BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016448
         (1871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26396.3| unnamed protein product [Vitis vinifera]              488   e-135
ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containi...   461   e-127
ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containi...   409   e-111
ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|2...   351   4e-94
ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containi...   346   1e-92

>emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  488 bits (1256), Expect = e-135
 Identities = 231/408 (56%), Positives = 305/408 (74%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVN 1045
            G SIH Y  KLG    L L+NSI++MY+  +QI  A S+F  +  KS V+WT ++GGY++
Sbjct: 144  GLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLS 203

Query: 1044 LGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNSV 865
             G V + F +FNQMR   +  DS+VF+NL+SCC   G L LA  VH+L+LK+G  H + +
Sbjct: 204  AGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPI 263

Query: 864  QNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTST 685
             N LV MY KC DLVSARR+F  V +KS  LWTS+ISGYAQ G P+EA++LF  + RT++
Sbjct: 264  DNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTAS 323

Query: 684  RPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAKG 505
            RPNE+TLATV+SACA+           +Y  LNGL SDLR+QTSLIHM+CKCGS ++A+ 
Sbjct: 324  RPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQA 383

Query: 504  IFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSHSG 325
            +F+    +DLA+WS+MINGYA+HGMG+EAL LFH +Q   G +PDA+VY  VL ACSHSG
Sbjct: 384  LFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSG 443

Query: 324  LVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWVPL 145
            L+EDGLK+F+ MQ+++GI+PS +HYS LVDLLGRAGY++LAL+ IQ MPV  Q +VW P 
Sbjct: 444  LIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPF 503

Query: 144  LSACRTHRNIQLGELVAKRLFDVAPQNTNNYILMSNMYASVGKWKQAA 1
            LSAC TH N++LGE  AK LFD+ P++T N++LM+N+Y S+GKWK+AA
Sbjct: 504  LSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAA 551



 Score =  147 bits (372), Expect = 7e-33
 Identities = 94/364 (25%), Positives = 167/364 (45%)
 Frame = -3

Query: 1215 IHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVNLGH 1036
            +H + +  GF + + +  +++ +Y      H+AR +F+ M  KS V+W ++I  +    H
Sbjct: 50   LHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFH 109

Query: 1035 VHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNSVQNS 856
            + Q+F +  QM+L  L L S  F   ++ C+    L    S+H  I K G   H  + NS
Sbjct: 110  IDQSFGILKQMQLLGLELSSATFTGFLASCS----LPQGLSIHGYITKLGLDLHLPLANS 165

Query: 855  LVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTSTRPN 676
            +++MY +   +  A  +F+ +  KS + WT ++ GY   G+ ++   +F  M      P+
Sbjct: 166  IMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPD 225

Query: 675  EITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAKGIFD 496
             I    +IS C                  +G      I   L+ MY KC     A+ +FD
Sbjct: 226  SIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFD 285

Query: 495  SASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSHSGLVE 316
            +   + + +W+SMI+GYA  G   EAL LF+ L      RP+ +    VLSAC+  G + 
Sbjct: 286  AVHEKSVFLWTSMISGYAQFGYPNEALHLFNML-LRTASRPNELTLATVLSACAEMGSLR 344

Query: 315  DGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWVPLLSA 136
             G +  Q +    G+       ++L+ +  + G +  A  + + +P      VW  +++ 
Sbjct: 345  MGEEIEQYILLN-GLGSDLRVQTSLIHMFCKCGSIKKAQALFERIP-NKDLAVWSAMING 402

Query: 135  CRTH 124
               H
Sbjct: 403  YAVH 406



 Score =  113 bits (283), Expect = 2e-22
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = -1

Query: 1700 SGLRGDNFTFPSVLKCCAKLRSLRDGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCG 1521
            SG+ G  FTFP VLK CAKL SL D  K+H+H LLTGF  H+FVQTAL+D+YSKC C   
Sbjct: 22   SGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCC--- 78

