BLASTX nr result

ID: Coptis25_contig00016464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016464
         (1312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255...   298   1e-98
ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220...   290   4e-94
ref|XP_003600978.1| hypothetical protein MTR_3g071640 [Medicago ...   289   3e-90
ref|XP_002311247.1| predicted protein [Populus trichocarpa] gi|2...   264   6e-86
ref|XP_002879864.1| hypothetical protein ARALYDRAFT_903321 [Arab...   268   6e-84

>ref|XP_002273745.2| PREDICTED: uncharacterized protein LOC100255420 [Vitis vinifera]
           gi|297736551|emb|CBI25422.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  298 bits (762), Expect(2) = 1e-98
 Identities = 138/206 (66%), Positives = 159/206 (77%)
 Frame = +2

Query: 266 QLCDGLIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLID 445
           QLCDG+IFNHDPP C DC DCGGPS CGM CSALVAN + GY+VCTTIGR+SS  +NLID
Sbjct: 74  QLCDGMIFNHDPPTCADCWDCGGPSRCGMDCSALVANNVKGYHVCTTIGRASSVDINLID 133

Query: 446 EKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCAK 625
           +  P  GV VK+SS+G   NCSLSVSV C+SNG+QGP  LE  GTCDYAT +RHPSGCA+
Sbjct: 134 KNIPKKGVTVKMSSNGPDVNCSLSVSVICESNGVQGPYSLEQSGTCDYATEMRHPSGCAE 193

Query: 626 TVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSLPHRIQ 805
            VS+HG GLGWFST LII+ CF   YLL GT YR+F LG+RGV  IP+L  W SLP R Q
Sbjct: 194 IVSVHGRGLGWFSTFLIILFCFLGVYLLVGTVYRFFFLGVRGVDIIPNLGFWTSLPQRTQ 253

Query: 806 GLFRSLIRRFRRPTQGHRSTYSPVNF 883
               SL+R+FR P+QGHR +YS VNF
Sbjct: 254 SSCASLVRKFRGPSQGHRDSYSAVNF 279



 Score = 90.1 bits (222), Expect(2) = 1e-98
 Identities = 45/75 (60%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = +3

Query: 39  MAIRDDYIKWVILITILYRVG--TTNSVCELSVSHGDKLYNFSLASPTWKYPHGVLSEDG 212
           M I  D  +WV+++TIL+RV   + + VC LSV     LY FSLASPT K+PHGVLSEDG
Sbjct: 1   MRIGGDLPRWVLILTILHRVSLFSASDVCRLSVLDRYNLYTFSLASPTSKFPHGVLSEDG 60

Query: 213 FYKIARNGTVLWFQV 257
           FYK+A N TVLWFQ+
Sbjct: 61  FYKVAVNETVLWFQL 75


>ref|XP_004148171.1| PREDICTED: uncharacterized protein LOC101220308 [Cucumis sativus]
          Length = 281

 Score =  290 bits (743), Expect(2) = 4e-94
 Identities = 131/206 (63%), Positives = 156/206 (75%)
 Frame = +2

Query: 266 QLCDGLIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLID 445
           QLCDG+IFNHDPP C DC  CGGPSHCGMGC ALVAN + GY VCTTIG   +T +++ID
Sbjct: 76  QLCDGMIFNHDPPMCIDCLGCGGPSHCGMGCGALVANKIEGYDVCTTIGLVQNTNISIID 135

Query: 446 EKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCAK 625
            KNP  GV VK+S+      CSLSVSV C ++G+QGP +LE +G CDYAT LRHPSGCAK
Sbjct: 136 IKNPDRGVAVKMSNIDTKVKCSLSVSVICTTDGIQGPQILEKIGPCDYATSLRHPSGCAK 195

Query: 626 TVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSLPHRIQ 805
            V +H  G G+F T  II+LC F  YLLAG  YRYF L +RGV  IP+LE WLSLPH+IQ
Sbjct: 196 IVHVHRRGWGFFGTFTIIILCLFGGYLLAGIVYRYFVLKVRGVDVIPNLEFWLSLPHKIQ 255

Query: 806 GLFRSLIRRFRRPTQGHRSTYSPVNF 883
            LF SL+R+F+ P++GHR +YSPVNF
Sbjct: 256 SLFASLVRKFKGPSRGHRDSYSPVNF 281



