BLASTX nr result

ID: Coptis25_contig00016407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016407
         (985 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882782.1| hypothetical protein ARALYDRAFT_478618 [Arab...   270   3e-70
ref|XP_002264026.1| PREDICTED: nudix hydrolase 16, mitochondrial...   267   3e-69
ref|XP_003542815.1| PREDICTED: nudix hydrolase 16, mitochondrial...   264   3e-68
ref|NP_566428.1| nudix hydrolase 16 [Arabidopsis thaliana] gi|68...   263   4e-68
ref|XP_003627895.1| Nudix hydrolase [Medicago truncatula] gi|355...   261   2e-67

>ref|XP_002882782.1| hypothetical protein ARALYDRAFT_478618 [Arabidopsis lyrata subsp.
           lyrata] gi|297328622|gb|EFH59041.1| hypothetical protein
           ARALYDRAFT_478618 [Arabidopsis lyrata subsp. lyrata]
          Length = 180

 Score =  270 bits (691), Expect = 3e-70
 Identities = 124/174 (71%), Positives = 147/174 (84%)
 Frame = +3

Query: 243 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 422
           M DLVARTGRL QRYEDG RLVAGCIPF+Y +S ++   ++ + +QVLMI+S+SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYINSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 423 PKGGWENDETVEQAATREAIEEAGVRGEIMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 602
           PKGGWENDETV +AA REA+EEAGVRG +MD LG Y FKSKTHQDEFSPEGLC+AAM+ L
Sbjct: 61  PKGGWENDETVREAAVREAVEEAGVRGILMDFLGNYEFKSKTHQDEFSPEGLCKAAMYAL 120

Query: 603 FVKEELNSWPEQNTRQRRWLTIPEAAENCRHAWMREVLEEGFCKWHEEKLSAGK 764
           +VKEEL +WPE  TR R+WLTI EA ENCRHAWM++ L EGFCKWH+EK+  G+
Sbjct: 121 YVKEELETWPEHETRTRKWLTIEEAVENCRHAWMKDALVEGFCKWHKEKMDKGE 174


>ref|XP_002264026.1| PREDICTED: nudix hydrolase 16, mitochondrial [Vitis vinifera]
           gi|296087852|emb|CBI35108.3| unnamed protein product
           [Vitis vinifera]
          Length = 180

 Score =  267 bits (683), Expect = 3e-69
 Identities = 127/174 (72%), Positives = 144/174 (82%)
 Frame = +3

Query: 243 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 422
           MS LVARTGR  QRYE G RL+AGCIPFK+R+  E     +++ ++VLMINS SGPGLLF
Sbjct: 1   MSGLVARTGRHQQRYEAGCRLIAGCIPFKHRNPDEGSNENSEKVVEVLMINSPSGPGLLF 60

Query: 423 PKGGWENDETVEQAATREAIEEAGVRGEIMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 602
           PKGGWENDETVE+AA REAIEEAGVRG +M+ LG Y FKSKT QDEFSPEG C+AAMF L
Sbjct: 61  PKGGWENDETVEEAAIREAIEEAGVRGVLMEFLGHYHFKSKTLQDEFSPEGSCKAAMFAL 120

Query: 603 FVKEELNSWPEQNTRQRRWLTIPEAAENCRHAWMREVLEEGFCKWHEEKLSAGK 764
           FVKEEL SWPEQNTR+R WLTIPEA ENCRH WMRE L++GF KWHE K+S G+
Sbjct: 121 FVKEELESWPEQNTRRRSWLTIPEAYENCRHPWMREALKDGFSKWHENKISTGE 174


>ref|XP_003542815.1| PREDICTED: nudix hydrolase 16, mitochondrial-like [Glycine max]
          Length = 175

 Score =  264 bits (674), Expect = 3e-68
 Identities = 126/175 (72%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
 Frame = +3

Query: 243 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNL-QVLMINSTSGPGLL 419
           MS+LVARTGR  QRYE+GYRLV+GC+PF+Y+ S + CG  + + + +VLMINS SGPGLL
Sbjct: 1   MSELVARTGRHQQRYENGYRLVSGCVPFRYKSSND-CGDSSSEKIVEVLMINSPSGPGLL 59

Query: 420 FPKGGWENDETVEQAATREAIEEAGVRGEIMDCLGRYRFKSKTHQDEFSPEGLCEAAMFP 599
           FPKGGWENDETVEQAA REA+EEAGVRG+IMD LG Y F+SKTHQDEFSPEGLC+AAMF 
Sbjct: 60  FPKGGWENDETVEQAAVREAVEEAGVRGDIMDFLGYYEFRSKTHQDEFSPEGLCKAAMFA 119

