BLASTX nr result
ID: Coptis25_contig00016499
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016499 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK95981.1| unknown [Populus trichocarpa] 291 5e-77 ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2... 285 3e-75 ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ... 284 6e-75 ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ... 279 2e-73 ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2... 278 3e-73 >gb|ABK95981.1| unknown [Populus trichocarpa] Length = 243 Score = 291 bits (744), Expect = 5e-77 Identities = 123/157 (78%), Positives = 141/157 (89%) Frame = -3 Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294 PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSNFV+V+DF+FGA ARY LDREQ Sbjct: 44 PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 103 Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114 CCF PNL+GHTCKH YKH E+G A++WDDAL SMRHF+HK+YNLFTCNCHS+VANCLNR Sbjct: 104 CCFPPNLTGHTCKHGYKHSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNR 163 Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3 LCYGG++ WNM++VA LIL KGHW+ S+VRSF PF Sbjct: 164 LCYGGSMDWNMIDVAVLILFKGHWIDWKSIVRSFLPF 200 >ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1| predicted protein [Populus trichocarpa] Length = 239 Score = 285 bits (729), Expect = 3e-75 Identities = 123/161 (76%), Positives = 141/161 (87%), Gaps = 4/161 (2%) Frame = -3 Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294 PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSNFV+V+DF+FGA ARY LDREQ Sbjct: 36 PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 95 Query: 293 ----CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVAN 126 CCF PNL+GHTCKH YKH E+G A++WDDAL SMRHF+HK+YNLFTCNCHS+VAN Sbjct: 96 GTGQCCFPPNLTGHTCKHGYKHSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVAN 155 Query: 125 CLNRLCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3 CLNRLCYGG++ WNM++VA LIL KGHW+ S+VRSF PF Sbjct: 156 CLNRLCYGGSMDWNMIDVAVLILFKGHWIDWKSIVRSFLPF 196 >ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera] gi|296081665|emb|CBI20670.3| unnamed protein product [Vitis vinifera] Length = 243 Score = 284 bits (726), Expect = 6e-75 Identities = 126/157 (80%), Positives = 138/157 (87%) Frame = -3 Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294 PCCLVWTPLPVVSWLAPFIGHVGICREDG ILDFAGSNFV+VNDFAFGAVARYL LDRE+ Sbjct: 44 PCCLVWTPLPVVSWLAPFIGHVGICREDGAILDFAGSNFVNVNDFAFGAVARYLQLDREK 103 Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114 CCF PNL+GHTCK+ YKH E+G A++WDDAL S HF HKSYNLFTCNCHS+VANCLNR Sbjct: 104 CCFPPNLAGHTCKNGYKHAENGTAVTWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNR 163 Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3 L YGG++ WNM+NV ALIL KG WV SMS+ RSF PF Sbjct: 164 LAYGGSMGWNMINVCALILFKGRWVDSMSIFRSFSPF 200 >ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] gi|217072464|gb|ACJ84592.1| unknown [Medicago truncatula] gi|355478063|gb|AES59266.1| Transmembrane protein [Medicago truncatula] gi|388520819|gb|AFK48471.1| unknown [Medicago truncatula] Length = 236 Score = 279 bits (713), Expect = 2e-73 Identities = 122/157 (77%), Positives = 136/157 (86%) Frame = -3 Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294 PCCLVW PLPVVSWLAPFIGHVGICREDGT+LDF+GS V+V+DFAFG VARYL+LDR Q Sbjct: 37 PCCLVWNPLPVVSWLAPFIGHVGICREDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQ 96 Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114 CCF PNLSGHTCKH Y+H E+G A++WDDAL S+RHFE K+YNLFTCNCHS+VAN LNR Sbjct: 97 CCFPPNLSGHTCKHGYRHTEYGTAITWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNR 156 Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3 LCYGG++ WNMVNV LIL KGHWV SVVRSF PF Sbjct: 157 LCYGGSMSWNMVNVGILILFKGHWVDFWSVVRSFLPF 193 >ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1| predicted protein [Populus trichocarpa] Length = 235 Score = 278 bits (711), Expect = 3e-73 Identities = 117/157 (74%), Positives = 137/157 (87%) Frame = -3 Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294 PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSN V+V+DF FGA ARYL LDREQ Sbjct: 36 PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQ 95 Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114 CCF PNL+GHTCKH YKH E+G A++WDDAL S R FEHK+YNLFTCNCHS+VA+CLNR Sbjct: 96 CCFPPNLAGHTCKHGYKHSEYGTAITWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNR 155 Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3 CYGG++ WN+++VA LIL KGHW+ S+++SF PF Sbjct: 156 FCYGGSMDWNLIDVAVLILFKGHWIDWKSIIKSFLPF 192