BLASTX nr result

ID: Coptis25_contig00016403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016403
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog ...    65   1e-08
ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog ...    64   2e-08
dbj|BAK02836.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   4e-08
ref|XP_002511033.1| conserved hypothetical protein [Ricinus comm...    63   4e-08

>ref|XP_003569995.1| PREDICTED: UPF0406 protein C16orf57 homolog [Brachypodium
           distachyon]
          Length = 275

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
 Frame = -2

Query: 143 HKEESTRLPPPPIDLLTPQNSLE---IGTGSRVRSFPHVDGNYALHVSIP 3
           ++E S  LPPPP+DLL P N ++   +  GSR+RSFPHV+GNYALHV IP
Sbjct: 24  NQEASALLPPPPLDLLQPPNFVDYSKMAQGSRIRSFPHVEGNYALHVYIP 73


>ref|XP_002322318.1| predicted protein [Populus trichocarpa] gi|222869314|gb|EEF06445.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
 Frame = -2

Query: 158 PTDPNHKEESTRLPPPPIDLLTPQNSLEI------GTGSRVRSFPHVDGNYALHVSIP 3
           P   N K E+  LPPPP+ LLTP N L        G  SR+RSFPHV GNYALHV IP
Sbjct: 29  PPVSNPKAEAIALPPPPLALLTPPNPLGALDSMLNGQSSRIRSFPHVQGNYALHVYIP 86


>ref|XP_002278790.1| PREDICTED: UPF0406 protein C16orf57 homolog [Vitis vinifera]
           gi|147791224|emb|CAN70131.1| hypothetical protein
           VITISV_030399 [Vitis vinifera]
           gi|297737378|emb|CBI26579.3| unnamed protein product
           [Vitis vinifera]
          Length = 283

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 6/59 (10%)
 Frame = -2

Query: 161 QPTDPNHKEESTRLPPPPIDLLTPQNSL------EIGTGSRVRSFPHVDGNYALHVSIP 3
           +PT+ NH + S  LPPPP+ LL+P NSL      +     RVRSFPHV+GNYALHV IP
Sbjct: 23  RPTNENH-QASGPLPPPPLALLSPPNSLGELNYSQTAQSGRVRSFPHVEGNYALHVFIP 80


>dbj|BAK02836.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 283

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
 Frame = -2

Query: 140 KEESTRLPPPPIDLLTPQNSLEIGT---GSRVRSFPHVDGNYALHVSIP 3
           +E S  LPPPP+DLL   N ++  T   GSR+RSFPHV+GNYALHV IP
Sbjct: 33  QEASALLPPPPLDLLQSPNFVDYSTIPQGSRIRSFPHVEGNYALHVYIP 81


>ref|XP_002511033.1| conserved hypothetical protein [Ricinus communis]
           gi|223550148|gb|EEF51635.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 288

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
 Frame = -2

Query: 155 TDPNHKEESTRLPPPPIDLLTPQNSLEI---GTGSRVRSFPHVDGNYALHVSIP 3
           T  N K E T LPPPP+ LL P NS++    G  SR+RSF HV+GNYALHV IP
Sbjct: 31  TISNTKPEITPLPPPPVSLLIPPNSIDYFQAGQPSRMRSFAHVEGNYALHVYIP 84


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