BLASTX nr result
ID: Coptis25_contig00016468
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016468 (601 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206... 59 2e-14 ref|XP_002517838.1| conserved hypothetical protein [Ricinus comm... 49 3e-11 gb|ABK94808.1| unknown [Populus trichocarpa] 47 4e-10 ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|2... 47 2e-09 gb|AFK47666.1| unknown [Medicago truncatula] 47 1e-08 >ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206223 [Cucumis sativus] gi|449508868|ref|XP_004163431.1| PREDICTED: uncharacterized protein LOC101231399 [Cucumis sativus] Length = 229 Score = 58.5 bits (140), Expect(2) = 2e-14 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 10/73 (13%) Frame = +3 Query: 291 EREKEVVP----VFKPEAFVPPHLRPGFVGKEEKLVG------QNGQRNIGPVNSSNTDN 440 E+++E+ P + KPE FVPPHLR GFVGKEE+ V + QR G SS Sbjct: 130 EKDREITPPVVTLHKPEKFVPPHLRAGFVGKEERPVNVGIRSREGNQRQYGNYGSSGR-- 187 Query: 441 NNGYDENGRPKSG 479 Y E+GRPKSG Sbjct: 188 ---YGEDGRPKSG 197 Score = 45.4 bits (106), Expect(2) = 2e-14 Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 26/84 (30%) Frame = +1 Query: 4 SNNNKKQPASSSSTTSL--------RNHDGMLVLTRPSPKPI---QPQHPKTQ----PIE 138 SN N +SSS T+ ++H MLVLTRP+P+PI QP P+ Q + Sbjct: 32 SNKNPSSSSSSSFATATYSSISSPNKSHGRMLVLTRPTPRPITSPQPLSPQPQSRPSSAD 91 Query: 139 HKP-----------ESISLRPLGR 177 H+P +SISLRPLGR Sbjct: 92 HRPVPDHPRPQSDSDSISLRPLGR 115 >ref|XP_002517838.1| conserved hypothetical protein [Ricinus communis] gi|223542820|gb|EEF44356.1| conserved hypothetical protein [Ricinus communis] Length = 231 Score = 48.9 bits (115), Expect(2) = 3e-11 Identities = 39/95 (41%), Positives = 46/95 (48%), Gaps = 19/95 (20%) Frame = +1 Query: 4 SNNNKKQPASSSSTTSLRNHDGMLVLTRPSPKPI-----------QPQHPKTQPIE---- 138 S N K SSSS++S R+H MLVLTRP+PKPI PQ TQ + Sbjct: 46 SPNTYKNHLSSSSSSSSRSHGRMLVLTRPTPKPISNIATTPPLSPSPQIKSTQSPDIQDQ 105 Query: 139 --HKPES--ISLRPLGRXXXXXXXXXXXQEREKEV 231 +P+S ISLRP GR Q EKEV Sbjct: 106 DRSEPDSNLISLRPSGRTGSSLCVSAQIQIPEKEV 140 Score = 44.7 bits (104), Expect(2) = 3e-11 Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 7/56 (12%) Frame = +3 Query: 333 FVPPHLRPGFVGKEEK-----LVGQNGQRNIGPVNSSNTDNNN--GYDENGRPKSG 479 FVPPHLRPGFVG+EE+ + G++ P S + + Y E+GRPKSG Sbjct: 145 FVPPHLRPGFVGREERPGPEVVRGKDAAHRQQPQGYSGYGSGSPVQYGEDGRPKSG 200 >gb|ABK94808.1| unknown [Populus trichocarpa] Length = 238 Score = 47.0 bits (110), Expect(2) = 4e-10 Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 