Query: 1520 GVSASRLLFDEMPLPSLVSWNSILSAY 1440
               ++RL+FD+MP+ SLVSWNSI+SA+
Sbjct: 79   -FHSARLVFDQMPIKSLVSWNSIISAH 104



 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 54/212 (25%), Positives = 103/212 (48%)
 Frame = -3

Query: 960 LVSCCARIGRLSLASSVHALILKTGCHHHNSVQNSLVNMYPKCGDLVSARRIFHLVKDKS 781
           ++  CA++  L  A+ +H+ IL TG   H  VQ +LV++Y KC    SAR +F  +  KS
Sbjct: 34  VLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVFDQMPIKS 93

Query: 780 TLLWTSLISGYAQLGNPSEAVNLFKHMTRTSTRPNEITLATVISACADXXXXXXXXXXXE 601
            + W S+IS + +  +  ++  + K M       +  T    +++C+             
Sbjct: 94  LVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LPQGLSIHG 149

Query: 600 YATLNGLCSDLRIQTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGYAIHGMGEE 421
           Y T  GL   L +  S++ MY +    + A  +F +   + +  W+ ++ GY   G   +
Sbjct: 150 YITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAK 209

Query: 420 ALALFHHLQTNEGYRPDAVVYMGVLSACSHSG 325
             A+F+ ++  +   PD++V++ ++S C  SG
Sbjct: 210 VFAVFNQMRC-QCVGPDSIVFVNLISCCKLSG 240



 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 35/125 (28%), Positives = 70/125 (56%)
 Frame = -1

Query: 1805 MRRRQIEIWNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRD 1626
            +  + + +W S +    + G   E+L ++ + ++ +  R +  T  +VL  CA++ SLR 
Sbjct: 287  VHEKSVFLWTSMISGYAQFGYPNEALHLF-NMLLRTASRPNELTLATVLSACAEMGSLRM 345

Query: 1625 GQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSILS 1446
            G++I  + LL G    L VQT+L+ M+    C+CG +  ++ LF+ +P   L  W+++++
Sbjct: 346  GEEIEQYILLNGLGSDLRVQTSLIHMF----CKCGSIKKAQALFERIPNKDLAVWSAMIN 401

Query: 1445 AYSNH 1431
             Y+ H
Sbjct: 402  GYAVH 406


>ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
            mitochondrial-like [Glycine max]
          Length = 615

 Score =  461 bits (1186), Expect = e-127
 Identities = 224/408 (54%), Positives = 296/408 (72%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTS-DLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYV 1048
            G SIHC  IKLG    ++ L+NS++ MY+ F  +  AR +F+LMD+KS ++WT +IGGYV
Sbjct: 169  GKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYV 228

Query: 1047 NLGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNS 868
             +GH  +A+ LF QM+   + +D VVFLNL+S C ++  L LASSVH+L+LK GC+  + 
Sbjct: 229  KIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP 288

Query: 867  VQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTS 688
            V+N L+ MY KCG+L SARRIF L+ +KS L WTS+I+GY  LG+P EA++LF+ M RT 
Sbjct: 289  VENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD 348

Query: 687  TRPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAK 508
             RPN  TLATV+SACAD           EY  LNGL SD ++QTSLIHMY KCGS  +A+
Sbjct: 349  IRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAR 408

Query: 507  GIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSHS 328
             +F+  + +DL +W+SMIN YAIHGMG EA++LFH + T EG  PDA+VY  V  ACSHS
Sbjct: 409  EVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHS 468

Query: 327  GLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWVP 148
            GLVE+GLK+F+ MQ+++GI P+ EH + L+DLLGR G LDLAL  IQ MP   Q QVW P
Sbjct: 469  GLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGP 528

