BLASTX nr result

ID: Coptis25_contig00016531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016531
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282266.1| PREDICTED: vesicle transport protein GOT1A [...   219   9e-55
ref|XP_004152095.1| PREDICTED: vesicle transport protein GOT1B-l...   217   3e-54
ref|NP_001049334.1| Os03g0209400 [Oryza sativa Japonica Group] g...   216   6e-54
ref|XP_003558530.1| PREDICTED: vesicle transport protein GOT1B-l...   216   7e-54
ref|XP_002468303.1| hypothetical protein SORBIDRAFT_01g043350 [S...   216   1e-53

>ref|XP_002282266.1| PREDICTED: vesicle transport protein GOT1A [Vitis vinifera]
           gi|297742166|emb|CBI33953.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  219 bits (558), Expect = 9e-55
 Identities = 102/137 (74%), Positives = 116/137 (84%)
 Frame = +3

Query: 33  FEMNDRKKIXXXXXXXXXXXXXXXVVFLFDKGLLAMGNILFLSGVMMTIGLKSTMQFFMK 212
           FEMNDRKKI               +VFLFDKGLLAMGNILF+SGV +TIGLKST+QFFMK
Sbjct: 4   FEMNDRKKIGLGLTAFGVFFSFLGIVFLFDKGLLAMGNILFISGVTLTIGLKSTVQFFMK 63

Query: 213 RQNYKGTISFGIGFFLVLIGWPIMGMILEAYGFIVLFSGFWPTLVVFLQRMPIVGWIFQQ 392
           RQNYKGTISFG+GFF V+IGWPI+GM+LEAYGFIVLFSGFWPTL VFLQ++P +GW+FQQ
Sbjct: 64  RQNYKGTISFGVGFFFVIIGWPILGMMLEAYGFIVLFSGFWPTLAVFLQKIPFLGWVFQQ 123

Query: 393 PFVTSFLDRYRGRRVPV 443
           PFV SF D+YRG+RVPV
Sbjct: 124 PFVRSFFDKYRGKRVPV 140


>ref|XP_004152095.1| PREDICTED: vesicle transport protein GOT1B-like [Cucumis sativus]
           gi|449502276|ref|XP_004161596.1| PREDICTED: vesicle
           transport protein GOT1B-like [Cucumis sativus]
          Length = 140

 Score =  217 bits (553), Expect = 3e-54
 Identities = 101/137 (73%), Positives = 114/137 (83%)
 Frame = +3

Query: 33  FEMNDRKKIXXXXXXXXXXXXXXXVVFLFDKGLLAMGNILFLSGVMMTIGLKSTMQFFMK 212
           FEMNDRKKI               +VF FDKGLLAMGNILF SGV +TIGLKSTMQFFMK
Sbjct: 4   FEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMK 63

Query: 213 RQNYKGTISFGIGFFLVLIGWPIMGMILEAYGFIVLFSGFWPTLVVFLQRMPIVGWIFQQ 392
           RQN+KGTISFG+GFF V+IGWPI GMILEAYGF+VLFSGFWPTL VFLQ++P++GW+FQQ
Sbjct: 64  RQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQ 123

Query: 393 PFVTSFLDRYRGRRVPV 443
           P+V SF D+YRGRRVPV
Sbjct: 124 PYVRSFFDKYRGRRVPV 140


>ref|NP_001049334.1| Os03g0209400 [Oryza sativa Japonica Group]
           gi|108706782|gb|ABF94577.1| Got1-like family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113547805|dbj|BAF11248.1| Os03g0209400 [Oryza sativa
           Japonica Group] gi|215765455|dbj|BAG87152.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222624427|gb|EEE58559.1| hypothetical protein
           OsJ_09864 [Oryza sativa Japonica Group]
          Length = 140

 Score =  216 bits (551), Expect = 6e-54
 Identities = 103/137 (75%), Positives = 114/137 (83%)
 Frame = +3

