BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016383
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti...   480   e-133
ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|...   472   e-131
ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
gb|AFK45008.1| unknown [Lotus japonicus]                              452   e-125
ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124

>ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
            gi|302142670|emb|CBI19873.3| unnamed protein product
            [Vitis vinifera]
          Length = 375

 Score =  480 bits (1235), Expect = e-133
 Identities = 233/349 (66%), Positives = 276/349 (79%), Gaps = 2/349 (0%)
 Frame = +1

Query: 88   PPLITAQLNYLLSHYPLPIKVEQIWSGGKAQQFSDRFTLLIPLCLDYIKWDVIYNAQYPL 267
            PP+I AQ+NYLLSH PL IK++Q+W+G K     DRF+LLIP CLD+IKWDVIYNAQ PL
Sbjct: 7    PPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIYNAQCPL 66

Query: 268  VAPDVIFGVEDENFHPFFNTGEGGNTK--KSCLCDWNCKDPTMLLSLIHELRVQYIVYQR 441
             APDVIFG EDENFHPF  TG+ G+ K  K+ L DWN KDP+ LL+LIHELR  Y+ YQ+
Sbjct: 67   AAPDVIFGPEDENFHPFCVTGDEGDFKLSKNSLSDWNSKDPSGLLTLIHELRDLYLSYQK 126

Query: 442  KKVGQLDDERLKFEISTIHPREGIEVYMNSGPDKAEEVKFAVPXXXXXXXXXXXXCPWRH 621
            K++G++DD+RLKFEISTI  REGIE+YM+SG +K EEVKF+VP            C WRH
Sbjct: 127  KRIGEVDDDRLKFEISTIVSREGIEMYMSSGVEKPEEVKFSVPLLDMDINKMVFGCNWRH 186

Query: 622  QQKIYLQVIFPVSRKYSPAPTAPRLKLVCSSELKALFSIDDVKLPAWLDGMCMAEYLPVI 801
            QQKIYLQVIFPV RKY  AP+APRLKLV S ELK LF I+DVKLP WLDGMCMAEYLP +
Sbjct: 187  QQKIYLQVIFPVGRKYVSAPSAPRLKLVSSPELKVLFPIEDVKLPPWLDGMCMAEYLPNL 246

Query: 802  EDKLKSQLVEAGASIGARKRFIEALTPLFGRPLEADSIFCRKATFFASSGIFTFLVHFSL 981
            E+ L+ Q+++A + I  R+ FIEAL P+FGRPLEAD +FCRK TF A+SG+FT LVHF L
Sbjct: 247  EETLERQILDAVSLIDVRRHFIEALAPVFGRPLEADPVFCRKVTFLAASGVFTCLVHFFL 306

Query: 982  STQFPKQQPALVLQSSQHFNSQGTPVVSPPLIDYPWSPRWDVSKMAERI 1128
             TQFPKQQP L+LQSSQHFNSQG P+ S  L +YPWSPRW+ S+MAERI
Sbjct: 307  PTQFPKQQPVLMLQSSQHFNSQGAPIKSHLLTEYPWSPRWESSQMAERI 355


>ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|223551242|gb|EEF52728.1|
            Protein BRE, putative [Ricinus communis]
          Length = 362

 Score =  472 bits (1215), Expect = e-131
 Identities = 235/351 (66%), Positives = 277/351 (78%), Gaps = 4/351 (1%)
 Frame = +1

Query: 88   PPLITAQLNYLLSHYPLPIKVEQIWSGGKAQQFS-DRFTLLIPLCLDYIKWDVIYNAQYP 264
            PP I+AQL YLL+HY   IKVEQ+WSG K    S DRFTLLIP CLDY+KWD+IYN ++P
Sbjct: 7    PPFISAQLQYLLNHYTHAIKVEQVWSGSKYYPGSLDRFTLLIPYCLDYLKWDIIYNVEFP 66

Query: 265  LVAPDVIFGVEDENFHPF-FNTGEGGNTK--KSCLCDWNCKDPTMLLSLIHELRVQYIVY 435
            L APDVIFG EDENFHPF    GE  +++   + L DWN KDPT LL+LI ELR  Y+ Y
Sbjct: 67   LAAPDVIFGPEDENFHPFHLVVGEVADSRLVNNSLTDWNNKDPTRLLALIEELRDNYMSY 126

Query: 436  QRKKVGQLDDERLKFEISTIHPREGIEVYMNSGPDKAEEVKFAVPXXXXXXXXXXXXCPW 615
            Q+K+VG++DD+RLKFEISTI  REGIE++M+SG +K EEVKFAVP            CPW
Sbjct: 127  QKKRVGEVDDDRLKFEISTILSREGIEMHMSSGFEKPEEVKFAVPLMDMNINKMVFACPW 186

