BLASTX nr result

ID: Coptis25_contig00016384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016384
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]   345   1e-92
ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplast...   343   3e-92
ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|2...   340   5e-91
ref|XP_002533094.1| conserved hypothetical protein [Ricinus comm...   337   3e-90
ref|XP_003539670.1| PREDICTED: uncharacterized protein LOC100810...   331   2e-88

>emb|CAN64889.1| hypothetical protein VITISV_021080 [Vitis vinifera]
          Length = 1059

 Score =  345 bits (885), Expect = 1e-92
 Identities = 171/242 (70%), Positives = 196/242 (80%)
 Frame = +1

Query: 154  QGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 333
            +GPSCIFVGPIETA KE+LEALY QARDAYYSG+PLIVDDMFDRVELKLRWYGSKSV+KY
Sbjct: 820  EGPSCIFVGPIETASKETLEALYCQARDAYYSGEPLIVDDMFDRVELKLRWYGSKSVLKY 879

Query: 334  PRCSLRRQLTYADAEEDPSQVWALASVWMLLLAFGSLVFLVPVHYIVALAYQDALHSRLF 513
            PRCSLRR  TYADAEEDPSQV+ALAS+W+L LAFG    LVP+ Y V  AYQDA +S L 
Sbjct: 880  PRCSLRRHYTYADAEEDPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLS 939

Query: 514  SSGTETALESLAMVNRILFLVVGSIVGYPIASASVGALQRLWRNDLVALKGPCPNCGEEV 693
             S   +AL+ LA  N ILF+V+GS++GYP+ASASVG LQ LWRNDLVALKG CPNCGEEV
Sbjct: 940  YSSQASALQLLATANGILFMVLGSVIGYPVASASVGVLQGLWRNDLVALKGACPNCGEEV 999

Query: 694  FAFVRADQSNHAPHRTACHVCECSLEFRPKVEQSITRPRKQWVYGRIYLLRQRGSNRRQR 873
            FAFV++ Q N +PH   CHVCE SLEF  KVEQS     ++WVYGRIYL+ + G  +R+R
Sbjct: 1000 FAFVKSGQPNSSPHSADCHVCESSLEFSTKVEQSTL--GRRWVYGRIYLVPRSGRGQRRR 1057

Query: 874  *M 879
             M
Sbjct: 1058 RM 1059


>ref|XP_002280802.1| PREDICTED: PGR5-like protein 1B, chloroplastic [Vitis vinifera]
           gi|297746060|emb|CBI16116.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  343 bits (881), Expect = 3e-92
 Identities = 170/242 (70%), Positives = 196/242 (80%)
 Frame = +1

Query: 154 QGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 333
           +GPSCIFVGPIETA KE+LEALY QARDAYYSG+PLIVDDMFDRVELKLRWYGSKSV+KY
Sbjct: 54  EGPSCIFVGPIETASKETLEALYCQARDAYYSGEPLIVDDMFDRVELKLRWYGSKSVLKY 113

Query: 334 PRCSLRRQLTYADAEEDPSQVWALASVWMLLLAFGSLVFLVPVHYIVALAYQDALHSRLF 513
           PRCSLR+  TYADAEEDPSQV+ALAS+W+L LAFG    LVP+ Y V  AYQDA +S L 
Sbjct: 114 PRCSLRQHYTYADAEEDPSQVFALASIWILFLAFGGSACLVPIIYTVGQAYQDAFNSGLS 173

Query: 514 SSGTETALESLAMVNRILFLVVGSIVGYPIASASVGALQRLWRNDLVALKGPCPNCGEEV 693
            S   +AL+ LA  N ILF+V+GS++GYP+ASASVG LQ LWRNDLVALKG CPNCGEEV
Sbjct: 174 YSSQASALQLLATANGILFMVLGSVIGYPVASASVGVLQGLWRNDLVALKGACPNCGEEV 233

Query: 694 FAFVRADQSNHAPHRTACHVCECSLEFRPKVEQSITRPRKQWVYGRIYLLRQRGSNRRQR 873
           FAFV++ Q N +PH   CHVCE SLEF  KVEQS     ++WVYGRIYL+ + G  +R+R
Sbjct: 234 FAFVKSGQPNSSPHSADCHVCESSLEFSTKVEQSTL--GRRWVYGRIYLVPRSGRGQRRR 291

Query: 874 *M 879
            M
Sbjct: 292 RM 293


>ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|222847127|gb|EEE84674.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  340 bits (871), Expect = 5e-91
 Identities = 170/244 (69%), Positives = 193/244 (79%)
 Frame = +1

Query: 142 SLADQGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVELKLRWYGSKS 321
           +L+ +GPSCIFVGPIETA +++LEALY QARDAYYSGKPLIVDDMFDRVELKLRWYGSKS
Sbjct: 53  ALSPEGPSCIFVGPIETASQDTLEALYCQARDAYYSGKPLIVDDMFDRVELKLRWYGSKS 112