Query: 147  LLSACRTHRNIQLGELVAKRLFDVAPQNTNNYILMSNMYASVGKWKQA 4
            LLSACR H N++LGEL   RL D +P ++ +Y+LM+N+Y S+GKWK+A
Sbjct: 529  LLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEA 576



 Score =  147 bits (372), Expect = 7e-33
 Identities = 96/373 (25%), Positives = 179/373 (47%), Gaps = 6/373 (1%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVN 1045
            G  +H + +KLGF +D  +  +++ MY     + +AR +F+ M  +S V+W A++  Y  
Sbjct: 65   GTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSR 124

Query: 1044 LGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLS---LASSVHALILKTG-CHH 877
               + QA +L  +M +      +  F++++S  + +       L  S+H  ++K G  + 
Sbjct: 125  RSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYL 184

Query: 876  HNSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMT 697
              S+ NSL+ MY +   +  AR++F L+ +KS + WT++I GY ++G+  EA  LF  M 
Sbjct: 185  EVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQ 244

Query: 696  RTSTRPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFE 517
              S   + +    +IS C                   G      ++  LI MY KCG+  
Sbjct: 245  HQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLT 304

Query: 516  RAKGIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSAC 337
             A+ IFD    + +  W+SMI GY   G   EAL LF  +   +  RP+      V+SAC
Sbjct: 305  SARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTD-IRPNGATLATVVSAC 363

Query: 336  SHSGLVEDG--LKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQT 163
            +  G +  G  ++ +  +    G++   +  ++L+ +  + G +  A ++ + +  +  T
Sbjct: 364  ADLGSLSIGQEIEEYIFLN---GLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLT 420

Query: 162  QVWVPLLSACRTH 124
             VW  ++++   H
Sbjct: 421  -VWTSMINSYAIH 432



 Score =  119 bits (299), Expect = 2e-24
 Identities = 60/125 (48%), Positives = 83/125 (66%)
 Frame = -1

Query: 1799 RRQIEIWNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRDGQ 1620
            RR +  WN  ++  T NG F ++L IY SS+ +SG+ G+N T+P +LK CA L S++ G 
Sbjct: 8    RRSLYTWNLMIRDSTNNGFFTQTLNIY-SSMAHSGVHGNNLTYPLLLKACANLPSIQHGT 66

Query: 1619 KIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSILSAY 1440
             +H H L  GF    FVQTAL+DMYSK    C  V+++R +FDEMP  S+VSWN+++SAY
Sbjct: 67   MLHGHVLKLGFQADTFVQTALVDMYSK----CSHVASARQVFDEMPQRSVVSWNAMVSAY 122

Query: 1439 SNHES 1425
            S   S
Sbjct: 123  SRRSS 127



 Score =  107 bits (267), Expect = 1e-20
 Identities = 72/322 (22%), Positives = 147/322 (45%), Gaps = 5/322 (1%)
 Frame = -3

Query: 1089 KSTVTWTALIGGYVNLGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSV 910
            +S  TW  +I    N G   Q   +++ M    +  +++ +  L+  CA +  +   + +
Sbjct: 9    RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68

Query: 909  HALILKTGCHHHNSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNP 730
            H  +LK G      VQ +LV+MY KC  + SAR++F  +  +S + W +++S Y++  + 
Sbjct: 69   HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128

Query: 729  SEAVNLFKHMTRTSTRPNEITLATVISACAD----XXXXXXXXXXXEYATLNGLCSDLRI 562
             +A++L K M      P   T  +++S  ++                   L  +  ++ +
Sbjct: 129  DQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSL 188

Query: 561  QTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEG 382
              SL+ MY +    + A+ +FD    + +  W++MI GY   G   EA  LF+ +Q ++ 
Sbjct: 189  ANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQ-HQS 247

Query: 381  YRPDAVVYMGVLSACSH-SGLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDL 205
               D VV++ ++S C     L+     H  +++     K   E  + L+ +  + G L  
Sbjct: 248  VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVE--NLLITMYAKCGNLTS 305