Query: 616  RHQQKIYLQVIFPVSRKYSPAPTAPRLKLVCSSELKALFSIDDVKLPAWLDGMCMAEYLP 795
            RH QKIYLQVI+PV RKY  AP+APRLKL+ ++ELKALFSIDDVKLP WLDGMCMAEYLP
Sbjct: 187  RHPQKIYLQVIYPVGRKYVSAPSAPRLKLMSTTELKALFSIDDVKLPPWLDGMCMAEYLP 246

Query: 796  VIEDKLKSQLVEAGASIGARKRFIEALTPLFGRPLEADSIFCRKATFFASSGIFTFLVHF 975
             +E+ L+ Q+ EA + I  R+ FIEAL PLFGRPLEAD +FCRKATF A+SG FTFLVH 
Sbjct: 247  NLEELLQRQVSEAVSLIDVRRCFIEALAPLFGRPLEADPVFCRKATFLAASGPFTFLVHL 306

Query: 976  SLSTQFPKQQPALVLQSSQHFNSQGTPVVSPPLIDYPWSPRWDVSKMAERI 1128
             LSTQFPKQQP+L+LQS+QHFN+ GTPV S  L DYPWSPRW++S+MAERI
Sbjct: 307  YLSTQFPKQQPSLMLQSTQHFNTHGTPVKSSLLADYPWSPRWEISQMAERI 357


>ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|222857177|gb|EEE94724.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  457 bits (1176), Expect = e-126
 Identities = 225/351 (64%), Positives = 275/351 (78%), Gaps = 4/351 (1%)
 Frame = +1

Query: 88   PPLITAQLNYLLSHYPLPIKVEQIWSGGKAQQFS-DRFTLLIPLCLDYIKWDVIYNAQYP 264
            PP I+AQL YLL+HYP  I++EQ  SG +    S DRFTLLIP CLDY+KWDVIYNA++P
Sbjct: 7    PPFISAQLQYLLNHYPHTIQIEQARSGTRYFPGSLDRFTLLIPYCLDYMKWDVIYNAEFP 66

Query: 265  LVAPDVIFGVEDENFHPFFNT-GEGGNTK--KSCLCDWNCKDPTMLLSLIHELRVQYIVY 435
            L APDVIFG EDE+FHPF    GE G+++  K+ L DWN KDPT LL+L+ ELR +Y  Y
Sbjct: 67   LAAPDVIFGAEDEDFHPFHVLCGEDGDSRLVKNSLTDWNNKDPTRLLALVIELRDKYRSY 126

Query: 436  QRKKVGQLDDERLKFEISTIHPREGIEVYMNSGPDKAEEVKFAVPXXXXXXXXXXXXCPW 615
            Q K+VG++DD+RLKFEISTI  REGIE++M+SG +K EEVKFAVP            CPW
Sbjct: 127  QEKRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPEEVKFAVPLMNMNINKMVPACPW 186

Query: 616  RHQQKIYLQVIFPVSRKYSPAPTAPRLKLVCSSELKALFSIDDVKLPAWLDGMCMAEYLP 795
            RH QKIYLQVI+PV RKY+P+P+APRLKL+C+ ELKALFSIDDVKLP+WLDGMCMAEYLP
Sbjct: 187  RHPQKIYLQVIYPVGRKYAPSPSAPRLKLMCTPELKALFSIDDVKLPSWLDGMCMAEYLP 246

Query: 796  VIEDKLKSQLVEAGASIGARKRFIEALTPLFGRPLEADSIFCRKATFFASSGIFTFLVHF 975
             +E+ L+ Q++EA   I  R++FIEAL PL GRPLEAD +FCRKA+F   SG FT ++H 
Sbjct: 247  HLEELLQRQVLEAVTLIDVRRQFIEALAPLLGRPLEADPVFCRKASFLVCSGPFTIMLHV 306

Query: 976  SLSTQFPKQQPALVLQSSQHFNSQGTPVVSPPLIDYPWSPRWDVSKMAERI 1128
             LST FPKQQP+L+ QS+QHFNS G PV SP + +YPWSPRW+ S+MA+RI
Sbjct: 307  FLSTNFPKQQPSLMFQSTQHFNSLGMPVKSPLITEYPWSPRWETSQMADRI 357


>gb|AFK45008.1| unknown [Lotus japonicus]
          Length = 378

 Score =  452 bits (1163), Expect = e-125
 Identities = 222/351 (63%), Positives = 268/351 (76%), Gaps = 3/351 (0%)
 Frame = +1

