BLASTX nr result

ID: Coptis25_contig00016499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016499
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95981.1| unknown [Populus trichocarpa]                          291   5e-77
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   285   3e-75
ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ...   284   6e-75
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   279   2e-73
ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2...   278   3e-73

>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  291 bits (744), Expect = 5e-77
 Identities = 123/157 (78%), Positives = 141/157 (89%)
 Frame = -3

Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294
           PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSNFV+V+DF+FGA ARY  LDREQ
Sbjct: 44  PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 103

Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114
           CCF PNL+GHTCKH YKH E+G A++WDDAL  SMRHF+HK+YNLFTCNCHS+VANCLNR
Sbjct: 104 CCFPPNLTGHTCKHGYKHSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNR 163

Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3
           LCYGG++ WNM++VA LIL KGHW+   S+VRSF PF
Sbjct: 164 LCYGGSMDWNMIDVAVLILFKGHWIDWKSIVRSFLPF 200


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  285 bits (729), Expect = 3e-75
 Identities = 123/161 (76%), Positives = 141/161 (87%), Gaps = 4/161 (2%)
 Frame = -3

Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294
           PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSNFV+V+DF+FGA ARY  LDREQ
Sbjct: 36  PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQ 95

Query: 293 ----CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVAN 126
               CCF PNL+GHTCKH YKH E+G A++WDDAL  SMRHF+HK+YNLFTCNCHS+VAN
Sbjct: 96  GTGQCCFPPNLTGHTCKHGYKHSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVAN 155

Query: 125 CLNRLCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3
           CLNRLCYGG++ WNM++VA LIL KGHW+   S+VRSF PF
Sbjct: 156 CLNRLCYGGSMDWNMIDVAVLILFKGHWIDWKSIVRSFLPF 196


>ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera]
           gi|296081665|emb|CBI20670.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  284 bits (726), Expect = 6e-75
 Identities = 126/157 (80%), Positives = 138/157 (87%)
 Frame = -3

Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294
           PCCLVWTPLPVVSWLAPFIGHVGICREDG ILDFAGSNFV+VNDFAFGAVARYL LDRE+
Sbjct: 44  PCCLVWTPLPVVSWLAPFIGHVGICREDGAILDFAGSNFVNVNDFAFGAVARYLQLDREK 103

Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114
           CCF PNL+GHTCK+ YKH E+G A++WDDAL  S  HF HKSYNLFTCNCHS+VANCLNR
Sbjct: 104 CCFPPNLAGHTCKNGYKHAENGTAVTWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNR 163

Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3
           L YGG++ WNM+NV ALIL KG WV SMS+ RSF PF
Sbjct: 164 LAYGGSMGWNMINVCALILFKGRWVDSMSIFRSFSPF 200


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  279 bits (713), Expect = 2e-73
 Identities = 122/157 (77%), Positives = 136/157 (86%)
 Frame = -3

Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294
           PCCLVW PLPVVSWLAPFIGHVGICREDGT+LDF+GS  V+V+DFAFG VARYL+LDR Q
Sbjct: 37  PCCLVWNPLPVVSWLAPFIGHVGICREDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQ 96

Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114
           CCF PNLSGHTCKH Y+H E+G A++WDDAL  S+RHFE K+YNLFTCNCHS+VAN LNR
Sbjct: 97  CCFPPNLSGHTCKHGYRHTEYGTAITWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNR 156

Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3
           LCYGG++ WNMVNV  LIL KGHWV   SVVRSF PF
Sbjct: 157 LCYGGSMSWNMVNVGILILFKGHWVDFWSVVRSFLPF 193


>ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  278 bits (711), Expect = 3e-73
 Identities = 117/157 (74%), Positives = 137/157 (87%)
 Frame = -3

Query: 473 PCCLVWTPLPVVSWLAPFIGHVGICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ 294
           PCCL+WTPLPVVSWLAPFIGHVGICREDGTILDF+GSN V+V+DF FGA ARYL LDREQ
Sbjct: 36  PCCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQ 95

Query: 293 CCFSPNLSGHTCKHAYKHMEHGAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNR 114
           CCF PNL+GHTCKH YKH E+G A++WDDAL  S R FEHK+YNLFTCNCHS+VA+CLNR
Sbjct: 96  CCFPPNLAGHTCKHGYKHSEYGTAITWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNR 155

Query: 113 LCYGGNLKWNMVNVAALILSKGHWVGSMSVVRSFFPF 3
            CYGG++ WN+++VA LIL KGHW+   S+++SF PF
Sbjct: 156 FCYGGSMDWNLIDVAVLILFKGHWIDWKSIIKSFLPF 192


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