BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016413
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   481   e-133
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   480   e-133
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   431   e-118
gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]         426   e-117

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
            [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
            protein product [Vitis vinifera]
          Length = 503

 Score =  481 bits (1239), Expect = e-133
 Identities = 228/338 (67%), Positives = 281/338 (83%)
 Frame = -3

Query: 1114 LKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMPDHGCMADSYTYG 935
            LK+A +F++YM+EMG+P S   +N+LIKA C N GTMD+ALR+FREMP+ GC  DSYTYG
Sbjct: 136  LKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYG 195

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
            TLI+G+C+ GKI EAK+LF+EMETK CSPTVVTYTSLIHG C SK LD A++L  EM+SK
Sbjct: 196  TLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASK 255

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGV 575
            GI+PNV T+SSLMDG CK G  S A+ LL+ M+ +RHLPN+ITYSTLVHGLCKEG LQ  
Sbjct: 256  GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315

Query: 574  VEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKI 395
            VE+LDRMKLQ L+PDAGLYGK+++G C++ KF +AANFLDEMVLGGISPN +T +LHV+I
Sbjct: 316  VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375

Query: 394  NNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMV 215
            +N+V+QGLC+E+  NRAFQ+YLS RTRGIS+ AK+F SLV  FC KGD+HKA  +V EMV
Sbjct: 376  HNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMV 434

Query: 214  LDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGE 101
            LDGC+PDE TWNA V  FW R+K R++A+L+Q ELM E
Sbjct: 435  LDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVE 472



 Score =  110 bits (274), Expect = 8e-22
 Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 4/279 (1%)
 Frame = -3

Query: 910 FGKINEAKD---LFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSKGIEPN 740
           +G++++  D   +F++M+   C P+  +Y ++        +L  A++ +  M   GI P+
Sbjct: 95  YGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPS 154

Query: 739 VVTFSSLMDGLCK-VGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGVVEVL 563
           V + + L+  LCK  G    A+ +  +M  +   P+  TY TL++GLC+ G +    E+ 
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELF 214

Query: 562 DRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKINNLV 383
             M+ +   P    Y  L+ GLC+      A   L+EM   GI PN  T +        +
Sbjct: 215 KEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSS-------L 267

Query: 382 IQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMVLDGC 203
           + G C     +RA ++     +R    +  ++S+LV   CK+G + +A  I+  M L G 
Sbjct: 268 MDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL 327

Query: 202 VPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 86
            PD   +   + GF    K  +AA+ L   ++G  + ++
Sbjct: 328 RPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNR 366



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 4/332 (1%)
 Frame = -3

Query: 1105 AKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMP---DHGCMADSYTYG 935
            +K   K+ K++G  +  +    LIKA    E  +  A+ +F        +G      T+ 
Sbjct: 3    SKTVIKWSKQIGSAQVAQ----LIKA----ERDIQKAIVIFDSATAEYTNGFRHSHQTFS 54

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
             +IS +        A++L   M+ + C+ T   + S+   +    K  +A+++F +M   
Sbjct: 55   LMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEY 114

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCK-EGNLQG 578
              EP+  ++ ++   L    Q   A+     M      P+V + + L+  LCK  G +  
Sbjct: 115  ECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDA 174

Query: 577  VVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVK 398
             + +   M  +   PD+  YG L+ GLC L K  +A     EM     SP  VT      
Sbjct: 175  ALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTY----- 229

Query: 397  INNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEM 218
                +I GLC   DL+ A ++     ++GI  +  ++SSL+   CK G   +A  ++  M
Sbjct: 230  --TSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM 287

Query: 217  VLDGCVPDEDTWNAAVGGFWCRKKARDAADLL 122
            V    +P+  T++  V G     K ++A ++L
Sbjct: 288  VSRRHLPNMITYSTLVHGLCKEGKLQEAVEIL 319


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  480 bits (1235), Expect = e-133
 Identities = 227/339 (66%), Positives = 279/339 (82%)
 Frame = -3

Query: 1114 LKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMPDHGCMADSYTYG 935
            LK+A +F++YM+EMG+P S   +N+LIKA C N GTMD+ALR+FREMP+ GC   SYTYG
Sbjct: 136  LKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYG 195

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
            TLI G+C+ GKI EAK+LF+EMETK CSPTVVTY SLIHG C SK LD A++L  EM+SK
Sbjct: 196  TLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASK 255

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGV 575
            GI+PNV T+SSLMDG CK G  S A+ LL+ M+ +RHLPN+ITYSTLVHGLCKEG LQ  
Sbjct: 256  GIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEA 315