 Score = 82.4 bits (202), Expect(2) = 4e-94
 Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
 Frame = +3

Query: 39  MAIRDDYIKWV-ILITILYRVGTTNS---VCELSVSHGDKLYNFSLASPTWKYPHGVLSE 206
           M  R  ++KWV     IL+++   NS   +CE S+ +  K+YNF+LASPT K+PHGVLSE
Sbjct: 1   MMRRIHFVKWVTFFFVILHQILPFNSAFSICEYSLVNNGKMYNFNLASPTSKFPHGVLSE 60

Query: 207 DGFYKIARNGTVLWFQV 257
           DGFY++A N TV+WFQ+
Sbjct: 61  DGFYRVAVNNTVVWFQL 77


>ref|XP_003600978.1| hypothetical protein MTR_3g071640 [Medicago truncatula]
           gi|355490026|gb|AES71229.1| hypothetical protein
           MTR_3g071640 [Medicago truncatula]
          Length = 284

 Score =  289 bits (740), Expect(2) = 3e-90
 Identities = 129/206 (62%), Positives = 158/206 (76%)
 Frame = +2

Query: 266 QLCDGLIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLID 445
           QLCDG+IFNHDPP C DC DCGGP+ CGM C ALV+N +GGY+VC  IGR     +++ID
Sbjct: 79  QLCDGMIFNHDPPTCADCWDCGGPTRCGMECGALVSNNIGGYHVCAAIGRGPKIDIDVID 138

Query: 446 EKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCAK 625
           +KNP +GV VK+SSS +  NCSL+VSV C+ NG+QGP  LE  G C+YAT L+HPSGCA 
Sbjct: 139 KKNPHVGVTVKMSSSSLKYNCSLAVSVLCNVNGVQGPQTLERSGDCNYATELKHPSGCAM 198

Query: 626 TVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSLPHRIQ 805
            V +HG+G GWF TLL+IVLC F AYLLAG  YRYF L IRG   IP+L++W SLP R Q
Sbjct: 199 IVHVHGSGWGWFGTLLVIVLCLFAAYLLAGIVYRYFFLKIRGTEVIPNLDLWTSLPRRTQ 258

Query: 806 GLFRSLIRRFRRPTQGHRSTYSPVNF 883
            L  S++R+F+ P++GHRSTYSPVNF
Sbjct: 259 SLCSSVVRKFKGPSEGHRSTYSPVNF 284



 Score = 70.5 bits (171), Expect(2) = 3e-90
 Identities = 30/63 (47%), Positives = 43/63 (68%)
 Frame = +3

Query: 69  VILITILYRVGTTNSVCELSVSHGDKLYNFSLASPTWKYPHGVLSEDGFYKIARNGTVLW 248
           V L++      T  + C+ S   G+KLYN++L+SP   +PHG+LSEDGFYK++ N T LW
Sbjct: 18  VFLLSSSLSSATPTTACKFSFRDGNKLYNYTLSSPIRNFPHGILSEDGFYKVSVNQTTLW 77

Query: 249 FQV 257
           FQ+
Sbjct: 78  FQL 80


>ref|XP_002311247.1| predicted protein [Populus trichocarpa] gi|222851067|gb|EEE88614.1|
           predicted protein [Populus trichocarpa]
          Length = 354

 Score =  264 bits (674), Expect(2) = 6e-86
 Identities = 129/251 (51%), Positives = 158/251 (62%), Gaps = 44/251 (17%)
 Frame = +2

Query: 263 HQLCDGLIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLI 442
           + LCDG+IFNHDPPRC +C DCGG S CGM CSAL+A  + GY VCTTIG+ +ST  N+I
Sbjct: 105 YHLCDGMIFNHDPPRCVECLDCGGASRCGMECSALMARNIEGYDVCTTIGKVTSTSTNII 164

Query: 443 DEKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCA 622
           D +NP  GV+VK++SSG   NCSLSVSV CDSN + GP+ LE +GTCDYA VL+HPSGCA
Sbjct: 165 DNQNPHKGVIVKMTSSGSKHNCSLSVSVICDSNRVHGPHSLEKLGTCDYAAVLQHPSGCA 224

