BLASTX nr result

ID: Coptis25_contig00016386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016386
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|2...   264   3e-68
gb|ABK93411.1| unknown [Populus trichocarpa]                          264   3e-68
ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi...   259   1e-66
emb|CBI17857.3| unnamed protein product [Vitis vinifera]              259   1e-66
ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65

>ref|XP_002324461.1| predicted protein [Populus trichocarpa] gi|222865895|gb|EEF03026.1|
            predicted protein [Populus trichocarpa]
          Length = 961

 Score =  264 bits (674), Expect = 3e-68
 Identities = 140/203 (68%), Positives = 150/203 (73%)
 Frame = -1

Query: 1051 GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFESPNSRNLSTPPPVVRKLYPKS 872
            GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAA FE+PN+RNLSTPPPVVRK+YPKS
Sbjct: 759  GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKVYPKS 818

Query: 871  VTPDSAKLASRSAAISALTAGFEQPTPENNVPRPLXXXXXXXXXXXXXXXXXXXXXXXSR 692
            V+PDSAKLAS+SAAI+ALTA FEQP P   V  P                         R
Sbjct: 819  VSPDSAKLASKSAAIAALTASFEQPPPARQVIMPRSVKVSPETPKSTPESNSKEKPISIR 878

Query: 691  IEALTIQXXXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLGM 512
            IE+LTIQ            GLP YPYE LK  S DPVTEIDVTKRETYLS+ EFREK GM
Sbjct: 879  IESLTIQEDVKEGEAEDEEGLPIYPYEGLKVNSPDPVTEIDVTKRETYLSAAEFREKFGM 938

Query: 511  TKDAFYKLPKWKQSKMKMALQLF 443
             KDAFYKLPKWKQ+K+KMALQLF
Sbjct: 939  AKDAFYKLPKWKQNKLKMALQLF 961


>gb|ABK93411.1| unknown [Populus trichocarpa]
          Length = 376

 Score =  264 bits (674), Expect = 3e-68
 Identities = 140/203 (68%), Positives = 150/203 (73%)
 Frame = -1

Query: 1051 GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFESPNSRNLSTPPPVVRKLYPKS 872
            GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAA FE+PN+RNLSTPPPVVRK+YPKS
Sbjct: 174  GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNARNLSTPPPVVRKVYPKS 233

Query: 871  VTPDSAKLASRSAAISALTAGFEQPTPENNVPRPLXXXXXXXXXXXXXXXXXXXXXXXSR 692
            V+PDSAKLAS+SAAI+ALTA FEQP P   V  P                         R
Sbjct: 234  VSPDSAKLASKSAAIAALTASFEQPPPARQVIMPRSVKVSPETPKSTPESNSKEKPISIR 293

Query: 691  IEALTIQXXXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLGM 512
            IE+LTIQ            GLP YPYE LK  S DPVTEIDVTKRETYLS+ EFREK GM
Sbjct: 294  IESLTIQEDVKEGEAEDEEGLPIYPYEGLKVNSPDPVTEIDVTKRETYLSAAEFREKFGM 353

Query: 511  TKDAFYKLPKWKQSKMKMALQLF 443
             KDAFYKLPKWKQ+K+KMALQLF
Sbjct: 354  AKDAFYKLPKWKQNKLKMALQLF 376


>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
          Length = 1002

 Score =  259 bits (661), Expect = 1e-66
 Identities = 139/201 (69%), Positives = 152/201 (75%)
 Frame = -1

Query: 1045 SSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFESPNSRNLSTPPPVVRKLYPKSVT 866
            SS+P+KSQRSRSMSFSPDRVRVRGRSPAFNALAA FE+PNSRNLSTPPP+VRKLYPKSVT
Sbjct: 802  SSLPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPMVRKLYPKSVT 861

