BLASTX nr result
ID: Coptis25_contig00016396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016396 (780 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2... 87 6e-27 ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g... 79 4e-26 emb|CBI38325.3| unnamed protein product [Vitis vinifera] 85 5e-25 ref|XP_002270412.1| PREDICTED: F-box protein PP2-B1-like [Vitis ... 85 5e-25 ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm... 93 4e-24 >ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1| predicted protein [Populus trichocarpa] Length = 304 Score = 86.7 bits (213), Expect(3) = 6e-27 Identities = 37/65 (56%), Positives = 47/65 (72%) Frame = +2 Query: 218 LDKMSGKKCFMIGEKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLHIKVEIDTQI 397 L+K SGKKC+M+ ++L I W DTP YWKW P SRF E AELI+VCWL I+ +I+ + Sbjct: 104 LEKKSGKKCYMLSARDLIIVWGDTPTYWKWNSDPSSRFGEVAELISVCWLEIRGKINATM 163 Query: 398 LSPTT 412 LSP T Sbjct: 164 LSPAT 168 Score = 50.4 bits (119), Expect(3) = 6e-27 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = +1 Query: 619 PALSSATRYEGQFPSERRDGWLEIELGDFYNEQGEDGVVEIEL 747 PA A GQ+P +R DGWLEIELG+F+ ++GED +E+ + Sbjct: 237 PASEPARENNGQYPKKREDGWLEIELGEFFCKEGEDRELEMSV 279 Score = 30.4 bits (67), Expect(3) = 6e-27 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +3 Query: 420 YEAYLVIKFSDQACGLEDPPAEISVKFLGGGGSASGERTVFLDPE 554 Y AYLV + + GL+ P E+ V G GS G R V+LD E Sbjct: 170 YTAYLVFRPTRGLYGLDYQPVEVGV---GLVGSECGMRNVYLDSE 211 >ref|XP_002308717.1| f-box family protein [Populus trichocarpa] gi|222854693|gb|EEE92240.1| f-box family protein [Populus trichocarpa] Length = 292 Score = 79.0 bits (193), Expect(3) = 4e-26 Identities = 35/65 (53%), Positives = 43/65 (66%) Frame = +2 Query: 218 LDKMSGKKCFMIGEKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLHIKVEIDTQI 397 L K SGKKC+M+ ++L I W DTP YW+W SRF E AELI VCWL I +I+ + Sbjct: 93 LVKKSGKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKINATM 152 Query: 398 LSPTT 412 LSP T Sbjct: 153 LSPAT 157 Score = 50.4 bits (119), Expect(3) = 4e-26 Identities = 21/38 (55%), Positives = 29/38 (76%) Frame = +1 Query: 634 ATRYEGQFPSERRDGWLEIELGDFYNEQGEDGVVEIEL 747 A+ GQ P ER DGWLEIELG+F+ ++GEDG +E+ + Sbjct: 231 ASENNGQHPKERGDGWLEIELGEFFCKEGEDGELEMRV 268 Score = 35.4 bits (80), Expect(3) = 4e-26 Identities = 20/45 (44%), Positives = 27/45 (60%) Frame = +3 Query: 420 YEAYLVIKFSDQACGLEDPPAEISVKFLGGGGSASGERTVFLDPE 554 Y AYLV K + A GL+ P E+ V G GS +G+R V+LD + Sbjct: 159 YAAYLVFKPKEGAYGLDYQPVEVGV---GLVGSENGKRNVYLDSQ 200 >emb|CBI38325.3| unnamed protein product [Vitis vinifera] Length = 312 Score = 85.1 bits (209), Expect(3) = 5e-25 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = +2 Query: 218 LDKMSGKKCFMIGEKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLHIKVEIDTQI 397 ++K SGKKC+MI + L I W DTP YWKWI LP SRF E AELI+VCW I+ I+T + Sbjct: 133 IEKRSGKKCYMIAARALTIEWGDTPMYWKWISLPQSRFKEVAELISVCWFEIRGRINTCL 192 Query: 398 L 400 L Sbjct: 193 L 193 Score = 44.7 bits (104), Expect(3) = 5e-25 Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 4/39 (10%) Frame = +1 Query: 652 QFPSERRDGWLEIELGDFYNEQGED----GVVEIELGDF 756 Q P +R DGWLEIELG+F+NE G++ V+E++ G++ Sbjct: 257 QHPKKREDGWLEIELGEFFNEGGDEELEMSVLEVKAGNW 295 Score = 31.2 bits (69), Expect(3) = 5e-25 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +3 Query: 417 SYEAYLVIKFSDQACGLEDPPAEISVKFLGGGGSASGERTVFLDP 551 +Y AYLV + + G E P E+S+ +GG S ++V+L+P Sbjct: 198 NYAAYLVFNSTTETYGFEYHPVEVSIGIIGGRIST---QSVYLNP 239 >ref|XP_002270412.1| PREDICTED: F-box protein PP2-B1-like [Vitis vinifera] Length = 299 Score = 85.1 bits (209), Expect(3) = 5e-25 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = +2 Query: 218 LDKMSGKKCFMIGEKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLHIKVEIDTQI 397 ++K SGKKC+MI + L I W DTP YWKWI LP SRF E AELI+VCW I+ I+T + Sbjct: 99 IEKRSGKKCYMIAARALTIEWGDTPMYWKWISLPQSRFKEVAELISVCWFEIRGRINTCL 158 Query: 398 L 400 L Sbjct: 159 L 159 Score = 44.7 bits (104), Expect(3) = 5e-25 Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 4/39 (10%) Frame = +1 Query: 652 QFPSERRDGWLEIELGDFYNEQGED----GVVEIELGDF 756 Q P +R DGWLEIELG+F+NE G++ V+E++ G++ Sbjct: 244 QHPKKREDGWLEIELGEFFNEGGDEELEMSVLEVKAGNW 282 Score = 31.2 bits (69), Expect(3) = 5e-25 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +3 Query: 417 SYEAYLVIKFSDQACGLEDPPAEISVKFLGGGGSASGERTVFLDP 551 +Y AYLV + + G E P E+S+ +GG S ++V+L+P Sbjct: 164 NYAAYLVFNSTTETYGFEYHPVEVSIGIIGGRIST---QSVYLNP 205 >ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis] gi|223546850|gb|EEF48347.1| conserved hypothetical protein [Ricinus communis] Length = 301 Score = 92.8 bits (229), Expect(2) = 4e-24 Identities = 39/65 (60%), Positives = 49/65 (75%) Frame = +2 Query: 218 LDKMSGKKCFMIGEKELKITWSDTPQYWKWIPLPDSRFAEAAELINVCWLHIKVEIDTQI 397 LDK +GKKC+M+ ++LKI+W TP YW+WI PDSRF E AELI+VCWL I I T + Sbjct: 98 LDKRNGKKCYMLSARDLKISWGGTPTYWRWISDPDSRFGEVAELISVCWLEISGTISTSL 157 Query: 398 LSPTT 412 LSP+T Sbjct: 158 LSPST 162 Score = 45.1 bits (105), Expect(2) = 4e-24 Identities = 22/49 (44%), Positives = 30/49 (61%) Frame = +3 Query: 420 YEAYLVIKFSDQACGLEDPPAEISVKFLGGGGSASGERTVFLDPECNCR 566 Y AYLV K +++A GL DPP E V+ G GS +R ++LD + N R Sbjct: 164 YSAYLVFKLNERAYGLHDPPVEAIVR--AGDGSEINKRIIYLDADTNLR 210