BLASTX nr result
ID: Coptis25_contig00016417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016417 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi... 211 5e-53 ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [... 207 7e-52 emb|CAN62050.1| hypothetical protein VITISV_016640 [Vitis vinifera] 207 9e-52 ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2... 206 2e-51 ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2... 200 9e-50 >ref|XP_002533224.1| wd40 protein, putative [Ricinus communis] gi|223526967|gb|EEF29164.1| wd40 protein, putative [Ricinus communis] Length = 807 Score = 211 bits (537), Expect = 5e-53 Identities = 98/132 (74%), Positives = 113/132 (85%) Frame = +3 Query: 3 ILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVREGDDADSCTTWHWHPSEVKSL*FSSD 182 ILIWR FGNR F + + G + N+EERPGVR DDA+SCTTWHWHPSEV L FSSD Sbjct: 230 ILIWRGFGNRSFGVNDILMSGISMNNDEERPGVRGDDDAESCTTWHWHPSEVNVLSFSSD 289 Query: 183 GAYLYSGGKEGVFVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCANNRIHLLKMP 362 GAYLYSGGKEGV VVWQL+TGKKKFLPRIG+PLLY+T+S DPSLSS+SCA+N+IH+LKMP Sbjct: 290 GAYLYSGGKEGVLVVWQLDTGKKKFLPRIGSPLLYYTDSTDPSLSSISCADNQIHILKMP 349 Query: 363 SMEIIKSISGIE 398 SM I+KSISGI+ Sbjct: 350 SMGILKSISGIK 361 >ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera] gi|296087114|emb|CBI33488.3| unnamed protein product [Vitis vinifera] Length = 815 Score = 207 bits (527), Expect = 7e-52 Identities = 99/132 (75%), Positives = 109/132 (82%) Frame = +3 Query: 3 ILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVREGDDADSCTTWHWHPSEVKSL*FSSD 182 ILIWR FG R FS GR + NE+ERPGVR DDADSC TWHWH +EVK L FSSD Sbjct: 232 ILIWRSFGRRTFSMGDGLMNGRAMNNEDERPGVRGDDDADSCATWHWHSAEVKVLSFSSD 291 Query: 183 GAYLYSGGKEGVFVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCANNRIHLLKMP 362 GAYL+SGGKEGV V WQL+TGKKKFLPRIG+PLLYF S DPSLSSVSC++NRIHLLKMP Sbjct: 292 GAYLFSGGKEGVLVFWQLDTGKKKFLPRIGSPLLYFATSLDPSLSSVSCSDNRIHLLKMP 351 Query: 363 SMEIIKSISGIE 398 SMEI+KSISGI+ Sbjct: 352 SMEILKSISGIK 363 >emb|CAN62050.1| hypothetical protein VITISV_016640 [Vitis vinifera] Length = 457 Score = 207 bits (526), Expect = 9e-52 Identities = 99/132 (75%), Positives = 109/132 (82%) Frame = +3 Query: 3 ILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVREGDDADSCTTWHWHPSEVKSL*FSSD 182 ILIWR FG R FS GR + NE+ERPGVR DDADSC TWHWH +EVK L FSSD Sbjct: 244 ILIWRSFGXRTFSMGDGLMNGRAMNNEDERPGVRGDDDADSCATWHWHSAEVKVLSFSSD 303 Query: 183 GAYLYSGGKEGVFVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCANNRIHLLKMP 362 GAYL+SGGKEGV V WQL+TGKKKFLPRIG+PLLYF S DPSLSSVSCA+NRIHLLKMP Sbjct: 304 GAYLFSGGKEGVLVFWQLDTGKKKFLPRIGSPLLYFXTSLDPSLSSVSCADNRIHLLKMP 363 Query: 363 SMEIIKSISGIE 398 SMEI+KS+SGI+ Sbjct: 364 SMEILKSLSGIK 375 >ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1| predicted protein [Populus trichocarpa] Length = 812 Score = 206 bits (524), Expect = 2e-51 Identities = 99/133 (74%), Positives = 116/133 (87%), Gaps = 1/133 (0%) Frame = +3 Query: 3 ILIWRDFGNREFS-GSGVTKKGRVLKNEEERPGVREGDDADSCTTWHWHPSEVKSL*FSS 179 ILIWR FG+R F+ G G+ + ++ NEEERPGVR DDADSCTTWHWH +EV L FSS Sbjct: 234 ILIWRGFGDRTFADGDGLVSR-KLTNNEEERPGVRGDDDADSCTTWHWHSAEVNVLFFSS 292 Query: 180 DGAYLYSGGKEGVFVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCANNRIHLLKM 359 DGAYLYSGGKEGV VVWQL+TG+KKFLPRIG+PLL+FT+S DPSLSS+SCA+N+IHLLKM Sbjct: 293 DGAYLYSGGKEGVLVVWQLDTGRKKFLPRIGSPLLWFTDSPDPSLSSISCADNQIHLLKM 352 Query: 360 PSMEIIKSISGIE 398 PSMEI+KSISGI+ Sbjct: 353 PSMEILKSISGIK 365 >ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1| predicted protein [Populus trichocarpa] Length = 811 Score = 200 bits (509), Expect = 9e-50 Identities = 98/132 (74%), Positives = 108/132 (81%) Frame = +3 Query: 3 ILIWRDFGNREFSGSGVTKKGRVLKNEEERPGVREGDDADSCTTWHWHPSEVKSL*FSSD 182 ILIWR FG+R F R + N EERPGVR DDADSCTTWHWH +EV L FS D Sbjct: 234 ILIWRGFGDRTFVDDDRLVGVRSMNNGEERPGVRGDDDADSCTTWHWHSAEVNVLFFSLD 293 Query: 183 GAYLYSGGKEGVFVVWQLETGKKKFLPRIGAPLLYFTESQDPSLSSVSCANNRIHLLKMP 362 GAYLYSGGKEGV VVWQL+TGKKKFLPRIG+PLL+FT S DPSLSSVSCA+N+IHLLKMP Sbjct: 294 GAYLYSGGKEGVLVVWQLDTGKKKFLPRIGSPLLWFTNSPDPSLSSVSCADNQIHLLKMP 353 Query: 363 SMEIIKSISGIE 398 SMEI+KSISGI+ Sbjct: 354 SMEILKSISGIK 365