BLASTX nr result

ID: Coptis25_contig00016455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016455
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein ...   157   1e-36
emb|CBI19065.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_002513766.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|XP_003614789.1| Growth regulator-related protein [Medicago t...   117   1e-24
ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein ...   112   3e-23

>ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 585

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/135 (57%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
 Frame = -1

Query: 391 HSYRRLRSKSFKGTTKTSFLANILLRKKFRLFLIIPLFYISVLFTCLGAFFPIMNPSPLP 212
           H  R LRSK+F  + + S +A I++R+  R FL++PLFYIS L  C+G F  ++  +PLP
Sbjct: 37  HCRRLLRSKTFSQSRRESSVAGIIIRRGLRYFLLLPLFYISGLLMCVGPFSGLVWQAPLP 96

Query: 211 GSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCANTTGKHSGFS-----E 47
           GSVYRS E+F+KLW +I+SDN+SA+E+SSVWRYNRRL EQ+PC NT+ +H   +     +
Sbjct: 97  GSVYRSHEIFEKLWHEIESDNSSAIELSSVWRYNRRLKEQKPCPNTSYRHHFATKRESPD 156

Query: 46  PSGYLIVEANGGLNQ 2
           PSGYLIVEANGGLNQ
Sbjct: 157 PSGYLIVEANGGLNQ 171


>emb|CBI19065.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  157 bits (397), Expect = 1e-36
 Identities = 77/135 (57%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
 Frame = -1

Query: 391 HSYRRLRSKSFKGTTKTSFLANILLRKKFRLFLIIPLFYISVLFTCLGAFFPIMNPSPLP 212
           H  R LRSK+F  + + S +A I++R+  R FL++PLFYIS L  C+G F  ++  +PLP
Sbjct: 37  HCRRLLRSKTFSQSRRESSVAGIIIRRGLRYFLLLPLFYISGLLMCVGPFSGLVWQAPLP 96

Query: 211 GSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCANTTGKHSGFS-----E 47
           GSVYRS E+F+KLW +I+SDN+SA+E+SSVWRYNRRL EQ+PC NT+ +H   +     +
Sbjct: 97  GSVYRSHEIFEKLWHEIESDNSSAIELSSVWRYNRRLKEQKPCPNTSYRHHFATKRESPD 156

Query: 46  PSGYLIVEANGGLNQ 2
           PSGYLIVEANGGLNQ
Sbjct: 157 PSGYLIVEANGGLNQ 171


>ref|XP_002513766.1| conserved hypothetical protein [Ricinus communis]
           gi|223546852|gb|EEF48349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 591

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 6/133 (4%)
 Frame = -1

Query: 382 RRLRSKSFKGTTKTSFL-ANILLRKKFRLFLIIPLFYISVLFTCLGAFFPIMNPSPLPGS 206
           RRLRSK  +   +   L A I LR   R  L++PL YIS L  C+G F  ++ PS LPG+
Sbjct: 48  RRLRSKVDQSHFRRENLSAGIFLRWNIRYLLVLPLLYISGLIMCVGPFSALLQPS-LPGA 106

Query: 205 VYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCANTTGKHSGFSE-----PS 41
           VYRS ++F KLWP I +DN++++E+SSVW++ RR   Q+PC N+T + S  +      PS
Sbjct: 107 VYRSHDLFLKLWPHISADNSTSIELSSVWKFKRRSKLQRPCPNSTARQSLAANEVSTGPS 166

Query: 40  GYLIVEANGGLNQ 2
           GYLIVEANGGLNQ
Sbjct: 167 GYLIVEANGGLNQ 179


>ref|XP_003614789.1| Growth regulator-related protein [Medicago truncatula]
           gi|355516124|gb|AES97747.1| Growth regulator-related
           protein [Medicago truncatula]
          Length = 589

 Score =  117 bits (293), Expect = 1e-24
 Identities = 62/119 (52%), Positives = 81/119 (68%), Gaps = 6/119 (5%)
 Frame = -1

Query: 340 SFLANILLRKKFRLFLIIPLFYISVLFTCLGAFFPI---MNPSPLPGSVYRSPEVFDKLW 170
           S  A I+ R   R F ++P+ Y+S L  C+G F P    +  +PLPGS YRS EVFD LW
Sbjct: 54  SLSAGIMTRWSLRYFFLLPVVYLSGLLMCVGPF-PFTFFIGHTPLPGSRYRSHEVFDHLW 112

Query: 169 PQIQSDNASALEMSSVWRYNRRLLEQQPCANTTG-KHSGFSEP--SGYLIVEANGGLNQ 2
           P+I SDN+S +E+SSVW+Y R+L E++PC+N T   H  F  P  +G+LIVEANGGLNQ
Sbjct: 113 PEIDSDNSSFIELSSVWKYKRKLREKKPCSNLTDLHHEHFVSPGLNGFLIVEANGGLNQ 171


>ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 592

 Score =  112 bits (281), Expect = 3e-23
 Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 11/138 (7%)
 Frame = -1

Query: 382 RRLRSKSFKGTTKTSFLANILLRKKFRLFLIIPLFYISVLFTCLGAFFPIMNPSPLPGSV 203
           RR+R +     ++   +A I+ R+  R F ++PL YIS L  C+G F  ++  + LPGS 
Sbjct: 44  RRVRPEKNSSESRR-LVAGIMARRSLRFFFLLPLVYISGLLMCVGPFSALIGHTLLPGSR 102

Query: 202 YRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCANTTGKH-SGFSEP------ 44
           YRS E+F  LW  I+ DN+SA E++SVW+Y R+L EQ+PC N T  H   F +       
Sbjct: 103 YRSHEIFHNLWHDIEGDNSSATELASVWKYKRKLREQKPCPNLTALHREHFGKRLDTLPM 162

Query: 43  ----SGYLIVEANGGLNQ 2
               +G+LIVEANGGLNQ
Sbjct: 163 SPGLNGFLIVEANGGLNQ 180


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