12/75 (16%) Frame = +3 Query: 291 EREKEV---VPVFKPEAFVPPHLRPGFVGKEE---------KLVGQNGQRNIGPVNSSNT 434 E++KEV V K + FVPPHLRPGFVG+EE K VGQ Q+ Sbjct: 141 EKQKEVGSSVGSPKSDKFVPPHLRPGFVGREEKPGPEVFRGKEVGQRQQQQF-------F 193 Query: 435 DNNNGYDENGRPKSG 479 + + + E GRPKSG Sbjct: 194 GSPDRFGEEGRPKSG 208 Score = 42.7 bits (99), Expect(2) = 4e-10 Identities = 40/97 (41%), Positives = 44/97 (45%), Gaps = 22/97 (22%) Frame = +1 Query: 7 NNNKKQPASSSSTTSLRNHDGMLVLTRPSPKPIQ-------PQHPKTQP----------- 132 NN K SSST R H MLVLTR +PKPI PKT P Sbjct: 53 NNLYKSHLPSSST---RTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQ 109 Query: 133 IEHKPES--ISLRPLGR--XXXXXXXXXXXQEREKEV 231 E +PES ISLRPLGR QE++KEV Sbjct: 110 TEAEPESDRISLRPLGRTGAGSIASSPVHGQEKQKEV 146 >ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|222835679|gb|EEE74114.1| predicted protein [Populus trichocarpa] Length = 177 Score = 47.0 bits (110), Expect(2) = 2e-09 Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 12/75 (16%) Frame = +3 Query: 291 EREKEV---VPVFKPEAFVPPHLRPGFVGKEE---------KLVGQNGQRNIGPVNSSNT 434 E++KEV V K + FVPPHLRPGFVG+EE K VGQ Q+ Sbjct: 80 EKQKEVGSSVGSPKSDKFVPPHLRPGFVGREEKPGPEVFRGKEVGQRQQQQF-------F 132 Query: 435 DNNNGYDENGRPKSG 479 + + + E GRPKSG Sbjct: 133 GSPDRFGEEGRPKSG 147 Score = 40.4 bits (93), Expect(2) = 2e-09 Identities = 34/85 (40%), Positives = 40/85 (47%), Gaps = 22/85 (25%) Frame = +1 Query: 43 TTSLRNHDGMLVLTRPSPKPIQ-------PQHPKTQP-----------IEHKPES--ISL 162 ++S R H MLVLTR +PKPI PKT P E +PES ISL Sbjct: 1 SSSTRTHGRMLVLTRTTPKPIPSIQTPPLTPSPKTPPAHQAQVQIPVQTEAEPESDRISL 60 Query: 163 RPLGR--XXXXXXXXXXXQEREKEV 231 RPLGR QE++KEV Sbjct: 61 RPLGRTGAGSIASSPVHGQEKQKEV 85 >gb|AFK47666.1| unknown [Medicago truncatula] Length = 188 Score = 47.4 bits (111), Expect(2) = 1e-08 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 28/87 (32%) Frame = +1 Query: 1 KSNNNKKQPASSSSTT----------SLRNHDGMLVLTRPSPKPI-------QPQHPKTQ 129 K+NN K P+ SSS++ + H +LVLTRP+PKPI Q Q K Sbjct: 25 KTNNASKNPSLSSSSSFSSASYSAVSAPNKHGRILVLTRPTPKPISHPTPPAQSQQSKPN 84 Query: 130 PIEHK-----------PESISLRPLGR 177 PI+ P+SISLRPLGR Sbjct: 85 PIQAPVSSDRPRSQPGPDSISLRPLGR 111 Score = 37.4 bits (85), Expect(2) = 1e-08 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = +3 Query: 297 EKEVVPVFKPEAFVPPHLRPGFVGKEEKL-----VGQNGQRNIGPVNSSNTDNNNGYDEN 461 EKE K FVPPHLRPGFV +EE L G + V+ S+T N + + Sbjct: 128 EKEKSLPVKSGKFVPPHLRPGFVPREECLRENLRPKSGGNERMRKVSGSDTGFGNRPNSS 187 Query: 462 G 464 G Sbjct: 188 G 188