Query: 204  ALKIIQVMPVQAQTQVWVPLLS 139
            A +I  ++ ++     W  +++
Sbjct: 306  ARRIFDLI-IEKSMLSWTSMIA 326



 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 35/117 (29%), Positives = 61/117 (52%)
 Frame = -1

Query: 1781 WNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRDGQKIHAHA 1602
            W S +      G   E+L+++   ++ + +R +  T  +V+  CA L SL  GQ+I  + 
Sbjct: 321  WTSMIAGYVHLGHPGEALDLF-RRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYI 379

Query: 1601 LLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSILSAYSNH 1431
             L G      VQT+L+ MYSK    CG +  +R +F+ +    L  W S++++Y+ H
Sbjct: 380  FLNGLESDQQVQTSLIHMYSK----CGSIVKAREVFERVTDKDLTVWTSMINSYAIH 432


>ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like
            [Cucumis sativus] gi|449514868|ref|XP_004164502.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At3g12770-like [Cucumis sativus]
          Length = 601

 Score =  409 bits (1051), Expect = e-111
 Identities = 197/408 (48%), Positives = 278/408 (68%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVN 1045
            G  +H    K     D  + NS++ MY++F QI +A S+F  + +K+ ++WT ++GGY+ 
Sbjct: 175  GRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLK 234

Query: 1044 LGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNSV 865
             G V + F  F+QMR + + LD  VF++++S C ++G L L SS+H+L+LKTG  + + +
Sbjct: 235  AGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPI 294

Query: 864  QNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTST 685
               L++MY KCGDL+SAR +F L+ +KS   WTS+ISGYA  G P EA++LF   T+ + 
Sbjct: 295  GCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNV 354

Query: 684  RPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAKG 505
            RPN   LAT ISACAD            +   +GL SD ++ TSLIH+YCK GS E+A+ 
Sbjct: 355  RPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEK 414

Query: 504  IFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSHSG 325
            +F+S   RDLA WSSM+NGYA+HGMGE+ + LFH +Q   G +PD  VY  +L ACSHSG
Sbjct: 415  VFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQ-RSGIKPDGSVYASILLACSHSG 473

Query: 324  LVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWVPL 145
            LVEDGL+HF+ MQ +YGI P+  HY+ LVD+L RAG+L+LAL  IQ MP Q Q+Q W P 
Sbjct: 474  LVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPF 533

Query: 144  LSACRTHRNIQLGELVAKRLFDVAPQNTNNYILMSNMYASVGKWKQAA 1
            LSACRT+ +++LGE+  + L    P+N  N++LM+N+Y S+GKWK+AA
Sbjct: 534  LSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAA 581



 Score =  162 bits (410), Expect = 3e-37
 Identities = 100/371 (26%), Positives = 176/371 (47%), Gaps = 2/371 (0%)
 Frame = -3

Query: 1230 GAGFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGY 1051
            G G  +H + I +GF SD+ +  S++ MY  F  + A+R +F+    +S ++W ++I  Y
Sbjct: 70   GDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAY 129

Query: 1050 VNLGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCA--RIGRLSLASSVHALILKTGCHH 877
                 V++A  LF +M       +S  F++L+S  A    G L     +H  + K   H 
Sbjct: 130  SRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHD 189

Query: 876  HNSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMT 697
               V+NSLV MY   G + SA  +F+ + +K+ + WT ++ GY + G  ++    F  M 
Sbjct: 190  DTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMR 249

Query: 696  RTSTRPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFE 517
            + +   ++     +IS+C                   GL  +  I   LI MY KCG   
Sbjct: 250  QNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLL 309

Query: 516  RAKGIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSAC 337
             A+ +FD  S + +  W+SMI+GYA  G   EAL+LF  + T    RP+  +    +SAC
Sbjct: 310  SARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLF-SMATQNNVRPNGAMLATAISAC 368