Query: 623 KTVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVH--------------- 757
            T++ HG G GWF TL+IIV C F  Y LAG  YR+F +G+ G+                
Sbjct: 225 -TINGHGKGWGWFGTLMIIVFCLFGGYFLAGAVYRHFYIGVHGLDQYCPVSNFIPVKQLI 283

Query: 758 -----------------------------AIPHLEVWLSLPHRIQGLFRSLIRRFRRPTQ 850
                                         IP+L+ W  LPHR Q  F SL+RRFR PT+
Sbjct: 284 RWFKSSDFRDRHCLCCGIRVPDCGLIRDLMIPNLDFWTRLPHRTQSFFASLVRRFRGPTE 343

Query: 851 GHRSTYSPVNF 883
           G+RS+YSPVNF
Sbjct: 344 GYRSSYSPVNF 354



 Score = 81.6 bits (200), Expect(2) = 6e-86
 Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = +3

Query: 66  WVILITILYRVGT---TNSVCELSVSHGDKLYNFSLASPTWKYPHGVLSEDGFYKIARNG 236
           + ++I IL+RVG+    ++VCELS    DK+Y+F+L SP   +PHGVLSEDGFYK A N 
Sbjct: 14  YFLIIAILHRVGSLDPVSAVCELSFVVRDKVYSFNLVSPLPNFPHGVLSEDGFYKAAVNE 73

Query: 237 TVLWFQVGFI 266
           TVLWFQVG I
Sbjct: 74  TVLWFQVGSI 83


>ref|XP_002879864.1| hypothetical protein ARALYDRAFT_903321 [Arabidopsis lyrata subsp.
           lyrata] gi|297325703|gb|EFH56123.1| hypothetical protein
           ARALYDRAFT_903321 [Arabidopsis lyrata subsp. lyrata]
          Length = 276

 Score =  268 bits (686), Expect(2) = 6e-84
 Identities = 123/206 (59%), Positives = 151/206 (73%)
 Frame = +2

Query: 266 QLCDGLIFNHDPPRCFDCQDCGGPSHCGMGCSALVANPLGGYYVCTTIGRSSSTKVNLID 445
           QLCD LIFNHDPPRC  C+DCGGPSHCG  CSALV+  + GY VCT++G +SSTKV++ID
Sbjct: 71  QLCDVLIFNHDPPRCVGCEDCGGPSHCGTSCSALVSENVRGYDVCTSLGHASSTKVDIID 130

Query: 446 EKNPSMGVVVKISSSGVLTNCSLSVSVFCDSNGLQGPNLLETVGTCDYATVLRHPSGCAK 625
           +++P  GV+VK+S      NCSLSVSV C  N + GP  L   GTC YAT LRHPSGCA 
Sbjct: 131 KEDPGKGVIVKMSGGDRNQNCSLSVSVICQKNKVDGPLTLAKSGTCHYATQLRHPSGCAA 190

Query: 626 TVSLHGNGLGWFSTLLIIVLCFFVAYLLAGTAYRYFSLGIRGVHAIPHLEVWLSLPHRIQ 805
            +S H +G GWFSTLLII+LC F AYLL G  YRYFSLGIRG+  IP+++ W ++PH +Q
Sbjct: 191 AISGHSSGWGWFSTLLIIILCLFGAYLLGGAVYRYFSLGIRGIDVIPNVDYWATVPHSVQ 250

Query: 806 GLFRSLIRRFRRPTQGHRSTYSPVNF 883
             F SL  RF   ++G R++YS VNF
Sbjct: 251 SCFGSLFSRFGGSSRGQRTSYSQVNF 276



 Score = 70.5 bits (171), Expect(2) = 6e-84
 Identities = 33/67 (49%), Positives = 46/67 (68%)
 Frame = +3

Query: 57  YIKWVILITILYRVGTTNSVCELSVSHGDKLYNFSLASPTWKYPHGVLSEDGFYKIARNG 236
           +I   ILIT++      NS CE S +  +K+++F+LAS    +PHGVLSEDGFY++  N 
Sbjct: 6   WIPRFILITLVLSSFRVNSQCEFSFTGRNKVFDFNLASSIRNFPHGVLSEDGFYRVEANS 65

Query: 237 TVLWFQV 257
           TVLWFQ+
Sbjct: 66  TVLWFQL 72


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