BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016534
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    88   2e-15
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    84   3e-14
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    81   2e-13

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 10/206 (4%)
 Frame = +2

Query: 74  SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 250
           +QLP  ++++I KKI    D + F  VC  W+ S++P  P++L  + PWL++P +  + S
Sbjct: 6   TQLPPELIEIISKKITIYSDYLHFQAVCHAWK-SSIPKTPNHLPPQLPWLLLPQSQSNQS 64

Query: 251 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHR--ICGSCRGGWLVTVNSFGDIQLLHPFA 424
                      FF+LST K + ++LPE A+HR   CGS   GWL+ ++    I +++P  
Sbjct: 65  SYRA-------FFNLSTYKFHSLNLPE-ASHRKKHCGSSH-GWLIILDDSPSILVINPLT 115

Query: 425 RKVISLAPVTALPGVVSCYYNERQNLVYDVKNYGSLCTIASNCMREFYIYKAVM----LP 592
           R+ I L  +++ P VVS  Y         V   G   T +   MR+ +I K VM    L 
Sbjct: 116 RRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLE 175

Query: 593 WAG---VVMVVHGLNKMLAFCKVSDE 661
             G   V M +      LA+CK  DE
Sbjct: 176 KKGDFFVAMAILCSTGDLAYCKNGDE 201


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 8/212 (3%)
 Frame = +2

Query: 74  SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 250
           SQLP  ++++I K +    D +    VC  WR S +P  P++L  + PWL++P +    +
Sbjct: 6   SQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQSQSN 64

Query: 251 KTGTACDKTLGFFDLSTRKLYKVDLPEIA-NHRICGSCRGGWLVTVNSFGDIQLLHPFAR 427
           ++  A      FF LST K + ++LPE++   R CGS   GWL+ ++    I L++P  R
Sbjct: 65  QSRRA------FFSLSTNKFHFLNLPEVSYRKRHCGSSH-GWLMILDDTPTILLINPLTR 117

Query: 428 KVISLAPVTALPGVVSCYYNERQNLVYDVKN-YGSLCTIASNCMREFYIYKAVMLPWA-- 598
             +SL P+++ P V+S  Y++     Y ++N  G   T++   MR+ +I K V+      
Sbjct: 118 AKLSLPPLSSFPNVISFNYSD-IGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK 176

Query: 599 ---GVVMVVHGLNKMLAFCKVSDENKKWISVQ 685
               VV+ +      LA+C+  D  K W  V+
Sbjct: 177 DNNFVVIAILNQTDDLAYCRNGD--KSWSLVE 206


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
 Frame = +2

Query: 74  SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 250
           S+LPQ +L  I +K     D I    VCK+W  SA+P  P +L  + PWL++P+  D+ +
Sbjct: 5   SELPQELLQTITQKQTNYVDYISTRAVCKSW-WSAIPKKPHDLLCRLPWLLLPHHKDNPN 63

Query: 251 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 430
             G        F++ S  K Y ++LPE  + R CGS   GWLV V     I LL+P  + 
Sbjct: 64  HRG--------FYNPSDGKTYHLELPETVDKRCCGSSH-GWLVMVEDTPSIFLLNPLTKS 114

Query: 431 VISLAPVTALPGVVS--CYYNERQNLVYDVKNYGSLCTIASNCMREFYIYKAVML--PWA 598
            I L  ++  P   +   Y N R    Y ++N           +RE YI KA++   P  
Sbjct: 115 RIELPSLSTFPNFPTEVIYQNSRNLNEYFIRN-------NKLRIRETYIRKAIVSEDPSV 167

Query: 599 GVVMV------VHGLNKMLAFCKVSD 658
           G  MV      ++G ++ +AFCK  D
Sbjct: 168 GSFMVMAIYKTING-SENIAFCKSGD 192


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 68/212 (32%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
 Frame = +2

Query: 74  SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 250
           S+LPQ +L  I +K     D I    VCK+W  SA+P  P +L  + PWL++PY  ++ +
Sbjct: 5   SELPQELLQTITQKQSNYVDYISTRAVCKSW-WSAIPKKPHDLLCQLPWLLLPYHKNNPN 63

Query: 251 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 430
             G        F++L+  K Y ++LPE    R CGS   GWLV V     I LL+P  + 
Sbjct: 64  HRG--------FYNLADGKTYHLELPETIEKRCCGSSH-GWLVMVEDTPSIFLLNPLTKA 114

Query: 431 VISLAPVTALPGVVSCYYNERQNLVYDVKNYGSLCTIASNCMREFYIYKAVML--PWAG- 601
            I L  ++  P   +    E    + +  N     T A   +RE YI KA++   P  G 
Sbjct: 115 RIELPSLSTFPYFPTEVVYENSRNINEYFN-----TKAKLRIRETYIRKAIVSEDPSTGN 169

Query: 602 -VVMVVH---GLNKMLAFCKVSDENKKWISVQ 685
             VM ++      + +AFCK  D    W ++Q
Sbjct: 170 FAVMAIYKTINSTENIAFCKSGDAT--WFTIQ 199


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
 Frame = +2

Query: 74  SQLPQHILDLIPKKIDTLDDLIRFSWVCKTWRLSALPLLPSNLFNK-PWLIVPYTNDHVS 250
           SQL   +LD I KK     D +RF  VC  WR S +P  P +L  + PWL++P +  H +
Sbjct: 5   SQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 251 KTGTACDKTLGFFDLSTRKLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLLHPFARK 430
                      FF LS  K + + LPE ++ R       GWL+ ++   +I LL+P  R 
Sbjct: 64  HRP--------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRS 115

Query: 431 VISLAPVTALPGVVSCYYNERQNLVYDVKNYGSLCTIASNCMREFYIYKAVM--LPWAG- 601
            + L P++  P VV   + +         + G + T +   MR+ +I K ++   P  G 
Sbjct: 116 KVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGS 175

Query: 602 --VVMVVHGLNKMLAFCKVSDEN 664
             + +V+      LA C+ SD++
Sbjct: 176 DFIAVVILNQTGDLALCRKSDDS 198