Query: 336  SHSGLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQV 157
            +  G +    +    +Q++ G+   ++  ++L+ L  + G ++ A K+   M +      
Sbjct: 369  ADLGSLSMRREIEAFIQQD-GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-IHRDLAA 426

Query: 156  WVPLLSACRTH 124
            W  +++    H
Sbjct: 427  WSSMMNGYAVH 437



 Score =  112 bits (279), Expect = 4e-22
 Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 13/290 (4%)
 Frame = -3

Query: 1131 QIHAARSLFNLMDDKSTVTWTALIGGYVNLGHVHQAFTLFNQMRLDQLTLDSVVFLNLVS 952
            QIH   S   L+  K    W   I   VN G   Q+   ++ MR   +  ++  F  L+ 
Sbjct: 2    QIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLK 61

Query: 951  CCARIGRLSLASSVHALILKTGCHHHNSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLL 772
             CA +  +   + +HA ++  G      VQ SLV+MY K  +L ++R++F     +S + 
Sbjct: 62   ACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVIS 121

Query: 771  WTSLISGYAQLGNPSEAVNLFKHMTRTSTRPNEITLATVISACADXXXXXXXXXXXEYAT 592
            W S+I+ Y++    +EA+ LF+ M      PN  T  +++S  AD            +  
Sbjct: 122  WNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGC 181

Query: 591  LN--GLCSDLRIQTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGYAIHGMGEEA 418
            L    L  D  ++ SL+ MY   G  + A  +F + S + +  W+ M+ GY   G   + 
Sbjct: 182  LTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKV 241

Query: 417  LALFHHLQTNEGYRPDAVVYMGVLSAC-----------SHSGLVEDGLKH 301
               F  ++ N     D  V++ ++S+C            HS L++ GLK+
Sbjct: 242  FETFSQMRQNNVVL-DKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKY 290



 Score =  111 bits (277), Expect = 8e-22
 Identities = 55/124 (44%), Positives = 83/124 (66%)
 Frame = -1

Query: 1808 VMRRRQIEIWNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLR 1629
            ++ ++ + +WN  +++    G FA+SLE Y S + +SG+ G+NFTFP +LK CA L S+ 
Sbjct: 12   LITKKPLYLWNLTIRSSVNGGFFAQSLETY-SFMRHSGIHGNNFTFPLLLKACANLASIG 70

Query: 1628 DGQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSIL 1449
            DG  +HAH +  GF   +FVQT+L+DMYSK       + ASR +FDE    S++SWNS++
Sbjct: 71   DGTMLHAHLIHVGFESDVFVQTSLVDMYSK----FSNLRASRQVFDETSTRSVISWNSMI 126

Query: 1448 SAYS 1437
            +AYS
Sbjct: 127  AAYS 130


>ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|222873629|gb|EEF10760.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  351 bits (900), Expect = 4e-94
 Identities = 169/307 (55%), Positives = 220/307 (71%)
 Frame = -3

Query: 921 ASSVHALILKTGCHHHNSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQ 742
           ASS+H+LI K GC + + + N L+ MY KCGDL+SAR++F +   K+  LWTS+I GY  
Sbjct: 3   ASSLHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYTH 62

Query: 741 LGNPSEAVNLFKHMTRTSTRPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRI 562
           +G P+EA+ LFK + +T+ +PN  TLAT++SACAD           EY   NG  SD ++
Sbjct: 63  MGYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQV 122

Query: 561 QTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEG 382
           QTSLIHM+ KCGS  +A  +F+  S +DLA WSSMINGYAIHGM EEAL LFH +   + 
Sbjct: 123 QTSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIKE 182

Query: 381 YRPDAVVYMGVLSACSHSGLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLA 202
            +PDAVV+  +L ACSH GLVEDGLK F+ MQ+++GI PS EHY  LVDLLGRAG  +LA
Sbjct: 183 IKPDAVVFTSILLACSHVGLVEDGLKFFKSMQKDFGIVPSVEHYMCLVDLLGRAGQFELA 242

