BLASTX nr result
ID: Coptis25_contig00016497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016497
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBS... 101 2e-37
ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBS... 92 2e-36
ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBS... 92 4e-36
ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago ... 94 3e-35
gb|AFK42288.1| unknown [Medicago truncatula] 94 3e-35
>ref|XP_002279210.1| PREDICTED: CBS domain-containing protein CBSX6 [Vitis vinifera]
gi|297735292|emb|CBI17654.3| unnamed protein product
[Vitis vinifera]
Length = 427
Score = 101 bits (252), Expect(2) = 2e-37
Identities = 54/110 (49%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Frame = +1
Query: 1 GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINTXXXXXXXXXXXTRP-----PSFRENK 165
G++RLLVPKSV W+GMSKRFSI+YNGKWLKN++ RP PS R NK
Sbjct: 126 GLKRLLVPKSVVWKGMSKRFSILYNGKWLKNLDASSSSTNLAPNANRPSSSSTPSSR-NK 184
Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALEV 315
FCCLSREDVIRF ++P+Y+ IEAS PA++V
Sbjct: 185 FCCLSREDVIRFVIGCLGALAPLPLSSISSLGAISPNYYSIEASFPAIQV 234
Score = 80.1 bits (196), Expect(2) = 2e-37
Identities = 40/66 (60%), Positives = 44/66 (66%)
Frame = +3
Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
P DP AVAV+EST DG KIIGEISA KLWKCDY GQFV+GVE+N +
Sbjct: 239 PQDPSAVAVVESTPDGQYKIIGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVTSR 298
Query: 549 SLPDFS 566
SLP FS
Sbjct: 299 SLPHFS 304
>ref|XP_003534522.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
Length = 425
Score = 91.7 bits (226), Expect(2) = 2e-36
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +1
Query: 1 GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPPSFR----ENK 165
GV+RLLVPKSVAW+GMSKRFS+IY GKWLKN + R PS ++
Sbjct: 125 GVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLNMNRSPSTSITPIRDR 184
Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
+CCLSREDV+RF +N +Y+YIE+S+PA+E
Sbjct: 185 YCCLSREDVLRFIIGCLGALAPLPLTSIASLGAINSNYNYIESSTPAIE 233
Score = 86.3 bits (212), Expect(2) = 2e-36
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +3
Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
P DP AVAVIESTSDG KIIGEISA KLWKCDY GQFV+GVE+N +P
Sbjct: 239 PQDPSAVAVIESTSDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPR 298
Query: 549 SLPDFS 566
SLP FS
Sbjct: 299 SLPQFS 304
>ref|XP_003552437.1| PREDICTED: CBS domain-containing protein CBSX6-like [Glycine max]
Length = 425
Score = 92.0 bits (227), Expect(2) = 4e-36
Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +1
Query: 1 GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKNINT-XXXXXXXXXXXTRPPSFR----ENK 165
GV+RLLVPKS+AW+GMSKRFS+IY GKWLKN + R PS +K
Sbjct: 125 GVKRLLVPKSIAWKGMSKRFSVIYYGKWLKNSESPGNSSNNLPLSMNRSPSTSVTPIPDK 184
Query: 166 FCCLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
+CCLSREDV+RF +N +Y+YIE+S+PA+E
Sbjct: 185 YCCLSREDVLRFIIGCLGALAPLPLTSIAALEAINSNYNYIESSTPAIE 233
Score = 85.1 bits (209), Expect(2) = 4e-36
Identities = 42/66 (63%), Positives = 46/66 (69%)
Frame = +3
Query: 369 PLDPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPG 548
P DP AVAVIES SDG KIIGEISA KLWKCDY GQFV+GVE+N +P
Sbjct: 239 PQDPSAVAVIESASDGQCKIIGEISACKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPR 298
Query: 549 SLPDFS 566
SLP+FS
Sbjct: 299 SLPEFS 304
>ref|XP_003624141.1| hypothetical protein MTR_7g079680 [Medicago truncatula]
gi|355499156|gb|AES80359.1| hypothetical protein
MTR_7g079680 [Medicago truncatula]
Length = 437
Score = 93.6 bits (231), Expect(2) = 3e-35
Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +1
Query: 1 GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKN---INTXXXXXXXXXXXTRPPSFRENKFC 171
GV+RLLVPKS+ W+GMSKRFS+IY+GKWLKN ++ S R+ K+C
Sbjct: 140 GVKRLLVPKSIVWKGMSKRFSVIYHGKWLKNPESPSSSNNNLSVNLNGNTSASIRD-KYC 198
Query: 172 CLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
CLSREDV+RF +NP+Y YIE+S+PALE
Sbjct: 199 CLSREDVLRFIIGCLGALAPIPLTSIAALGAINPNYSYIESSTPALE 245
Score = 80.5 bits (197), Expect(2) = 3e-35
Identities = 40/62 (64%), Positives = 43/62 (69%)
Frame = +3
Query: 375 DPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPGSL 554
DP AVAVIES SDG KIIGEISA KLWKCDY GQFV+GVE+N +PGS
Sbjct: 253 DPSAVAVIESMSDGQCKIIGEISAIKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPGSP 312
Query: 555 PD 560
PD
Sbjct: 313 PD 314
>gb|AFK42288.1| unknown [Medicago truncatula]
Length = 422
Score = 93.6 bits (231), Expect(2) = 3e-35
Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +1
Query: 1 GVRRLLVPKSVAWRGMSKRFSIIYNGKWLKN---INTXXXXXXXXXXXTRPPSFRENKFC 171
GV+RLLVPKS+ W+GMSKRFS+IY+GKWLKN ++ S R+ K+C
Sbjct: 125 GVKRLLVPKSIVWKGMSKRFSVIYHGKWLKNPESPSSSNNNLSVNLNGNTSASIRD-KYC 183
Query: 172 CLSREDVIRFXXXXXXXXXXXXXXXXXXXNVVNPHYHYIEASSPALE 312
CLSREDV+RF +NP+Y YIE+S+PALE
Sbjct: 184 CLSREDVLRFIIGCLGALAPIPLTSIAALGAINPNYSYIESSTPALE 230
Score = 80.5 bits (197), Expect(2) = 3e-35
Identities = 40/62 (64%), Positives = 43/62 (69%)
Frame = +3
Query: 375 DPGAVAVIESTSDGLSKIIGEISASKLWKCDYXXXXXXXXXXXXGQFVLGVEENTSPGSL 554
DP AVAVIES SDG KIIGEISA KLWKCDY GQFV+GVE+N +PGS
Sbjct: 238 DPSAVAVIESMSDGQCKIIGEISAIKLWKCDYLSAAWALANLSAGQFVMGVEDNVTPGSP 297
Query: 555 PD 560
PD
Sbjct: 298 PD 299