Query: 322 VVKYPRCSLRRQLTYADAEEDPSQVWALASVWMLLLAFGSLVFLVPVHYIVALAYQDALH 501
           VVKYPRCSLRRQ TY+DAEED SQ +ALAS+W+L L  GS     P+ Y V LAYQDA  
Sbjct: 113 VVKYPRCSLRRQSTYSDAEEDISQAFALASIWVLFLTIGSSACAFPIIYTVGLAYQDAFG 172

Query: 502 SRLFSSGTETALESLAMVNRILFLVVGSIVGYPIASASVGALQRLWRNDLVALKGPCPNC 681
           S +        +  LA VN ILF+ VGS++GYPIASASV  LQ LWRNDLVALKG CPNC
Sbjct: 173 SGIAHGSQAPIIGFLATVNGILFMAVGSLIGYPIASASVKVLQGLWRNDLVALKGACPNC 232

Query: 682 GEEVFAFVRADQSNHAPHRTACHVCECSLEFRPKVEQSITRPRKQWVYGRIYLLRQRGSN 861
           GEEVFAFV++DQSN +PHR  CHVCE  LEFR KVEQ+ +R  +QWVYGRIYL+    S 
Sbjct: 233 GEEVFAFVKSDQSNDSPHRADCHVCESLLEFRTKVEQTTSRVGRQWVYGRIYLV----SR 288

Query: 862 RRQR 873
           RRQR
Sbjct: 289 RRQR 292


>ref|XP_002533094.1| conserved hypothetical protein [Ricinus communis]
           gi|223527106|gb|EEF29286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score =  337 bits (864), Expect = 3e-90
 Identities = 163/240 (67%), Positives = 197/240 (82%)
 Frame = +1

Query: 154 QGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKY 333
           +GPSCI+VGP+ETA KE+LEALYRQARDAYYSG+PLIVDDMFDRVELKLRWYGSKSVVKY
Sbjct: 50  EGPSCIYVGPVETASKETLEALYRQARDAYYSGQPLIVDDMFDRVELKLRWYGSKSVVKY 109

Query: 334 PRCSLRRQLTYADAEEDPSQVWALASVWMLLLAFGSLVFLVPVHYIVALAYQDALHSRLF 513
           PRCS+RRQ TYADAE+D SQV+ALAS+W++ L  GS + + P+ Y   LAYQDA+ S++ 
Sbjct: 110 PRCSIRRQSTYADAEDDISQVFALASIWIVFLTIGSSLCVGPIIYSFVLAYQDAISSKIS 169

Query: 514 SSGTETALESLAMVNRILFLVVGSIVGYPIASASVGALQRLWRNDLVALKGPCPNCGEEV 693
                + ++ LA VN ILF+ VG+++GYPIAS+SV  LQ LWRNDLVALKG CPNCGEEV
Sbjct: 170 QGSQASMVQFLATVNGILFMAVGTLIGYPIASSSVKVLQGLWRNDLVALKGACPNCGEEV 229

Query: 694 FAFVRADQSNHAPHRTACHVCECSLEFRPKVEQSITRPRKQWVYGRIYLLRQRGSNRRQR 873
           FAFV++DQSN++PHR  CHVCE  LEFR KVE++ +R  + WVYGRIYL+    S RRQR
Sbjct: 230 FAFVKSDQSNNSPHRADCHVCESLLEFRTKVERTDSRLGRNWVYGRIYLV----SRRRQR 285


>ref|XP_003539670.1| PREDICTED: uncharacterized protein LOC100810752 [Glycine max]
          Length = 280

 Score =  331 bits (849), Expect = 2e-88
 Identities = 160/238 (67%), Positives = 190/238 (79%)
 Frame = +1

Query: 157 GPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKYP 336
           GP CI+VGP+ETA KE+LEALY QARDAYYSG+PLIVDDMFDRVEL+LRW+GSKSVVKYP
Sbjct: 43  GPCCIYVGPLETANKENLEALYCQARDAYYSGQPLIVDDMFDRVELRLRWFGSKSVVKYP 102

Query: 337 RCSLRRQLTYADAEEDPSQVWALASVWMLLLAFGSLVFLVPVHYIVALAYQDALHSRLFS 516
           RCS+RRQ T+ADAEED S V+ALAS W + LAFGSL  + PV Y V +AYQ+A  S L  
Sbjct: 103 RCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPVSYTVGMAYQNAFDSGLSL 162

Query: 517 SGTETALESLAMVNRILFLVVGSIVGYPIASASVGALQRLWRNDLVALKGPCPNCGEEVF 696
                 L  LA+VN ++F+ +G ++GYP+ASAS   LQ LWRNDLVALKG CPNCGEEVF
Sbjct: 163 GSQTPGLGFLAVVNSLIFVGLGFVIGYPVASASAKVLQGLWRNDLVALKGACPNCGEEVF 222

Query: 697 AFVRADQSNHAPHRTACHVCECSLEFRPKVEQSITRPRKQWVYGRIYLLRQRGSNRRQ 870
           AFVR D++  +PHR  CHVCEC LEFR KVEQS++R  +QWVYGRIYL+  RG +RR+
Sbjct: 223 AFVRMDRNIESPHRADCHVCECILEFRTKVEQSVSRFGRQWVYGRIYLVSLRGRSRRK 280


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