Query: 201 LKIIQVMPVQAQTQVWVPLLSACRTHRNIQLGELVAKRLFDVAPQNTNNYILMSNMYASV 22
           LK I+VMPV+ Q QVW P LSAC  H N++LGEL A++L  + P +  NY+LM+N+Y S+
Sbjct: 243 LKTIRVMPVKLQAQVWAPFLSACTKHCNLELGELAARKLLYMNPGSHANYVLMANLYTSM 302

Query: 21  GKWKQAA 1
           GKWK+AA
Sbjct: 303 GKWKEAA 309



 Score =  114 bits (285), Expect = 9e-23
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
 Frame = -3

Query: 1227 AGFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYV 1048
            A  S+H    K G  +   L N ++ MY     + +AR +F++   K+   WT++IGGY 
Sbjct: 2    AASSLHSLIFKCGCENKDPLDNLLLGMYAKCGDLISARKVFDMALVKTVFLWTSIIGGYT 61

Query: 1047 NLGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNS 868
            ++G+  +A  LF ++    +  +      ++S CA +G L +   +   IL  G      
Sbjct: 62   HMGYPAEALLLFKKLLKTAIKPNGATLATILSACADLGSLDMGKEIEEYILSNGFQSDRQ 121

Query: 867  VQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTR-T 691
            VQ SL++M+ KCG +  A  +F  + DK    W+S+I+GYA  G   EA+ LF  M    
Sbjct: 122  VQTSLIHMFSKCGSIGKAISVFERISDKDLAAWSSMINGYAIHGMAEEALGLFHKMLEIK 181

Query: 690  STRPNEITLATVISACA 640
              +P+ +   +++ AC+
Sbjct: 182  EIKPDAVVFTSILLACS 198



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 34/122 (27%), Positives = 66/122 (54%)
 Frame = -1

Query: 1796 RQIEIWNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRDGQK 1617
            + + +W S +   T  G  AE+L + +  ++ + ++ +  T  ++L  CA L SL  G++
Sbjct: 48   KTVFLWTSIIGGYTHMGYPAEAL-LLFKKLLKTAIKPNGATLATILSACADLGSLDMGKE 106

Query: 1616 IHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSILSAYS 1437
            I  + L  GF     VQT+L+ M+SK    CG +  +  +F+ +    L +W+S+++ Y+
Sbjct: 107  IEEYILSNGFQSDRQVQTSLIHMFSK----CGSIGKAISVFERISDKDLAAWSSMINGYA 162

Query: 1436 NH 1431
             H
Sbjct: 163  IH 164


>ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
            [Brachypodium distachyon]
          Length = 598

 Score =  346 bits (887), Expect = 1e-92
 Identities = 174/409 (42%), Positives = 265/409 (64%), Gaps = 2/409 (0%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVN 1045
            G  ++ Y++K G  +DL + NS++TM +   Q++ A  LF+ M +KS VTW+A++ G++ 
Sbjct: 166  GLCLYGYSMKSGLDTDLPVLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQ 225

Query: 1044 LGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNSV 865
             G   + F LFN M+      DSV  +NL+S    +G L +A  VHAL++K+G      +
Sbjct: 226  TGDYMKVFGLFNHMQTAGYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDL 285

Query: 864  QNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTST 685
             +SLVN+Y KCGDL +A+ +F  V  K+ +LWTS+ISGYA+ G+P +A+ +F  M  T  
Sbjct: 286  MSSLVNLYAKCGDLEAAQEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDV 345

Query: 684  RPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAKG 505
             PNE T+++V+SACA+           ++    GL  DLR+ T LI  YCKCG+   A+ 
Sbjct: 346  EPNEATVSSVLSACANLGSANQAKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLARE 405

