BLASTX nr result

ID: Coptis25_contig00016440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016440
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chlor...   184   5e-62
emb|CAN73180.1| hypothetical protein VITISV_043178 [Vitis vinifera]   184   5e-62
ref|NP_187013.1| cysteine synthase A [Arabidopsis thaliana] gi|1...   183   9e-61
ref|XP_003564468.1| PREDICTED: probable cysteine synthase, chlor...   176   2e-60
ref|XP_002884400.1| hypothetical protein ARALYDRAFT_896375 [Arab...   182   3e-60

>ref|XP_002271966.2| PREDICTED: probable cysteine synthase, chloroplastic-like [Vitis
           vinifera] gi|296085861|emb|CBI31185.3| unnamed protein
           product [Vitis vinifera]
          Length = 390

 Score =  184 bits (468), Expect(2) = 5e-62
 Identities = 92/119 (77%), Positives = 99/119 (83%)
 Frame = +1

Query: 1   AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 180
           AFVAATKGYKLIVTMPASI++ERR+LLRAFGAEI+LTDP KG+KGAVDKAEEI    PNA
Sbjct: 162 AFVAATKGYKLIVTMPASIDIERRILLRAFGAEIVLTDPMKGIKGAVDKAEEIVQSMPNA 221

Query: 181 YMFQQFDNPANTKIHFETTGPEIWEDTMGSVDIFVAAIXXXXXXXXXXSYLKMMNKDIK 357
           YMFQQFDN AN KIHFETTGPEIWEDT+GSVDIFVA I           YLKMM +DIK
Sbjct: 222 YMFQQFDNMANAKIHFETTGPEIWEDTVGSVDIFVAGIGTGGTVTGTGRYLKMMKRDIK 280



 Score = 79.0 bits (193), Expect(2) = 5e-62
 Identities = 42/74 (56%), Positives = 47/74 (63%)
 Frame = +3

Query: 357 VGVEPAETSTISGDKPGYIPSIXXXXXXXXXXXXTTGEAVDMARRLALEEGLLVGISSGX 536
           VGVEPA+ S ISGD PGY+PSI            T  EAV+MAR+LALEEGLLVGISSG 
Sbjct: 282 VGVEPADRSVISGDNPGYVPSILDVKLLDEVLKVTNDEAVEMARKLALEEGLLVGISSGA 341

Query: 537 XXXXXXXXXKRPES 578
                    KRPE+
Sbjct: 342 AAAAAISIAKRPEN 355


>emb|CAN73180.1| hypothetical protein VITISV_043178 [Vitis vinifera]
          Length = 361

 Score =  184 bits (468), Expect(2) = 5e-62
 Identities = 92/119 (77%), Positives = 99/119 (83%)
 Frame = +1

Query: 1   AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 180
           AFVAATKGYKLIVTMPASI++ERR+LLRAFGAEI+LTDP KG+KGAVDKAEEI    PNA
Sbjct: 66  AFVAATKGYKLIVTMPASIDIERRILLRAFGAEIVLTDPMKGIKGAVDKAEEIVQSMPNA 125

Query: 181 YMFQQFDNPANTKIHFETTGPEIWEDTMGSVDIFVAAIXXXXXXXXXXSYLKMMNKDIK 357
           YMFQQFDN AN KIHFETTGPEIWEDT+GSVDIFVA I           YLKMM +DIK
Sbjct: 126 YMFQQFDNMANAKIHFETTGPEIWEDTVGSVDIFVAGIGTGGTVTGTGRYLKMMKRDIK 184



 Score = 79.0 bits (193), Expect(2) = 5e-62
 Identities = 42/74 (56%), Positives = 47/74 (63%)
 Frame = +3

Query: 357 VGVEPAETSTISGDKPGYIPSIXXXXXXXXXXXXTTGEAVDMARRLALEEGLLVGISSGX 536
           VGVEPA+ S ISGD PGY+PSI            T  EAV+MAR+LALEEGLLVGISSG 
Sbjct: 186 VGVEPADRSVISGDNPGYVPSILDVKLLDEVLKVTNDEAVEMARKLALEEGLLVGISSGA 245

Query: 537 XXXXXXXXXKRPES 578
                    KRPE+
Sbjct: 246 AAAAAISIAKRPEN 259


>ref|NP_187013.1| cysteine synthase A [Arabidopsis thaliana]
           gi|11131558|sp|O22682.1|CYSK4_ARATH RecName:
           Full=Probable cysteine synthase, chloroplastic;
           Short=CSase; AltName: Full=CS26; AltName:
           Full=O-acetylserine (thiol)-lyase; Short=OAS-TL;
           AltName: Full=O-acetylserine sulfhydrylase; Flags:
           Precursor gi|6091759|gb|AAF03469.1|AC009327_8
           O-acetylserine (thiol) lyase [Arabidopsis thaliana]
           gi|2281780|dbj|BAA21628.1| O-acetylserine (thiol) lyase
           [Arabidopsis thaliana] gi|20466215|gb|AAM20425.1|
           O-acetylserine (thiol) lyase [Arabidopsis thaliana]
           gi|25084065|gb|AAN72166.1| O-acetylserine (thiol) lyase
           [Arabidopsis thaliana] gi|332640444|gb|AEE73965.1|
           cysteine synthase A [Arabidopsis thaliana]
          Length = 404

