BLASTX nr result

ID: Coptis25_contig00016418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016418
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235413.1| uncharacterized protein LOC100500255 precurs...   100   2e-19
ref|XP_002272163.1| PREDICTED: uncharacterized protein LOC100243...    98   8e-19
gb|AFK35837.1| unknown [Lotus japonicus]                               97   1e-18
ref|NP_001234955.1| uncharacterized protein LOC100527616 precurs...    97   1e-18
ref|XP_003596857.1| NAC domain protein [Medicago truncatula] gi|...    97   2e-18

>ref|NP_001235413.1| uncharacterized protein LOC100500255 precursor [Glycine max]
           gi|255629851|gb|ACU15276.1| unknown [Glycine max]
          Length = 108

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/108 (50%), Positives = 68/108 (62%)
 Frame = +2

Query: 65  MSRSXXXXXXXXXXXXTSQFEWKEQTVNEFEATPSVSNKQHLYSYRQEAVKEKILISQER 244
           MSR             TSQFEWK+Q V + ++ PSVS KQH  S   E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEK 60

Query: 245 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDKQKILED 388
           +I+RL ELVR L+EQLQQCRG N T  G V  L E     ++Q+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>ref|XP_002272163.1| PREDICTED: uncharacterized protein LOC100243239 [Vitis vinifera]
           gi|296084865|emb|CBI28274.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/108 (48%), Positives = 69/108 (63%)
 Frame = +2

Query: 65  MSRSXXXXXXXXXXXXTSQFEWKEQTVNEFEATPSVSNKQHLYSYRQEAVKEKILISQER 244
           MSR             TSQFEWK+Q V + + + S+S KQ   S R+EAVKEKI++SQE+
Sbjct: 1   MSRPMLLVFLLLILIITSQFEWKQQLVIDLDPSSSISQKQQQISQREEAVKEKIILSQEK 60

Query: 245 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDKQKILED 388
           +IQ L E++R L+EQL+QCR S  TR   V  L +N    ++QKILED
Sbjct: 61  NIQGLNEVIRSLQEQLKQCRNSKGTRNSSVSPLNDNVIELERQKILED 108


>gb|AFK35837.1| unknown [Lotus japonicus]
          Length = 108

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/108 (49%), Positives = 68/108 (62%)
 Frame = +2

Query: 65  MSRSXXXXXXXXXXXXTSQFEWKEQTVNEFEATPSVSNKQHLYSYRQEAVKEKILISQER 244
           MSR             TSQFEWK+  V + ++ P+VS KQ   S  +E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEK 60

Query: 245 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDKQKILED 388
           +I+RL ELVR L+EQLQQCRGSN T  G    LTE     ++Q+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGSNGTTNGTSSSLTERILELERQQILED 108


>ref|NP_001234955.1| uncharacterized protein LOC100527616 precursor [Glycine max]
           gi|255632782|gb|ACU16744.1| unknown [Glycine max]
          Length = 108

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 52/108 (48%), Positives = 68/108 (62%)
 Frame = +2

Query: 65  MSRSXXXXXXXXXXXXTSQFEWKEQTVNEFEATPSVSNKQHLYSYRQEAVKEKILISQER 244
           MSR             TSQFEWK+Q V + ++ P++  KQH  S  +E VKEKI++ QE+
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 245 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDKQKILED 388
           +I+RL ELVR L+EQLQQCRG N T  G V  L E     ++Q+ILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>ref|XP_003596857.1| NAC domain protein [Medicago truncatula]
           gi|355485905|gb|AES67108.1| NAC domain protein [Medicago
           truncatula]
          Length = 589

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/108 (49%), Positives = 69/108 (63%)
 Frame = +2

Query: 65  MSRSXXXXXXXXXXXXTSQFEWKEQTVNEFEATPSVSNKQHLYSYRQEAVKEKILISQER 244
           MSR             TSQFEWK+  V++ E+  SV+ KQH  S  +E VKEKI++ QE+
Sbjct: 482 MSRPMLLVFLLIILIITSQFEWKQPLVSDVESNSSVTQKQHRISNAEETVKEKIILVQEK 541

Query: 245 DIQRLIELVRGLREQLQQCRGSNDTRKGVVKQLTENGNGHDKQKILED 388
           +I+RL ELVR L+EQLQQC+GSN T    V  LTE     ++Q+ILED
Sbjct: 542 NIRRLNELVRHLQEQLQQCKGSNGTINSTVGPLTERILELERQQILED 589


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