Query: 504  IFD--SASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSH 331
            IFD  + + RDLA+WS+MINGYA  G G EAL LF+ +Q N+G +PDA+V+  +L+AC++
Sbjct: 406  IFDGVTTTNRDLAIWSAMINGYACIGEGSEALVLFNEMQ-NQGVQPDAIVFTHLLTACNY 464

Query: 330  SGLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWV 151
            SGLV++GL+ F+ +  EYGI+PS EHY   +DLL +AG+L  A +  + +P+Q Q QV  
Sbjct: 465  SGLVDEGLQCFRSLTVEYGIEPSIEHYMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLA 524

Query: 150  PLLSACRTHRNIQLGELVAKRLFDVAPQNTNNYILMSNMYASVGKWKQA 4
            P+L+A   H      ELV++ L ++ P N+++ +LM+NM   +GKWK+A
Sbjct: 525  PILTAYSAHCADSSIELVSEELLNLEPHNSDHCVLMANMLNCLGKWKKA 573



 Score =  143 bits (360), Expect = 2e-31
 Identities = 92/366 (25%), Positives = 172/366 (46%), Gaps = 4/366 (1%)
 Frame = -3

Query: 1224 GFSIHCYTIKLGFTSDLLLSNSIITMYLHFHQIHAARSLFNLMDDKSTVTWTALIGGYVN 1045
            G S+H + + +G  SD+ +  S++ MY     +  AR LF+ M   + ++W  ++  Y  
Sbjct: 64   GCSVHAHALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSK 123

Query: 1044 LGHVHQAFTLFNQMRLDQLTLDSVVFLNLVSCCARIGRLSLAS---SVHALILKTGCHHH 874
               V +A  +FN MR   +       + L+S   R+  LS  +    ++   +K+G    
Sbjct: 124  SSCVTEAVAMFNTMRGVGVRPSGATLVGLLS--GRVDSLSTRNPGLCLYGYSMKSGLDTD 181

Query: 873  NSVQNSLVNMYPKCGDLVSARRIFHLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTR 694
              V NS++ M  + G L  A  +F  + +KS + W++++SG+ Q G+  +   LF HM  
Sbjct: 182  LPVLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQT 241

Query: 693  TSTRPNEITLATVISACADXXXXXXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFER 514
               + + + L  +ISA                   +G  S+  + +SL+++Y KCG  E 
Sbjct: 242  AGYKFDSVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEA 301

Query: 513  AKGIFDSASGRDLAMWSSMINGYAIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACS 334
            A+ +FD+   +++ +W+SMI+GYA  G  ++AL +F  +   +   P+      VLSAC+
Sbjct: 302  AQEVFDAVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTD-VEPNEATVSSVLSACA 360

Query: 333  HSGLVEDGLKHFQIMQREYGIKPSTEHYSALVDLLGRAGYLDLALKIIQ-VMPVQAQTQV 157
            + G      K  +      G++      + L+D   + G + LA +I   V        +
Sbjct: 361  NLGSANQA-KKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAI 419

Query: 156  WVPLLS 139
            W  +++
Sbjct: 420  WSAMIN 425



 Score =  112 bits (279), Expect = 4e-22
 Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 3/284 (1%)
 Frame = -3

Query: 981 DSVVFLNLVSCCARIGRLSLASSVHALILKTGCHHHNSVQNSLVNMYPKCGDLVSARRIF 802
           D+  F +L   CA +    L  SVHA  L  G      V  SL++MY KC  L  ARR+F
Sbjct: 44  DASTFPSLAKSCAALRLPRLGCSVHAHALLVGAASDVFVLTSLLDMYAKCACLPDARRLF 103

Query: 801 HLVKDKSTLLWTSLISGYAQLGNPSEAVNLFKHMTRTSTRPNEITLATVISACAD-XXXX 625
             +   + + W  +++ Y++    +EAV +F  M     RP+  TL  ++S   D     
Sbjct: 104 DEMPSPTLISWNCMVTAYSKSSCVTEAVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTR 163

