BLASTX nr result

ID: Coptis25_contig00016442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016442
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635364.1| PREDICTED: uncharacterized protein LOC100242...   113   1e-22
ref|XP_002525239.1| catalytic, putative [Ricinus communis] gi|22...   111   5e-22
ref|XP_003563634.1| PREDICTED: uncharacterized protein LOC100831...   105   3e-20
ref|XP_002438665.1| hypothetical protein SORBIDRAFT_10g023905 [S...   105   4e-20
emb|CBI25864.3| unnamed protein product [Vitis vinifera]              103   9e-20

>ref|XP_003635364.1| PREDICTED: uncharacterized protein LOC100242843 [Vitis vinifera]
          Length = 283

 Score =  113 bits (282), Expect = 1e-22
 Identities = 75/161 (46%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
 Frame = -3

Query: 1429 ILYEIISGLQTVGTDAASSSAAPCIPVANSLGGLLLS---PITSVGSLLDEDSSAYNLER 1259
            +LYEII+GL+T GTDAASSS+AP    +    G  LS   P+TSV S+L+E+ S      
Sbjct: 122  VLYEIIAGLRTAGTDAASSSSAPPSISSTKFVGEFLSEIAPVTSV-SMLNEEISING--- 177

Query: 1258 NVDDDPSHLQVTLNSQHEECCSYASSNRESWGRCSSLGGSDRDPSFEDHMIKDMNKN-QM 1082
               DDP H Q   N Q++ECCSY SSNRESWGRCSSLGGSD + S +     + ++N Q+
Sbjct: 178  ---DDPLHFQDKPNGQNDECCSYTSSNRESWGRCSSLGGSDEETSADCAAANNSHQNRQI 234

Query: 1081 TLKALATPLRRMQRXXXXXXXXXXXXEALSQRLRLYILKRV 959
              +      +                EALSQRLRL ILKRV
Sbjct: 235  HQRKKKKKTKPPTAPKKPKREKFEKLEALSQRLRLCILKRV 275


>ref|XP_002525239.1| catalytic, putative [Ricinus communis] gi|223535536|gb|EEF37205.1|
            catalytic, putative [Ricinus communis]
          Length = 493

 Score =  111 bits (277), Expect = 5e-22
 Identities = 69/134 (51%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
 Frame = -3

Query: 1432 SILYEIISGLQTVGTDAASSSAAP-CIPVANSLGGLLLS--PITSVGSLLDEDSSAYNLE 1262
            S+L EII+GL++  TDAASSSAAP  IP    +  L+    P+TS+      DS     +
Sbjct: 313  SLLCEIITGLRSACTDAASSSAAPPSIPTIKPVSELISEAVPVTSIAV----DSVVNEND 368

Query: 1261 RNVDDDPSHLQVTLNSQHEECCSYASSNRESWGRCSSLGGSDRDPSFEDHMIKDMNKNQM 1082
            R   DDPS LQ   N Q EECCSY SSNRESWGRCSSLG SD + S E       N ++M
Sbjct: 369  RISSDDPSKLQDKPNGQSEECCSYTSSNRESWGRCSSLGCSDEESSAECRAAD--NSHEM 426

Query: 1081 TLKALATPLRRMQR 1040
             LKA ATPLR +Q+
Sbjct: 427  ALKAFATPLRSIQQ 440


>ref|XP_003563634.1| PREDICTED: uncharacterized protein LOC100831715 [Brachypodium
            distachyon]
          Length = 497

 Score =  105 bits (262), Expect = 3e-20
 Identities = 67/142 (47%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
 Frame = -3

Query: 1432 SILYEIISGLQTVGTDAASSSAAPC--IPVANSLGGLLLSPITSVGS--------LLDED 1283
            S+LYEII+GL+  GTDA SSSAA         S+  LL   +  +          LLDE+
Sbjct: 309  SLLYEIINGLRAAGTDAGSSSAAATSLTNATKSVVELLTERVNQLSVKNDNDLDFLLDEN 368

Query: 1282 SSAYNLERNVDDDPSHLQVTLNSQHEECCSYASSNRESWGRCSSLG-GSDRDPSFEDHMI 1106
             +   ++ N  +  SH Q   N Q+EECCSY SS RESWGRCSSLG  SDR  S E   I
Sbjct: 369  HNLTEMDSNTAE--SHTQDKTNRQNEECCSYTSSTRESWGRCSSLGAASDRSSSGERPGI 426

Query: 1105 KDMNKNQMTLKALATPLRRMQR 1040
             +     MTL+ALATPLRR++R
Sbjct: 427  SNNKHKSMTLRALATPLRRIRR 448


>ref|XP_002438665.1| hypothetical protein SORBIDRAFT_10g023905 [Sorghum bicolor]
            gi|241916888|gb|EER90032.1| hypothetical protein
            SORBIDRAFT_10g023905 [Sorghum bicolor]
          Length = 501

 Score =  105 bits (261), Expect = 4e-20
 Identities = 65/142 (45%), Positives = 83/142 (58%), Gaps = 11/142 (7%)
 Frame = -3

Query: 1432 SILYEIISGLQTVGTDAASSSAAPC--IPVANSLGGLLLSPITSVGS--------LLDED 1283
            S+LYEII+GL+  GTDA SSSAA         S+  LL   +  +          LLDE+
Sbjct: 311  SLLYEIINGLRAAGTDAGSSSAATANFTNATKSVVELLTERVNQLSVKNDNDLDFLLDEN 370

Query: 1282 SSAYNLERNVDDDPSHLQVTLNSQHEECCSYASSNRESWGRCSSLGG-SDRDPSFEDHMI 1106
             +   ++ N  +   HL+   N Q EECCSY SSNRESWGRCSSLGG SD   S E   +
Sbjct: 371  QNLTEMDGNTGE--CHLEDKANRQTEECCSYTSSNRESWGRCSSLGGASDGSSSGEQPEV 428

Query: 1105 KDMNKNQMTLKALATPLRRMQR 1040
             +     M+L+ALATPLRR++R
Sbjct: 429  PNHKNKSMSLRALATPLRRVRR 450


>emb|CBI25864.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score =  103 bits (258), Expect = 9e-20
 Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
 Frame = -3

Query: 1429 ILYEIISGLQTVGTDAASSSAAPCIPVANSLGGLLLS---PITSVGSLLDEDSSAYNLER 1259
            +LYEII+GL+T GTDAASSS+AP    +    G  LS   P+TSV S+L+E+ S      
Sbjct: 144  VLYEIIAGLRTAGTDAASSSSAPPSISSTKFVGEFLSEIAPVTSV-SMLNEEISING--- 199

Query: 1258 NVDDDPSHLQVTLNSQHEECCSYASSNRESWGRCSSLGGSDRDPS 1124
               DDP H Q   N Q++ECCSY SSNRESWGRCSSLGGSD + S
Sbjct: 200  ---DDPLHFQDKPNGQNDECCSYTSSNRESWGRCSSLGGSDEETS 241


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