BLASTX nr result
ID: Coptis25_contig00016436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016436 (503 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera] 81 1e-13 ref|XP_002283177.1| PREDICTED: translation initiation factor eIF... 79 4e-13 ref|XP_002275165.2| PREDICTED: translation initiation factor eIF... 69 4e-10 ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2... 65 7e-09 ref|XP_004138220.1| PREDICTED: translation initiation factor eIF... 62 4e-08 >emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera] Length = 841 Score = 80.9 bits (198), Expect = 1e-13 Identities = 68/165 (41%), Positives = 77/165 (46%), Gaps = 14/165 (8%) Frame = -3 Query: 453 LKTLT*--H*PNKMETRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXX 280 LKTLT P M+ RR +R+VIDPK+RQVGFF RT S P E Sbjct: 53 LKTLTHIHETPLHMDPRRG-ARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVA 108 Query: 279 XXXXXXXXXXPVMIPPPRHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSS-- 112 PVMIPPPRH SDN+ P PLRR GD + GSYNPSE F + Sbjct: 109 DNSPTGNSLSPVMIPPPRHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSP 166 Query: 111 --------GAGLSSESNXXXXXXXXXXXXKVASSLPSGGFEMGAV 1 G G SE KVASS P GGF++ AV Sbjct: 167 TASFYSKVGDGEFSEDASGAGWTHRGNSGKVASSFPGGGFDLTAV 211 >ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] Length = 650 Score = 79.0 bits (193), Expect = 4e-13 Identities = 60/148 (40%), Positives = 68/148 (45%), Gaps = 12/148 (8%) Frame = -3 Query: 408 RTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVMIPPP 229 R +R+VIDPK+RQVGFF RT S P E PVMIPPP Sbjct: 4 RRGARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 60 Query: 228 RHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSS----------GAGLSSESN 85 RH SDN+ P PLRR GD + GSYNPSE F + G G SE Sbjct: 61 RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYSKVGDGEFSEDA 118 Query: 84 XXXXXXXXXXXXKVASSLPSGGFEMGAV 1 KVASS P GGF++ AV Sbjct: 119 SGAGWTHRGNSGKVASSFPGGGFDLTAV 146 >ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed protein product [Vitis vinifera] Length = 649 Score = 68.9 bits (167), Expect = 4e-10 Identities = 59/151 (39%), Positives = 71/151 (47%), Gaps = 11/151 (7%) Frame = -3 Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVE-XXXXXXXXXXXXXXXXXPV 244 ME RRT SR+ IDPK+RQVGFF + +R+ S P+ PV Sbjct: 1 MEARRT-SRIPIDPKVRQVGFFAPGALR---DRSQSGPLGFSSSPPVSNISPTGNSLSPV 56 Query: 243 MIPPPRHVSDNITFKFPM------SPLRRLSSGDNVLHGSYNPSELFL----SSGAGLSS 94 MIPPPRH SDN P+ S LR + D + GSY+ SEL L SS G Sbjct: 57 MIPPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASSRIGDGE 116 Query: 93 ESNXXXXXXXXXXXXKVASSLPSGGFEMGAV 1 S K ASSLPSGGF+ A+ Sbjct: 117 FSEDYSVFFRRSSSGKFASSLPSGGFDSTAM 147 >ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1| predicted protein [Populus trichocarpa] Length = 349 Score = 64.7 bits (156), Expect = 7e-09 Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 9/121 (7%) Frame = -3 Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 241 M+ RR T+ + P++RQVGFFT N +RT SFP PVM Sbjct: 1 MDARRATTTV---PRVRQVGFFTPNAPPAQPSRTQSFP-RDSSSPPLSNSPASNSLSPVM 56 Query: 240 IPPPRHVSDNITFKFPMSPL---------RRLSSGDNVLHGSYNPSELFLSSGAGLSSES 88 IPPPRH+SDN+ + SPL R + S + GSYNPSE L S L+S S Sbjct: 57 IPPPRHLSDNLVHR-ATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSSPPLASPS 115 Query: 87 N 85 + Sbjct: 116 S 116 >ref|XP_004138220.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] gi|449477114|ref|XP_004154933.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like [Cucumis sativus] Length = 643 Score = 62.4 bits (150), Expect = 4e-08 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 12/151 (7%) Frame = -3 Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 241 M+ RR + V++PKIRQVGFFT + P R+ S P + VM Sbjct: 1 MDARRGSR--VVNPKIRQVGFFTLDPPN-PPGRSLSGPADCTPSQQSLSPPSNSLSP-VM 56 Query: 240 IPPPRHVSDNITFK---FPM-SPLRRLSSGDNVLHGSYNPSELFLSSGAG--------LS 97 IPPPRH+SDN+ + FP+ P S D++ GSYNPSE+ L++ Sbjct: 57 IPPPRHLSDNLASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLATSPSGRIGDEELDM 116 Query: 96 SESNXXXXXXXXXXXXKVASSLPSGGFEMGA 4 SE + K+ASS P G M A Sbjct: 117 SEDSFTSVPYRRSGSGKIASSFPGVGIYMAA 147