BLASTX nr result
ID: Coptis25_contig00016431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016431 (762 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|2... 294 1e-77 ref|NP_174575.1| 50S ribosomal protein L11 [Arabidopsis thaliana... 293 2e-77 ref|XP_002891023.1| hypothetical protein ARALYDRAFT_473481 [Arab... 292 5e-77 ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus... 291 8e-77 ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloro... 290 2e-76 >ref|XP_002298976.1| predicted protein [Populus trichocarpa] gi|222846234|gb|EEE83781.1| predicted protein [Populus trichocarpa] Length = 174 Score = 294 bits (753), Expect = 1e-77 Identities = 151/171 (88%), Positives = 157/171 (91%) Frame = +2 Query: 92 STPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIMAFCKD 271 ST R L V AMAPPK GK KKVIG+IKLALEAGKATPAPPVGPALGSKGVNIMAFCKD Sbjct: 4 STAPRRLSVIAMAPPKPGGKAKKVIGLIKLALEAGKATPAPPVGPALGSKGVNIMAFCKD 63 Query: 272 YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGTVT 451 YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPK+EKVG VT Sbjct: 64 YNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKMEKVGKVT 123 Query: 452 NDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK*VTV 604 DQ+RTIA EKLPDLNCT+IESAMRIIAGTAANMGI VDPP+LEPKK V + Sbjct: 124 IDQLRTIATEKLPDLNCTTIESAMRIIAGTAANMGIDVDPPILEPKKKVVL 174 >ref|NP_174575.1| 50S ribosomal protein L11 [Arabidopsis thaliana] gi|38605500|sp|Q9MAP3.1|RK11_ARATH RecName: Full=50S ribosomal protein L11, chloroplastic; AltName: Full=CL11; Flags: Precursor gi|6910575|gb|AAF31280.1|AC006424_9 Very similar to Spinacia oleracea 50S ribosomal p> [Arabidopsis thaliana] gi|11762194|gb|AAG40375.1|AF325023_1 At1g32990 [Arabidopsis thaliana] gi|13877983|gb|AAK44069.1|AF370254_1 putative ribosomal protein L11 [Arabidopsis thaliana] gi|15724330|gb|AAL06558.1|AF412105_1 At1g32990/F9L11_15 [Arabidopsis thaliana] gi|17104711|gb|AAL34244.1| putative ribosomal protein L11 [Arabidopsis thaliana] gi|21553791|gb|AAM62884.1| ribosomal protein L11, putative [Arabidopsis thaliana] gi|332193427|gb|AEE31548.1| 50S ribosomal protein L11 [Arabidopsis thaliana] Length = 222 Score = 293 bits (751), Expect = 2e-77 Identities = 147/177 (83%), Positives = 160/177 (90%) Frame = +2 Query: 62 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 241 FL +K S S+ R L V AMAPPK GK KKV+G+IKLALEAGKATPAPPVGPALGSK Sbjct: 41 FLGKKQSPLLSSTPRFLTVIAMAPPKPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSK 100 Query: 242 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 421 GVNIMAFCKDYNARTADKAGY+IPVEITV+DDKSFTFILKTPPASVLLLKAAGVEKGSKD Sbjct: 101 GVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVEKGSKD 160 Query: 422 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 592 P+ +KVG +T DQ+RTIAAEKLPDLNCT+IESAMRIIAGTAANMGI +DPP+LEPKK Sbjct: 161 PQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKK 217 >ref|XP_002891023.1| hypothetical protein ARALYDRAFT_473481 [Arabidopsis lyrata subsp. lyrata] gi|297336865|gb|EFH67282.1| hypothetical protein ARALYDRAFT_473481 [Arabidopsis lyrata subsp. lyrata] Length = 222 Score = 292 bits (748), Expect = 5e-77 Identities = 146/177 (82%), Positives = 160/177 (90%) Frame = +2 Query: 62 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 241 FL +K S S+ R L V AMAPPK GK KKV+G+IKLALEAGKATPAPPVGPALGSK Sbjct: 41 FLGKKQSPLLSSTPRFLTVIAMAPPKPGGKAKKVVGVIKLALEAGKATPAPPVGPALGSK 100 Query: 242 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 421 GVNIMAFCKDYNARTADKAGY+IPVEITV+DDKSFTFILKTPPASVLLLKAAGV+KGSKD Sbjct: 101 GVNIMAFCKDYNARTADKAGYIIPVEITVFDDKSFTFILKTPPASVLLLKAAGVDKGSKD 160 Query: 422 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 592 P+ +KVG +T DQ+RTIAAEKLPDLNCT+IESAMRIIAGTAANMGI +DPP+LEPKK Sbjct: 161 PQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKK 217 >ref|XP_002518942.1| 50S robosomal protein L11, putative [Ricinus communis] gi|223541929|gb|EEF43475.1| 50S robosomal protein L11, putative [Ricinus communis] Length = 221 Score = 291 bits (746), Expect = 8e-77 Identities = 145/172 (84%), Positives = 158/172 (91%) Frame = +2 Query: 77 HSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSKGVNIM 256 H + TPRR L V AMAPPK +GK KK +G+IKLALEAGKATPAPPVGPALG+KGVNIM Sbjct: 46 HHKTSQTPRRRLSVIAMAPPKPAGKAKKAVGLIKLALEAGKATPAPPVGPALGAKGVNIM 105 Query: 257 AFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKLEK 436 AFCKDYNA+TADKAGY+IPVEITVYDD+SFTFILKTPPASVLLLKAAGVEKGSKDP++EK Sbjct: 106 AFCKDYNAKTADKAGYIIPVEITVYDDRSFTFILKTPPASVLLLKAAGVEKGSKDPQIEK 165 Query: 437 VGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 592 VG VT +Q+R IAAEKLPDLNCTSIESAMRIIAGTAANMGI V+PPVLEPKK Sbjct: 166 VGKVTIEQLRAIAAEKLPDLNCTSIESAMRIIAGTAANMGIDVEPPVLEPKK 217 >ref|XP_002278388.1| PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Vitis vinifera] Length = 217 Score = 290 bits (742), Expect = 2e-76 Identities = 148/177 (83%), Positives = 156/177 (88%) Frame = +2 Query: 62 FLNQKHSSSFSTPRRTLVVKAMAPPKASGKTKKVIGMIKLALEAGKATPAPPVGPALGSK 241 FL K S+ R L V +MAPPK GK+KKV GMIKLALEAGKATPAPPVGPALGSK Sbjct: 37 FLPTKKCPFLSSTPRALTVISMAPPKPGGKSKKVTGMIKLALEAGKATPAPPVGPALGSK 96 Query: 242 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKD 421 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTF+LKTPPASVLLLKAAG EKG+KD Sbjct: 97 GVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFVLKTPPASVLLLKAAGAEKGAKD 156 Query: 422 PKLEKVGTVTNDQVRTIAAEKLPDLNCTSIESAMRIIAGTAANMGIVVDPPVLEPKK 592 PK EKVG +T +Q+RTIA EKLPDLNCTSIESAMRIIAGTAANMGI VDPPVLEPKK Sbjct: 157 PKQEKVGKITIEQLRTIATEKLPDLNCTSIESAMRIIAGTAANMGIEVDPPVLEPKK 213