Query: 624 XXXXXXXEYATLNGLCSDLRIQTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGY 445
                   Y+  +GL +DL +  S++ M  + G    A  +FDS   + +  WS+M++G+
Sbjct: 164 NPGLCLYGYSMKSGLDTDLPVLNSVLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGF 223

Query: 444 AIHGMGEEALALFHHLQTNEGYRPDAVVYMGVLSACSHSG--LVEDGLKHFQIMQREYGI 271
              G   +   LF+H+QT  GY+ D+V  + ++SA    G  LV  G+    I   + G 
Sbjct: 224 LQTGDYMKVFGLFNHMQT-AGYKFDSVALVNLISAAVLLGNLLVAKGVHALLI---KSGF 279

Query: 270 KPSTEHYSALVDLLGRAGYLDLALKIIQVMPVQAQTQVWVPLLS 139
           +   +  S+LV+L  + G L+ A ++   +  +    +W  ++S
Sbjct: 280 ESEQDLMSSLVNLYAKCGDLEAAQEVFDAVH-RKNVVLWTSMIS 322



 Score =  103 bits (258), Expect = 1e-19
 Identities = 53/115 (46%), Positives = 74/115 (64%)
 Frame = -1

Query: 1781 WNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRDGQKIHAHA 1602
            WN  ++    +G ++  L  +Y  ++ +GL GD  TFPS+ K CA LR  R G  +HAHA
Sbjct: 13   WNRLIQLAAASGSYSRCLR-HYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHA 71

Query: 1601 LLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPSLVSWNSILSAYS 1437
            LL G    +FV T+LLDMY+KC C    +  +R LFDEMP P+L+SWN +++AYS
Sbjct: 72   LLVGAASDVFVLTSLLDMYAKCAC----LPDARRLFDEMPSPTLISWNCMVTAYS 122



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 34/125 (27%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
 Frame = -1

Query: 1805 MRRRQIEIWNSKMKACTENGQFAESLEIYYSSVVNSGLRGDNFTFPSVLKCCAKLRSLRD 1626
            + R+ + +W S +    E G   ++L+++  S++ + +  +  T  SVL  CA L S   
Sbjct: 309  VHRKNVVLWTSMISGYAEGGHPDKALKMF-DSMLCTDVEPNEATVSSVLSACANLGSANQ 367

Query: 1625 GQKIHAHALLTGFHQHLFVQTALLDMYSKCQCQCGGVSASRLLFDEMPLPS--LVSWNSI 1452
             +K+  H +  G  + L V T L+D Y    C+CG V+ +R +FD +   +  L  W+++
Sbjct: 368  AKKVEDHVVAIGLQKDLRVATGLIDTY----CKCGNVTLAREIFDGVTTTNRDLAIWSAM 423

Query: 1451 LSAYS 1437
            ++ Y+
Sbjct: 424  INGYA 428



 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 38/143 (26%), Positives = 62/143 (43%)
 Frame = -3

Query: 771 WTSLISGYAQLGNPSEAVNLFKHMTRTSTRPNEITLATVISACADXXXXXXXXXXXEYAT 592
           W  LI   A  G+ S  +  +  +       +  T  ++  +CA             +A 
Sbjct: 13  WNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHAL 72

Query: 591 LNGLCSDLRIQTSLIHMYCKCGSFERAKGIFDSASGRDLAMWSSMINGYAIHGMGEEALA 412
           L G  SD+ + TSL+ MY KC     A+ +FD      L  W+ M+  Y+      EA+A
Sbjct: 73  LVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAVA 132

Query: 411 LFHHLQTNEGYRPDAVVYMGVLS 343
           +F+ ++   G RP     +G+LS
Sbjct: 133 MFNTMR-GVGVRPSGATLVGLLS 154