 Score =  183 bits (465), Expect(2) = 9e-61
 Identities = 91/119 (76%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 180
           AFVAA KGYKLIVTMPASIN+ERR+LLRA GAEI+LT+P KG+KGAVDKA+EI  +T NA
Sbjct: 177 AFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLTNPEKGLKGAVDKAKEIVLKTKNA 236

Query: 181 YMFQQFDNPANTKIHFETTGPEIWEDTMGSVDIFVAAIXXXXXXXXXXSYLKMMNKDIK 357
           YMFQQFDN ANTKIHFETTGPEIWEDTMG+VDIFVA I           +LKMMNKDIK
Sbjct: 237 YMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIK 295



 Score = 75.9 bits (185), Expect(2) = 9e-61
 Identities = 40/74 (54%), Positives = 46/74 (62%)
 Frame = +3

Query: 357 VGVEPAETSTISGDKPGYIPSIXXXXXXXXXXXXTTGEAVDMARRLALEEGLLVGISSGX 536
           VGVEP+E S ISGD PGY+P I            + GEA++MARRLALEEGLLVGISSG 
Sbjct: 297 VGVEPSERSVISGDNPGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGA 356

Query: 537 XXXXXXXXXKRPES 578
                    KR E+
Sbjct: 357 AAVAAVSLAKRAEN 370


>ref|XP_003564468.1| PREDICTED: probable cysteine synthase, chloroplastic-like isoform 1
           [Brachypodium distachyon]
          Length = 380

 Score =  176 bits (445), Expect(2) = 2e-60
 Identities = 85/119 (71%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 180
           A VAA +GYKLI TMP+SI++ERR+LLRAFGAEI+LTDPA G+KGA+DKAEEIA +TPNA
Sbjct: 152 ASVAAARGYKLIATMPSSIDVERRILLRAFGAEIVLTDPATGLKGALDKAEEIASKTPNA 211

Query: 181 YMFQQFDNPANTKIHFETTGPEIWEDTMGSVDIFVAAIXXXXXXXXXXSYLKMMNKDIK 357
           YMFQQF+N AN++IHF+TTGPEIWEDT+G+VDI VA+I           YLKMMNKDIK
Sbjct: 212 YMFQQFNNSANSEIHFQTTGPEIWEDTLGTVDILVASIGTGGTITGTGRYLKMMNKDIK 270



 Score = 82.8 bits (203), Expect(2) = 2e-60
 Identities = 44/74 (59%), Positives = 49/74 (66%)
 Frame = +3

Query: 357 VGVEPAETSTISGDKPGYIPSIXXXXXXXXXXXXTTGEAVDMARRLALEEGLLVGISSGX 536
           +GVEPAETS ISGD PGYIPSI            TT EAVD+AR+LAL+EGLLVGISSG 
Sbjct: 272 IGVEPAETSVISGDSPGYIPSILDVQLLDEVVKVTTAEAVDVARQLALKEGLLVGISSGA 331

Query: 537 XXXXXXXXXKRPES 578
                    KRPE+
Sbjct: 332 AAVAAMNVAKRPEN 345


>ref|XP_002884400.1| hypothetical protein ARALYDRAFT_896375 [Arabidopsis lyrata subsp.
           lyrata] gi|297330240|gb|EFH60659.1| hypothetical protein
           ARALYDRAFT_896375 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score =  182 bits (461), Expect(2) = 3e-60
 Identities = 90/119 (75%), Positives = 100/119 (84%)
 Frame = +1

Query: 1   AFVAATKGYKLIVTMPASINLERRLLLRAFGAEIILTDPAKGMKGAVDKAEEIAHRTPNA 180
           AFVAA KGYKLIVTMPASIN+ERR+LLRA GAEI+LT+P KG++GAVDKA+EI  +T NA
Sbjct: 178 AFVAAAKGYKLIVTMPASINVERRMLLRALGAEIVLTNPEKGLRGAVDKAKEIVLKTKNA 237

Query: 181 YMFQQFDNPANTKIHFETTGPEIWEDTMGSVDIFVAAIXXXXXXXXXXSYLKMMNKDIK 357
           YMFQQFDN ANTKIHFETTGPEIWEDTMG+VDIFVA I           +LKMMNKDIK
Sbjct: 238 YMFQQFDNTANTKIHFETTGPEIWEDTMGNVDIFVAGIGTGGTVTGTGGFLKMMNKDIK 296



 Score = 75.9 bits (185), Expect(2) = 3e-60
 Identities = 40/74 (54%), Positives = 46/74 (62%)
 Frame = +3

Query: 357 VGVEPAETSTISGDKPGYIPSIXXXXXXXXXXXXTTGEAVDMARRLALEEGLLVGISSGX 536
           VGVEP+E S ISGD PGY+P I            + GEA++MARRLALEEGLLVGISSG 
Sbjct: 298 VGVEPSERSVISGDNPGYLPGILDVKLLDEVFKVSNGEAIEMARRLALEEGLLVGISSGA 357

Query: 537 XXXXXXXXXKRPES 578
                    KR E+
Sbjct: 358 AAVAAISLAKRAEN 371


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