM++ PI WAN+SFC+ QFS GY + C  YL Q
Sbjct: 708 AGLIVSIFLLFSGFVIFPSNIPQYWKWLMHINPIRWANMSFCDRQFSYGYKDFCNKYLNQ 767

Query: 355 LPF 363
           L F
Sbjct: 768 LTF 770


>ref|XP_002964767.1| hypothetical protein SELMODRAFT_406260 [Selaginella moellendorffii]
           gi|300167000|gb|EFJ33605.1| hypothetical protein
           SELMODRAFT_406260 [Selaginella moellendorffii]
          Length = 1600

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +1

Query: 175 AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYTNPCTNY 345
           AGL+VS+ LLFSGFVI+PS  P YWKW++   P+ W NV FC  +F   Y   C ++
Sbjct: 788 AGLVVSLGLLFSGFVIFPSLTPSYWKWMLSANPLRWGNVIFCMAEFLNRYHESCQDF 844


>ref|XP_002961699.1| ATP-binding cassette transporter [Selaginella moellendorffii]
           gi|300170358|gb|EFJ36959.1| ATP-binding cassette
           transporter [Selaginella moellendorffii]
          Length = 1583

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +1

Query: 175 AGLIVSILLLFSGFVIYPSNIPPYWKWLMYVTPIHWANVSFCNLQFSKGYTNPCTNY 345
           AGL+VS+ LLFSGFVI+PS  P YWKW++   P+ W NV FC  +F   Y   C ++
Sbjct: 788 AGLVVSLGLLFSGFVIFPSLTPRYWKWMLSANPLRWGNVIFCMAEFLNRYHESCQDF 844


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