BLASTX nr result
ID: Coptis25_contig00016403
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016403 (564 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog ... 65 1e-08 ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog ... 64 2e-08 dbj|BAK02836.1| predicted protein [Hordeum vulgare subsp. vulgare] 63 4e-08 ref|XP_002511033.1| conserved hypothetical protein [Ricinus comm... 63 4e-08 >ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog [Brachypodium distachyon] Length = 275 Score = 64.7 bits (156), Expect = 1e-08 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 3/50 (6%) Frame = -2 Query: 143 HKEESTRLPPPPIDLLTPQNSLE---IGTGSRVRSFPHVDGNYALHVSIP 3 ++E S LPPPP+DLL P N ++ + GSR+RSFPHV+GNYALHV IP Sbjct: 24 NQEASALLPPPPLDLLQPPNFVDYSKMAQGSRIRSFPHVEGNYALHVYIP 73 >ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|222869314|gb|EEF06445.1| predicted protein [Populus trichocarpa] Length = 290 Score = 63.5 bits (153), Expect = 2e-08 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 6/58 (10%) Frame = -2 Query: 158 PTDPNHKEESTRLPPPPIDLLTPQNSLEI------GTGSRVRSFPHVDGNYALHVSIP 3 P N K E+ LPPPP+ LLTP N L G SR+RSFPHV GNYALHV IP Sbjct: 29 PPVSNPKAEAIALPPPPLALLTPPNPLGALDSMLNGQSSRIRSFPHVQGNYALHVYIP 86 >ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog [Vitis vinifera] gi|147791224|emb|CAN70131.1| hypothetical protein VITISV_030399 [Vitis vinifera] gi|297737378|emb|CBI26579.3| unnamed protein product [Vitis vinifera] Length = 283 Score = 63.5 bits (153), Expect = 2e-08 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 6/59 (10%) Frame = -2 Query: 161 QPTDPNHKEESTRLPPPPIDLLTPQNSL------EIGTGSRVRSFPHVDGNYALHVSIP 3 +PT+ NH + S LPPPP+ LL+P NSL + RVRSFPHV+GNYALHV IP Sbjct: 23 RPTNENH-QASGPLPPPPLALLSPPNSLGELNYSQTAQSGRVRSFPHVEGNYALHVFIP 80 >dbj|BAK02836.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 283 Score = 62.8 bits (151), Expect = 4e-08 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 3/49 (6%) Frame = -2 Query: 140 KEESTRLPPPPIDLLTPQNSLEIGT---GSRVRSFPHVDGNYALHVSIP 3 +E S LPPPP+DLL N ++ T GSR+RSFPHV+GNYALHV IP Sbjct: 33 QEASALLPPPPLDLLQSPNFVDYSTIPQGSRIRSFPHVEGNYALHVYIP 81 >ref|XP_002511033.1| conserved hypothetical protein [Ricinus communis] gi|223550148|gb|EEF51635.1| conserved hypothetical protein [Ricinus communis] Length = 288 Score = 62.8 bits (151), Expect = 4e-08 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%) Frame = -2 Query: 155 TDPNHKEESTRLPPPPIDLLTPQNSLEI---GTGSRVRSFPHVDGNYALHVSIP 3 T N K E T LPPPP+ LL P NS++ G SR+RSF HV+GNYALHV IP Sbjct: 31 TISNTKPEITPLPPPPVSLLIPPNSIDYFQAGQPSRMRSFAHVEGNYALHVYIP 84