BLASTX nr result

ID: Coptis25_contig00016497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016497
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS...   101   2e-37
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS...    92   2e-36
ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS...    92   4e-36
ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago ...    94   3e-35
gb|AFK42288.1| unknown [Medicago truncatula]                           94   3e-35

>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
           gi|297735292|emb|CBI17654.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  101 bits (252), Expect(2) = 2e-37
 Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
 Frame = +1

Query: 1   GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINTXXXXXXXXXXXTRP-----PSFRENK 165
           G++RLLVPKSV W+GMSKRFSI+YNGKWLKN++             RP     PS R NK
Sbjct: 126 GLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSSSSTPSSR-NK 184

Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 315
           FCCLSREDVIRF                     ++P+Y+ IEAS PA++V
Sbjct: 185 FCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQV 234



 Score = 80.1 bits (196), Expect(2) = 2e-37
 Identities = 40/66 (60%), Positives = 44/66 (66%)
 Frame = +3

Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
           P DP AVAV+EST DG  KIIGEISA KLWKCDY            GQFV+GVE+N +  
Sbjct: 239 PQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVTSR 298

Query: 549 SLPDFS 566
           SLP FS
Sbjct: 299 SLPHFS 304


>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score = 91.7 bits (226), Expect(2) = 2e-36
 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1   GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPPSFR----ENK 165
           GV+RLLVPKSVAW+GMSKRFS+IY GKWLKN  +             R PS       ++
Sbjct: 125 GVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLNMNRSPSTSITPIRDR 184

Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
           +CCLSREDV+RF                     +N +Y+YIE+S+PA+E
Sbjct: 185 YCCLSREDVLRFIIGCLGALAPLPLTSIASLGAINSNYNYIESSTPAIE 233



 Score = 86.3 bits (212), Expect(2) = 2e-36
 Identities = 43/66 (65%), Positives = 46/66 (69%)
 Frame = +3

Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
           P DP AVAVIESTSDG  KIIGEISA KLWKCDY            GQFV+GVE+N +P 
Sbjct: 239 PQDPSAVAVIESTSDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPR 298

Query: 549 SLPDFS 566
           SLP FS
Sbjct: 299 SLPQFS 304


>ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
          Length = 425

 Score = 92.0 bits (227), Expect(2) = 4e-36
 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +1

Query: 1   GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPPSFR----ENK 165
           GV+RLLVPKS+AW+GMSKRFS+IY GKWLKN  +             R PS       +K
Sbjct: 125 GVKRLLVPKSIAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLSMNRSPSTSVTPIPDK 184

Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
           +CCLSREDV+RF                     +N +Y+YIE+S+PA+E
Sbjct: 185 YCCLSREDVLRFIIGCLGALAPLPLTSIAALEAINSNYNYIESSTPAIE 233



 Score = 85.1 bits (209), Expect(2) = 4e-36
 Identities = 42/66 (63%), Positives = 46/66 (69%)
 Frame = +3

Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
           P DP AVAVIES SDG  KIIGEISA KLWKCDY            GQFV+GVE+N +P 
Sbjct: 239 PQDPSAVAVIESASDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPR 298

Query: 549 SLPDFS 566
           SLP+FS
Sbjct: 299 SLPEFS 304


>ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago truncatula]
           gi|355499156|gb|AES80359.1| hypothetical protein
           MTR_7g079680 [Medicago truncatula]
          Length = 437

 Score = 93.6 bits (231), Expect(2) = 3e-35
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKN---INTXXXXXXXXXXXTRPPSFRENKFC 171
           GV+RLLVPKS+ W+GMSKRFS+IY+GKWLKN    ++               S R+ K+C
Sbjct: 140 GVKRLLVPKSIVWKGMSKRFSVIYHGKWLKNPESPSSSNNNLSVNLNGNTSASIRD-KYC 198

Query: 172 CLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
           CLSREDV+RF                     +NP+Y YIE+S+PALE
Sbjct: 199 CLSREDVLRFIIGCLGALAPIPLTSIAALGAINPNYSYIESSTPALE 245



 Score = 80.5 bits (197), Expect(2) = 3e-35
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = +3

Query: 375 DPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPGSL 554
           DP AVAVIES SDG  KIIGEISA KLWKCDY            GQFV+GVE+N +PGS 
Sbjct: 253 DPSAVAVIESMSDGQCKIIGEISAIKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPGSP 312

Query: 555 PD 560
           PD
Sbjct: 313 PD 314


>gb|AFK42288.1| unknown [Medicago truncatula]
          Length = 422

 Score = 93.6 bits (231), Expect(2) = 3e-35
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = +1

Query: 1   GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKN---INTXXXXXXXXXXXTRPPSFRENKFC 171
           GV+RLLVPKS+ W+GMSKRFS+IY+GKWLKN    ++               S R+ K+C
Sbjct: 125 GVKRLLVPKSIVWKGMSKRFSVIYHGKWLKNPESPSSSNNNLSVNLNGNTSASIRD-KYC 183

Query: 172 CLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
           CLSREDV+RF                     +NP+Y YIE+S+PALE
Sbjct: 184 CLSREDVLRFIIGCLGALAPIPLTSIAALGAINPNYSYIESSTPALE 230



 Score = 80.5 bits (197), Expect(2) = 3e-35
 Identities = 40/62 (64%), Positives = 43/62 (69%)
 Frame = +3

Query: 375 DPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPGSL 554
           DP AVAVIES SDG  KIIGEISA KLWKCDY            GQFV+GVE+N +PGS 
Sbjct: 238 DPSAVAVIESMSDGQCKIIGEISAIKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPGSP 297

Query: 555 PD 560
           PD
Sbjct: 298 PD 299


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