BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016436
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]    81   1e-13
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...    79   4e-13
ref|XP_002275165.2| PREDICTED: translation initiation factor eIF...    69   4e-10
ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_004138220.1| PREDICTED: translation initiation factor eIF...    62   4e-08

>emb|CAN69725.1| hypothetical protein VITISV_009152 [Vitis vinifera]
          Length = 841

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 68/165 (41%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
 Frame = -3

Query: 453 LKTLT*--H*PNKMETRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXX 280
           LKTLT     P  M+ RR  +R+VIDPK+RQVGFF          RT S P E       
Sbjct: 53  LKTLTHIHETPLHMDPRRG-ARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVA 108

Query: 279 XXXXXXXXXXPVMIPPPRHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSS-- 112
                     PVMIPPPRH SDN+    P    PLRR   GD +  GSYNPSE F  +  
Sbjct: 109 DNSPTGNSLSPVMIPPPRHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSP 166

Query: 111 --------GAGLSSESNXXXXXXXXXXXXKVASSLPSGGFEMGAV 1
                   G G  SE              KVASS P GGF++ AV
Sbjct: 167 TASFYSKVGDGEFSEDASGAGWTHRGNSGKVASSFPGGGFDLTAV 211


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 60/148 (40%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
 Frame = -3

Query: 408 RTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVMIPPP 229
           R  +R+VIDPK+RQVGFF          RT S P E                 PVMIPPP
Sbjct: 4   RRGARVVIDPKVRQVGFFAPG---ASPGRTQSGPPESSSPPVADNSPTGNSLSPVMIPPP 60

Query: 228 RHVSDNITFKFP--MSPLRRLSSGDNVLHGSYNPSELFLSS----------GAGLSSESN 85
           RH SDN+    P    PLRR   GD +  GSYNPSE F  +          G G  SE  
Sbjct: 61  RHASDNLLSARPALYPPLRR--PGDTIPVGSYNPSEFFHGTSPTASFYSKVGDGEFSEDA 118

Query: 84  XXXXXXXXXXXXKVASSLPSGGFEMGAV 1
                       KVASS P GGF++ AV
Sbjct: 119 SGAGWTHRGNSGKVASSFPGGGFDLTAV 146


>ref|XP_002275165.2| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera] gi|297734159|emb|CBI15406.3| unnamed
           protein product [Vitis vinifera]
          Length = 649

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 59/151 (39%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
 Frame = -3

Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVE-XXXXXXXXXXXXXXXXXPV 244
           ME RRT SR+ IDPK+RQVGFF     +   +R+ S P+                   PV
Sbjct: 1   MEARRT-SRIPIDPKVRQVGFFAPGALR---DRSQSGPLGFSSSPPVSNISPTGNSLSPV 56

Query: 243 MIPPPRHVSDNITFKFPM------SPLRRLSSGDNVLHGSYNPSELFL----SSGAGLSS 94
           MIPPPRH SDN     P+      S LR  +  D +  GSY+ SEL L    SS  G   
Sbjct: 57  MIPPPRHASDNFVLSRPLAVPVSDSTLRPPAVEDRMAVGSYDASELLLGTSASSRIGDGE 116

Query: 93  ESNXXXXXXXXXXXXKVASSLPSGGFEMGAV 1
            S             K ASSLPSGGF+  A+
Sbjct: 117 FSEDYSVFFRRSSSGKFASSLPSGGFDSTAM 147


>ref|XP_002318563.1| predicted protein [Populus trichocarpa] gi|222859236|gb|EEE96783.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
 Frame = -3

Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 241
           M+ RR T+ +   P++RQVGFFT N      +RT SFP                   PVM
Sbjct: 1   MDARRATTTV---PRVRQVGFFTPNAPPAQPSRTQSFP-RDSSSPPLSNSPASNSLSPVM 56

Query: 240 IPPPRHVSDNITFKFPMSPL---------RRLSSGDNVLHGSYNPSELFLSSGAGLSSES 88
           IPPPRH+SDN+  +   SPL         R + S    + GSYNPSE  L S   L+S S
Sbjct: 57  IPPPRHLSDNLVHR-ATSPLPVPEPPAFRRPIRSHHVAVVGSYNPSESLLGSSPPLASPS 115

Query: 87  N 85
           +
Sbjct: 116 S 116


>ref|XP_004138220.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Cucumis sativus] gi|449477114|ref|XP_004154933.1|
           PREDICTED: translation initiation factor eIF-2B subunit
           delta-like [Cucumis sativus]
          Length = 643

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
 Frame = -3

Query: 420 METRRTTSRMVIDPKIRQVGFFTSNEYQIPANRTHSFPVEXXXXXXXXXXXXXXXXXPVM 241
           M+ RR +   V++PKIRQVGFFT +    P  R+ S P +                  VM
Sbjct: 1   MDARRGSR--VVNPKIRQVGFFTLDPPN-PPGRSLSGPADCTPSQQSLSPPSNSLSP-VM 56

Query: 240 IPPPRHVSDNITFK---FPM-SPLRRLSSGDNVLHGSYNPSELFLSSGAG--------LS 97
           IPPPRH+SDN+  +   FP+  P     S D++  GSYNPSE+ L++             
Sbjct: 57  IPPPRHLSDNLASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLATSPSGRIGDEELDM 116

Query: 96  SESNXXXXXXXXXXXXKVASSLPSGGFEMGA 4
           SE +            K+ASS P  G  M A
Sbjct: 117 SEDSFTSVPYRRSGSGKIASSFPGVGIYMAA 147