Query: 574  VEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKI 395
            VE+LDRMKLQ L+PDAGLYGK+++G C++ KF +AANFLDEMVLGGISPN +T +LHV+I
Sbjct: 316  VEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRI 375

Query: 394  NNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMV 215
            +N+V+QGLC+E+  NRAFQ+YLS RTRGIS+ AK+F SLV  FC KGD+HKA  +V EMV
Sbjct: 376  HNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMV 434

Query: 214  LDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEF 98
            LDGC+PDE TWNA V  FW R+K R++A+L+Q ELMG F
Sbjct: 435  LDGCIPDEXTWNAVVCAFWDRRKVRESAELVQVELMGTF 473



 Score =  109 bits (273), Expect = 1e-21
 Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 4/279 (1%)
 Frame = -3

Query: 910 FGKINEAKD---LFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSKGIEPN 740
           +G++++  D   +F++M+   C P+  +Y ++        +L  A++ +  M   GI P+
Sbjct: 95  YGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPS 154

Query: 739 VVTFSSLMDGLCK-VGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGVVEVL 563
           V + + L+  LCK  G    A+ +  +M  +   P+  TY TL+ GLC+ G +    E+ 
Sbjct: 155 VASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELF 214

Query: 562 DRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKINNLV 383
             M+ +   P    Y  L+ GLC+      A   L+EM   GI PN  T +        +
Sbjct: 215 KEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSS-------L 267

Query: 382 IQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMVLDGC 203
           + G C     +RA ++     +R    +  ++S+LV   CK+G + +A  I+  M L G 
Sbjct: 268 MDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGL 327

Query: 202 VPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 86
            PD   +   + GF    K  +AA+ L   ++G  + ++
Sbjct: 328 RPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNR 366



 Score = 95.1 bits (235), Expect = 3e-17
 Identities = 80/332 (24%), Positives = 144/332 (43%), Gaps = 4/332 (1%)
 Frame = -3

Query: 1105 AKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMP---DHGCMADSYTYG 935
            +K   K+ K++G  +  +    LIKA    E  +  A+ +F        +G      T+ 
Sbjct: 3    SKTVIKWSKQIGSAQVAQ----LIKA----ERDIQKAIVIFDSATAEYTNGFRHSHQTFS 54

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
             +IS +        A++L   M+ + C+ T   + S+   +    K  +A+++F +M   
Sbjct: 55   LMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEY 114

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCK-EGNLQG 578
              EP+  ++ ++   L    Q   A+     M      P+V + + L+  LCK  G +  
Sbjct: 115  ECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDA 174

Query: 577  VVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVK 398
             + +   M  +   P +  YG L+ GLC L K  +A     EM     SP  VT      
Sbjct: 175  ALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTY----- 229

Query: 397  INNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEM 218
                +I GLC   DL+ A ++     ++GI  +  ++SSL+   CK G   +A  ++  M
Sbjct: 230  --XSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMM 287

Query: 217  VLDGCVPDEDTWNAAVGGFWCRKKARDAADLL 122
            V    +P+  T++  V G     K ++A ++L
Sbjct: 288  VSRRHLPNMITYSTLVHGLCKEGKLQEAVEIL 319


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  459 bits (1182), Expect = e-127
 Identities = 217/339 (64%), Positives = 266/339 (78%)
 Frame = -3

Query: 1114 LKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMPDHGCMADSYTYG 935
            LK+A  F+KYM+EMGV +S   +N+LIKA C N GT+D+A  +FREMP  GC  DSYTYG
Sbjct: 136  LKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYG 195

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
            TLI+G+CK GK  EAK+LF+EM+TKGCSP+VVTY+ L+HG C +  +DEAM LF +M  K
Sbjct: 196  TLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK 255

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGV 575
             IEPNV T+SSLMDGLCK G   EA+ LLE M+ KRH PN++TYSTL++GLCKEG L   
Sbjct: 256  AIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315

Query: 574  VEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKI 395
            VE LDRMKLQ LKPDAGLYGK++ G C + KFQ+AA +LDEMVLG ISPN VT +LHVK+
Sbjct: 316  VETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKL 375

Query: 394  NNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMV 215
            NN+V+QGLC+  +LNR+FQ+Y+  RTRGIS+ A +F SLV CFCKKGD+HKA RI  EMV
Sbjct: 376  NNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMV 435

