BLASTX nr result

ID: Coptis25_contig00016515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016515
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E...   219   2e-55
ref|XP_003600356.1| Cellulose synthase-like protein E1 [Medicago...   217   9e-55
ref|XP_003600354.1| Cellulose synthase-like protein E1 [Medicago...   217   9e-55
gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]    208   4e-52
ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|2...   207   6e-52

>ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 736

 Score =  219 bits (558), Expect = 2e-55
 Identities = 93/140 (66%), Positives = 116/140 (82%)
 Frame = -1

Query: 524 GRIKLGLLMGYCSYCLWAPNCLPTLFYSVVPPLFLLKGVSLFPRISSPWFLPFAYVIITE 345
           GRI  GL MGY  YCLWAPNCL TL+YS++P L+LLKG+ LFP+ISSPWF+PFAYVI+ E
Sbjct: 510 GRINFGLQMGYSVYCLWAPNCLATLYYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIVGE 569

Query: 344 NTYSLIEFLLCGGTFQSWWNEQRMWMYKRTTSYFFSFVDTCLKLLGYTNSAFEITAKVSD 165
            TYSL+EF  CGGTFQ WWN+QR+W+YKRT+SY F+ +DT LKL G++ S F IT KV++
Sbjct: 570 TTYSLLEFFFCGGTFQGWWNDQRIWLYKRTSSYLFACIDTILKLFGFSESTFTITTKVTE 629

Query: 164 QDVSQRYEKDIFEFGNSSPM 105
           +D S+R+EK+I EFG SSPM
Sbjct: 630 EDASKRHEKEIMEFGTSSPM 649


>ref|XP_003600356.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489404|gb|AES70607.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 759

 Score =  217 bits (552), Expect = 9e-55
 Identities = 93/140 (66%), Positives = 119/140 (85%)
 Frame = -1

Query: 524 GRIKLGLLMGYCSYCLWAPNCLPTLFYSVVPPLFLLKGVSLFPRISSPWFLPFAYVIITE 345
           G+I L L MGYC+YCLWAPNCL TLFYS++P L+LLKG+ LFP+ISSPWF+PFAYVII E
Sbjct: 525 GKINLSLQMGYCAYCLWAPNCLATLFYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIIGE 584

Query: 344 NTYSLIEFLLCGGTFQSWWNEQRMWMYKRTTSYFFSFVDTCLKLLGYTNSAFEITAKVSD 165
             YSL+EF+L GGTF+ WWN+ R+W+YKRT+SY ++F DT LKL G+++S F ITAKVS+
Sbjct: 585 TIYSLLEFMLSGGTFEGWWNDLRIWLYKRTSSYLYAFSDTILKLFGFSDSLFTITAKVSE 644

Query: 164 QDVSQRYEKDIFEFGNSSPM 105
           ++V +R+EK+I EFG SSPM
Sbjct: 645 EEVVERHEKEIMEFGTSSPM 664


>ref|XP_003600354.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489402|gb|AES70605.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 747

 Score =  217 bits (552), Expect = 9e-55
 Identities = 93/140 (66%), Positives = 119/140 (85%)
 Frame = -1

Query: 524 GRIKLGLLMGYCSYCLWAPNCLPTLFYSVVPPLFLLKGVSLFPRISSPWFLPFAYVIITE 345
           G+I L L MGYC+YCLWAPNCL TLFYS++P L+LLKG+ LFP+ISSPWF+PFAYVII E
Sbjct: 513 GKINLSLQMGYCAYCLWAPNCLATLFYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIIGE 572

Query: 344 NTYSLIEFLLCGGTFQSWWNEQRMWMYKRTTSYFFSFVDTCLKLLGYTNSAFEITAKVSD 165
             YSL+EF+L GGTF+ WWN+ R+W+YKRT+SY ++F DT LKL G+++S F ITAKVS+
Sbjct: 573 TIYSLLEFMLSGGTFEGWWNDLRIWLYKRTSSYLYAFSDTILKLFGFSDSLFTITAKVSE 632

Query: 164 QDVSQRYEKDIFEFGNSSPM 105
           ++V +R+EK+I EFG SSPM
Sbjct: 633 EEVVERHEKEIMEFGTSSPM 652


>gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 736

 Score =  208 bits (529), Expect = 4e-52
 Identities = 91/140 (65%), Positives = 114/140 (81%)
 Frame = -1

Query: 524 GRIKLGLLMGYCSYCLWAPNCLPTLFYSVVPPLFLLKGVSLFPRISSPWFLPFAYVIITE 345
           GRI+LGL +GYC YC WA NC  TL+YS+VP LFLLKG+SLFP++SSPWFLPFAYVI  +
Sbjct: 510 GRIRLGLQLGYCCYCFWASNCFATLYYSIVPSLFLLKGISLFPQVSSPWFLPFAYVIFAK 569

Query: 344 NTYSLIEFLLCGGTFQSWWNEQRMWMYKRTTSYFFSFVDTCLKLLGYTNSAFEITAKVSD 165
             YSL+EFL   GT   WWN+QR+W+YKRT+SY F+ +DT LK LG+ ++AF IT KV+D
Sbjct: 570 YIYSLVEFLWADGTVLGWWNDQRIWLYKRTSSYLFATIDTVLKTLGFGDTAFVITDKVAD 629

Query: 164 QDVSQRYEKDIFEFGNSSPM 105
           +DVSQRYEK++ EFG +SPM
Sbjct: 630 EDVSQRYEKEMMEFGATSPM 649


>ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  207 bits (528), Expect = 6e-52
 Identities = 91/140 (65%), Positives = 113/140 (80%)
 Frame = -1

Query: 524 GRIKLGLLMGYCSYCLWAPNCLPTLFYSVVPPLFLLKGVSLFPRISSPWFLPFAYVIITE 345
           GRI+LGL +GYC YC WA NC  TL+YS+VP LFLLKG+SLFP++SSPWFLPFAYVI  +
Sbjct: 510 GRIRLGLQLGYCCYCFWASNCFATLYYSIVPSLFLLKGISLFPQVSSPWFLPFAYVIFAK 569

Query: 344 NTYSLIEFLLCGGTFQSWWNEQRMWMYKRTTSYFFSFVDTCLKLLGYTNSAFEITAKVSD 165
             YSL+EFL   GT   WWN+QR+W+YKRT+SY F+ +DT LK LG+  +AF IT KV+D
Sbjct: 570 YIYSLVEFLWADGTVLGWWNDQRIWLYKRTSSYLFATIDTILKTLGFGETAFVITDKVAD 629

Query: 164 QDVSQRYEKDIFEFGNSSPM 105
           +DVSQRYEK++ EFG +SPM
Sbjct: 630 EDVSQRYEKEMMEFGATSPM 649


Top