Query: 865  PDSAKLASRSAAISALTAGFEQPTPENNVPRPLXXXXXXXXXXXXXXXXXXXXXXXSRIE 686
            PDS+KL SRSAAI+AL+A FEQP  E  VP+                         SRIE
Sbjct: 862  PDSSKLDSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIE 921

Query: 685  ALTIQXXXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLGMTK 506
            ALTI+            GLP YPYERLKTTS +PV EIDVTKRETYLSS EFR+K GMTK
Sbjct: 922  ALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTK 981

Query: 505  DAFYKLPKWKQSKMKMALQLF 443
            DAFYKLPKWKQ+K+KMALQLF
Sbjct: 982  DAFYKLPKWKQNKLKMALQLF 1002


>emb|CBI17857.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  259 bits (661), Expect = 1e-66
 Identities = 139/201 (69%), Positives = 152/201 (75%)
 Frame = -1

Query: 1045 SSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFESPNSRNLSTPPPVVRKLYPKSVT 866
            SS+P+KSQRSRSMSFSPDRVRVRGRSPAFNALAA FE+PNSRNLSTPPP+VRKLYPKSVT
Sbjct: 761  SSLPEKSQRSRSMSFSPDRVRVRGRSPAFNALAANFENPNSRNLSTPPPMVRKLYPKSVT 820

Query: 865  PDSAKLASRSAAISALTAGFEQPTPENNVPRPLXXXXXXXXXXXXXXXXXXXXXXXSRIE 686
            PDS+KL SRSAAI+AL+A FEQP  E  VP+                         SRIE
Sbjct: 821  PDSSKLDSRSAAIAALSASFEQPAREPVVPKTPKVTEEAPKPKPKPETNSKEKAMSSRIE 880

Query: 685  ALTIQXXXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLGMTK 506
            ALTI+            GLP YPYERLKTTS +PV EIDVTKRETYLSS EFR+K GMTK
Sbjct: 881  ALTIEEDVKEGEAEDEEGLPIYPYERLKTTSIEPVAEIDVTKRETYLSSEEFRQKFGMTK 940

Query: 505  DAFYKLPKWKQSKMKMALQLF 443
            DAFYKLPKWKQ+K+KMALQLF
Sbjct: 941  DAFYKLPKWKQNKLKMALQLF 961


>ref|XP_002329670.1| predicted protein [Populus trichocarpa] gi|222870551|gb|EEF07682.1|
            predicted protein [Populus trichocarpa]
          Length = 977

 Score =  254 bits (649), Expect = 2e-65
 Identities = 137/203 (67%), Positives = 149/203 (73%)
 Frame = -1

Query: 1051 GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAATFESPNSRNLSTPPPVVRKLYPKS 872
            GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAF+ALAA FESP++RNLSTPPPVVRK+YPKS
Sbjct: 775  GRSSVPDKSQRSRSMSFSPDRVRVRGRSPAFSALAANFESPSARNLSTPPPVVRKVYPKS 834

Query: 871  VTPDSAKLASRSAAISALTAGFEQPTPENNVPRPLXXXXXXXXXXXXXXXXXXXXXXXSR 692
            V+PDSAKLAS S+AI+ALTA FEQP P   V  P                        SR
Sbjct: 835  VSPDSAKLASNSSAIAALTASFEQPPPARQVIMPRSVKASPEAPKLTPESNSKENSMSSR 894

Query: 691  IEALTIQXXXXXXXXXXXXGLPTYPYERLKTTSTDPVTEIDVTKRETYLSSGEFREKLGM 512
            IE+LTIQ            GLP YPYE LK  S+DP TEIDVTKRETYLS+ EFREK GM
Sbjct: 895  IESLTIQEDVKEDEAEDEEGLPIYPYESLKVNSSDPATEIDVTKRETYLSAVEFREKFGM 954

Query: 511  TKDAFYKLPKWKQSKMKMALQLF 443
             K AFYKLPKWKQ+K+KMALQLF
Sbjct: 955  AKYAFYKLPKWKQNKLKMALQLF 977


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