Query: 214  LDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEF 98
            LDGCVPD   W+A VGGFW R+K R+A + +  ELM EF
Sbjct: 436  LDGCVPDHGIWSAVVGGFWDRRKVREAFESIVVELMNEF 474



 Score =  137 bits (346), Expect = 4e-30
 Identities = 92/344 (26%), Positives = 159/344 (46%), Gaps = 4/344 (1%)
 Frame = -3

Query: 1105 AKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMD---SALRVFREMPDHGCMADSYTYG 935
            A++    MKE       RI   +  + C   G +     A+RVF +M D GC     +Y 
Sbjct: 69   AEEMLNRMKE----EKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYI 124

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCI-SKKLDEAMKLFGEMSS 758
            ++ + + +  ++  A   ++ M   G   +VV+   LI   C  S  +D A ++F EM  
Sbjct: 125  SVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPK 184

Query: 757  KGIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQG 578
            +G +P+  T+ +L++GLCK+G+  EA  L ++M  K   P+V+TYS L+HGLC+ GN+  
Sbjct: 185  RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDE 244

Query: 577  VVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVK 398
             + + D+MK + ++P+   Y  L+ GLC+     +A   L+ MV     PN VT      
Sbjct: 245  AMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVT------ 298

Query: 397  INNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEM 218
                                                +S+L+   CK+G + +A   +  M
Sbjct: 299  ------------------------------------YSTLINGLCKEGKLAEAVETLDRM 322

Query: 217  VLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 86
             L G  PD   +   + GF   +K ++AA  L   ++G+ + ++
Sbjct: 323  KLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNR 366


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100-like
            [Glycine max]
          Length = 479

 Score =  431 bits (1108), Expect = e-118
 Identities = 205/343 (59%), Positives = 263/343 (76%)
 Frame = -3

Query: 1114 LKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMPDHGCMADSYTYG 935
            +K A  F++ M+E+G+P S   +NILIKA C N+ T+DSALR+F+EMP+ GC  DSYTYG
Sbjct: 136  VKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYG 195

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
            TLI+G+C+ G I+EAK+LF+EME KG S +VVTYTSLIHG C S  LDEA+ L  EM   
Sbjct: 196  TLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRN 255

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGV 575
             IEPNV T+SSLMDGLCK G  S+A+ LLE M  K HLPN++TYSTL++GLCKE  L+  
Sbjct: 256  DIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREA 315

Query: 574  VEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKI 395
            VE+LDRM++Q LKP+AGLYGK+++GLC    +Q+AANF+DEMVLGGISPN  + +LHV++
Sbjct: 316  VEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRM 375

Query: 394  NNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMV 215
            +N+V+QGLC+  D  RAFQ+YLS RTR ISV   +F  LV CFCK+GD+HKA RI+ EMV
Sbjct: 376  HNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMV 435

Query: 214  LDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 86
            LDGC+PDE  WN  +GG W RKK R+A + L  EL  +F  ++
Sbjct: 436  LDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQKFVEAE 478



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 57/271 (21%), Positives = 116/271 (42%), Gaps = 4/271 (1%)
 Frame = -3

Query: 850 PTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK---GIEPNVVTFSSLMDGLCKVGQCSEA 680
           P  +T + ++      K + +A+ +F   +++   G   +  TF  ++  L  V Q   A
Sbjct: 10  PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69

Query: 679 IGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTG 500
            G+LE+M  ++ +     + ++  G  +       + V  +M+   L+P    Y  ++  
Sbjct: 70  EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129

Query: 499 LCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKINNLVIQGLCSEND-LNRAFQVYLST 323
           L E +  + A  F  EM   GI  + V+L       N++I+ LC   + ++ A +++   
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSL-------NILIKALCKNKETVDSALRIFQEM 182

Query: 322 RTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMVLDGCVPDEDTWNAAVGGFWCRKKA 143
             RG    + ++ +L+   C+ G++ +A  +  EM   G      T+ + + G  C+   
Sbjct: 183 PNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGL-CQSNN 241

Query: 142 RDAADLLQTELMGEFATSKCSN*ISVLDGSC 50
            D A  L  E+             S++DG C
Sbjct: 242 LDEAIGLLEEMKRNDIEPNVFTYSSLMDGLC 272


>gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  426 bits (1096), Expect = e-117
 Identities = 202/343 (58%), Positives = 261/343 (76%)
 Frame = -3

Query: 1114 LKMAKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVFREMPDHGCMADSYTYG 935
            +K A  F+K M+E G+P +   +NILIKA C NE T++SA R+FREMP+ GC  DSYTYG
Sbjct: 136  VKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYG 195