Query: 33  FEMNDRKKIXXXXXXXXXXXXXXXVVFLFDKGLLAMGNILFLSGVMMTIGLKSTMQFFMK 212
           FEMND KKI               ++F FDKGL+AMGNILFLSG+ +TIGLKSTMQFF K
Sbjct: 4   FEMNDLKKIGLGLTGFGVFFSFLGIIFFFDKGLIAMGNILFLSGLGLTIGLKSTMQFFTK 63

Query: 213 RQNYKGTISFGIGFFLVLIGWPIMGMILEAYGFIVLFSGFWPTLVVFLQRMPIVGWIFQQ 392
            +NYKGTISFG GFFLVLIGWP  GM+LEAYGF+VLFSGFWPTLVVFLQR+PI+GWIFQQ
Sbjct: 64  PKNYKGTISFGAGFFLVLIGWPFFGMLLEAYGFVVLFSGFWPTLVVFLQRIPIIGWIFQQ 123

Query: 393 PFVTSFLDRYRGRRVPV 443
           PFVTSFLDRYRG+RVPV
Sbjct: 124 PFVTSFLDRYRGKRVPV 140


>ref|XP_003558530.1| PREDICTED: vesicle transport protein GOT1B-like [Brachypodium
           distachyon]
          Length = 140

 Score =  216 bits (550), Expect = 7e-54
 Identities = 103/137 (75%), Positives = 114/137 (83%)
 Frame = +3

Query: 33  FEMNDRKKIXXXXXXXXXXXXXXXVVFLFDKGLLAMGNILFLSGVMMTIGLKSTMQFFMK 212
           FEMND KKI               +VF FDKGL+AMGNILFLSG+ +TIGLKSTMQFF K
Sbjct: 4   FEMNDLKKIGLGLTGFGIFFSFLGIVFFFDKGLIAMGNILFLSGLGLTIGLKSTMQFFTK 63

Query: 213 RQNYKGTISFGIGFFLVLIGWPIMGMILEAYGFIVLFSGFWPTLVVFLQRMPIVGWIFQQ 392
            +NYKGTISFG+GFFLVLIGWP  GM+LEAYGF+VLFSGFWPTL VFLQR+PI+GWIFQQ
Sbjct: 64  PKNYKGTISFGVGFFLVLIGWPFFGMLLEAYGFVVLFSGFWPTLAVFLQRIPILGWIFQQ 123

Query: 393 PFVTSFLDRYRGRRVPV 443
           PFVTSFLDRYRG+RVPV
Sbjct: 124 PFVTSFLDRYRGKRVPV 140


>ref|XP_002468303.1| hypothetical protein SORBIDRAFT_01g043350 [Sorghum bicolor]
           gi|241922157|gb|EER95301.1| hypothetical protein
           SORBIDRAFT_01g043350 [Sorghum bicolor]
          Length = 140

 Score =  216 bits (549), Expect = 1e-53
 Identities = 104/137 (75%), Positives = 113/137 (82%)
 Frame = +3

Query: 33  FEMNDRKKIXXXXXXXXXXXXXXXVVFLFDKGLLAMGNILFLSGVMMTIGLKSTMQFFMK 212
           FEMND KKI               +VF FDKGL+AMGNILFLSG+ +TIGLKSTMQFF K
Sbjct: 4   FEMNDLKKIGLGLTGFGIFFSFLGIVFFFDKGLIAMGNILFLSGLGLTIGLKSTMQFFTK 63

Query: 213 RQNYKGTISFGIGFFLVLIGWPIMGMILEAYGFIVLFSGFWPTLVVFLQRMPIVGWIFQQ 392
            +NYKGTISFG GFFLVLIGWP  GM+LEAYGFIVLFSGFWPTL VFLQR+PI+GWIFQQ
Sbjct: 64  PKNYKGTISFGAGFFLVLIGWPFFGMLLEAYGFIVLFSGFWPTLAVFLQRIPIIGWIFQQ 123

Query: 393 PFVTSFLDRYRGRRVPV 443
           PFVTSFLDRYRG+RVPV
Sbjct: 124 PFVTSFLDRYRGKRVPV 140


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