Query: 600 LFVKEELNSWPEQNTRQRRWLTIPEAAENCRHAWMREVLEEGFCKWHEEKLSAGK 764
           LFVKEEL  WPEQ+TR RRWL + EA E+ RHAWMR+ L E FCKWHE+KL  G+
Sbjct: 120 LFVKEELELWPEQSTRNRRWLAVSEALESLRHAWMRDAL-ECFCKWHEDKLVNGR 173


>ref|NP_566428.1| nudix hydrolase 16 [Arabidopsis thaliana]
           gi|68565942|sp|Q9LHK1.1|NUD16_ARATH RecName: Full=Nudix
           hydrolase 16, mitochondrial; Short=AtNUDT16; Flags:
           Precursor gi|11762150|gb|AAG40353.1|AF325001_1 AT3g12600
           [Arabidopsis thaliana]
           gi|12321963|gb|AAG51020.1|AC069474_19 unknown protein;
           22985-21799 [Arabidopsis thaliana]
           gi|13926332|gb|AAK49630.1|AF372914_1 AT3g12600/T2E22_108
           [Arabidopsis thaliana] gi|9294354|dbj|BAB02251.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|27363312|gb|AAO11575.1| At3g12600/T2E22_108
           [Arabidopsis thaliana] gi|332641700|gb|AEE75221.1| nudix
           hydrolase 16 [Arabidopsis thaliana]
          Length = 180

 Score =  263 bits (673), Expect = 4e-68
 Identities = 121/174 (69%), Positives = 146/174 (83%)
 Frame = +3

Query: 243 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 422
           M DLVARTGRL QRYEDG RLVAGCIPF+Y +S ++   ++ + +QVLMI+S+SGPGLLF
Sbjct: 1   MCDLVARTGRLQQRYEDGSRLVAGCIPFRYVNSDKDGNSESGKVIQVLMISSSSGPGLLF 60

Query: 423 PKGGWENDETVEQAATREAIEEAGVRGEIMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 602
           PKGGWENDETV +AA REA+EEAGVRG +MD LG Y FKSK+HQDEFSPEGLC+AAM+ L
Sbjct: 61  PKGGWENDETVREAAAREAVEEAGVRGILMDFLGNYEFKSKSHQDEFSPEGLCKAAMYAL 120

Query: 603 FVKEELNSWPEQNTRQRRWLTIPEAAENCRHAWMREVLEEGFCKWHEEKLSAGK 764
           +VKEEL +WPE  TR R+WLTI EA E+CRH WM++ L EGFCKWH+EK+  G+
Sbjct: 121 YVKEELATWPEHETRTRKWLTIEEAVESCRHPWMKDALVEGFCKWHKEKMVKGE 174


>ref|XP_003627895.1| Nudix hydrolase [Medicago truncatula] gi|355521917|gb|AET02371.1|
           Nudix hydrolase [Medicago truncatula]
           gi|388494930|gb|AFK35531.1| unknown [Medicago
           truncatula]
          Length = 175

 Score =  261 bits (667), Expect = 2e-67
 Identities = 123/173 (71%), Positives = 143/173 (82%)
 Frame = +3

Query: 243 MSDLVARTGRLHQRYEDGYRLVAGCIPFKYRDSGENCGGKTKQNLQVLMINSTSGPGLLF 422
           MSDLVARTGR  QRYEDGYRLVAGC+PF+Y+   +     +++ ++VLMINS SGPGLLF
Sbjct: 1   MSDLVARTGRHQQRYEDGYRLVAGCVPFRYKSCDDE--SSSEKIVEVLMINSPSGPGLLF 58

Query: 423 PKGGWENDETVEQAATREAIEEAGVRGEIMDCLGRYRFKSKTHQDEFSPEGLCEAAMFPL 602
           PKGGWENDETVE+AA REAIEEAGVRG++M+CLG Y F+SKTHQDEFSPEGLC+AAMF L
Sbjct: 59  PKGGWENDETVEEAAVREAIEEAGVRGDLMECLGYYEFRSKTHQDEFSPEGLCKAAMFAL 118

Query: 603 FVKEELNSWPEQNTRQRRWLTIPEAAENCRHAWMREVLEEGFCKWHEEKLSAG 761
           FVKEEL+ WPEQNTR R WL + EA ++ RH WMR+ LE  FCKWHEEK   G
Sbjct: 119 FVKEELDLWPEQNTRNRSWLDVSEALDSLRHEWMRDALER-FCKWHEEKFVDG 170


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