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
            TLI+G+CK GKI++AK+L  EME KG SP+VV+YTSLIHG C S  LDEA++L  EM   
Sbjct: 196  TLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN 255

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCKEGNLQGV 575
            GIEPNV T+SSLMDGLCK G  S+A+ LLE M+ +R LPN++TYSTL++GLCKEG  +  
Sbjct: 256  GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREA 315

Query: 574  VEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVKI 395
            VE+LDRM+LQ LKPDAG+YG++++GLC    +Q+AANF+DEM LGGISPN  +   HVK+
Sbjct: 316  VEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKM 375

Query: 394  NNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEMV 215
            +N+V+QGLC+  D  RAFQ+YLS RTRGISV   +F  LV CFCK+GD++KA RI+ EM+
Sbjct: 376  HNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMI 435

Query: 214  LDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFATSK 86
            LDGC+PDE  WN  + G W RKK R+  +LL  EL  +F  ++
Sbjct: 436  LDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFVEAE 478



 Score =  126 bits (316), Expect = 1e-26
 Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
 Frame = -3

Query: 988 VFREMPDHGCMADSYTYGTLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFC 809
           +   M    C      + T+  G  +  +  +A  +F +ME     PT  +Y ++     
Sbjct: 72  MLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILV 131

Query: 808 ISKKLDEAMKLFGEMSSKGIEPNVVTFSSLMDGLCKVGQCSE-AIGLLEKMIIKRHLPNV 632
               +  A+  + EM  KGI P VV+ + L+  LCK  +  E A  L  +M  +   P+ 
Sbjct: 132 EENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDS 191

Query: 631 ITYSTLVHGLCKEGNLQGVVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDE 452
            TY TL++GLCK G +    E+LD M+ + L P    Y  L+ GLC+ +   +A   L+E
Sbjct: 192 YTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEE 251

Query: 451 MVLGGISPNYVTLNLHVKINNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVA 272
           M++ GI PN  T +        ++ GLC     ++A ++      R +  +  ++S+L+ 
Sbjct: 252 MIINGIEPNVFTYSS-------LMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLIN 304

Query: 271 CFCKKGDVHKAFRIVSEMVLDGCVPDEDTWNAAVGGFWCRKKARDAADLLQTELMGEFAT 92
             CK+G   +A  I+  M L G  PD   +   + G       ++AA+ +    +G  + 
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISP 364

Query: 91  SKCS 80
           ++ S
Sbjct: 365 NRAS 368



 Score =  124 bits (311), Expect = 4e-26
 Identities = 84/332 (25%), Positives = 156/332 (46%), Gaps = 4/332 (1%)
 Frame = -3

Query: 1105 AKKFFKYMKEMGVPRSTRIINILIKAFCMNEGTMDSALRVF---REMPDHGCMADSYTYG 935
            +K  FK+ K+        I N L++     E  ++  L +F    E   +G   D  T+G
Sbjct: 3    SKTLFKWPKQ--------ITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFG 54

Query: 934  TLISGMCKFGKINEAKDLFQEMETKGCSPTVVTYTSLIHGFCISKKLDEAMKLFGEMSSK 755
             +I  +    +   A+ + + M+ + C  T   + ++  G+    +  +A+++F +M   
Sbjct: 55   AMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDF 114

Query: 754  GIEPNVVTFSSLMDGLCKVGQCSEAIGLLEKMIIKRHLPNVITYSTLVHGLCK-EGNLQG 578
             ++P   ++ ++ D L +      AIG  ++M  K   P V++ + L+  LCK E  ++ 
Sbjct: 115  QVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVES 174

Query: 577  VVEVLDRMKLQDLKPDAGLYGKLVTGLCELSKFQDAANFLDEMVLGGISPNYVTLNLHVK 398
               +   M  +  +PD+  YG L+ GLC+L K   A   LDEM   G+SP+ V+      
Sbjct: 175  AFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSY----- 229

Query: 397  INNLVIQGLCSENDLNRAFQVYLSTRTRGISVSAKSFSSLVACFCKKGDVHKAFRIVSEM 218
                +I GLC  N+L+ A ++       GI  +  ++SSL+   CK G   +A  ++  M
Sbjct: 230  --TSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVM 287

Query: 217  VLDGCVPDEDTWNAAVGGFWCRKKARDAADLL 122
            V    +P+  T++  + G     K R+A ++L
Sbjct: 288  VRRRLLPNMVTYSTLINGLCKEGKHREAVEIL 319