Query: 85   LPPLITAQLNYLLSHYPLPIKVEQIWSGGKAQQFS-DRFTLLIPLCLDYIKWDVIYNAQY 261
            +PP I AQL +LLSH+PL +KVE  WSG K    + DRFTLLIP CLD+IKWDVIYN   
Sbjct: 8    VPPFIAAQLTHLLSHFPLNLKVEHAWSGDKYNSGAFDRFTLLIPYCLDFIKWDVIYNVDC 67

Query: 262  PLVAPDVIFGVEDENFHPF--FNTGEGGNTKKSCLCDWNCKDPTMLLSLIHELRVQYIVY 435
            P+ APDVIFG EDE+FHPF    +GEG +   +CL DWN KDPT LL LI  LR QY++Y
Sbjct: 68   PIAAPDVIFGAEDEDFHPFHMLPSGEGASLPSNCLSDWNYKDPTRLLVLIQFLRDQYVLY 127

Query: 436  QRKKVGQLDDERLKFEISTIHPREGIEVYMNSGPDKAEEVKFAVPXXXXXXXXXXXXCPW 615
            QRK+V  +DDERLKFE+STI  REGIE++ +SG +K+EEVKFAVP            CPW
Sbjct: 128  QRKRVEGVDDERLKFEVSTIVSREGIEMHRSSGFEKSEEVKFAVPLLDMNINKMVPGCPW 187

Query: 616  RHQQKIYLQVIFPVSRKYSPAPTAPRLKLVCSSELKALFSIDDVKLPAWLDGMCMAEYLP 795
            R+ Q+++LQV++PV RKY  AP+APRLKLV +SELKALFSIDDVKLP WLDGMC+AEYLP
Sbjct: 188  RYPQRMHLQVVYPVGRKYLSAPSAPRLKLVSTSELKALFSIDDVKLPPWLDGMCLAEYLP 247

Query: 796  VIEDKLKSQLVEAGASIGARKRFIEALTPLFGRPLEADSIFCRKATFFASSGIFTFLVHF 975
             +E+ L+ Q++EA + I  R+RFIEAL    GRPLEAD +FCRKATF  +SG FTFL HF
Sbjct: 248  NLEEYLEKQVLEAVSLIDVRRRFIEALAGPLGRPLEADPVFCRKATFLCTSGAFTFLAHF 307

Query: 976  SLSTQFPKQQPALVLQSSQHFNSQGTPVVSPPLIDYPWSPRWDVSKMAERI 1128
             + TQFPKQQP ++LQSSQ+FNSQ TP+ S  + DYPWSPRW+ S MAERI
Sbjct: 308  LIPTQFPKQQPTIMLQSSQYFNSQTTPIKSRLISDYPWSPRWEPSLMAERI 358


>ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|222842428|gb|EEE79975.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  450 bits (1157), Expect = e-124
 Identities = 222/350 (63%), Positives = 274/350 (78%), Gaps = 4/350 (1%)
 Frame = +1

Query: 91   PLITAQLNYLLSHYPLPIKVEQIWSGGKAQQFS-DRFTLLIPLCLDYIKWDVIYNAQYPL 267
            PLI++QL YLL+H+P  I++EQ WSG +    S DRFTLLIP CLDYIKWD+IYNA++PL
Sbjct: 8    PLISSQLQYLLNHFPHTIQIEQAWSGTRYFPGSLDRFTLLIPYCLDYIKWDIIYNAEFPL 67

Query: 268  VAPDVIFGVEDENFHPFFNTG-EGGNTK--KSCLCDWNCKDPTMLLSLIHELRVQYIVYQ 438
             APDVIFG ED+ FHPF   G E G+++  K+ L DWN KDP+ LL+L+ ELR +Y  YQ
Sbjct: 68   AAPDVIFGPEDDGFHPFIVVGREEGDSRLVKNSLTDWNNKDPSRLLALVMELRDKYRSYQ 127

Query: 439  RKKVGQLDDERLKFEISTIHPREGIEVYMNSGPDKAEEVKFAVPXXXXXXXXXXXXCPWR 618
             ++VG++DD+RLKFEISTI  REGIE++M+SG +K  EVKFAVP            CPW 
Sbjct: 128  ERRVGEVDDDRLKFEISTIVSREGIEMHMSSGVEKPGEVKFAVPLMDMNINKMVLGCPWS 187

Query: 619  HQQKIYLQVIFPVSRKYSPAPTAPRLKLVCSSELKALFSIDDVKLPAWLDGMCMAEYLPV 798
            H QKIYLQVI+PV RKY+PA +APRLKL+C+ ELKALFSID+VKLPAWLDGMCMAEYLP 
Sbjct: 188  HPQKIYLQVIYPVGRKYAPATSAPRLKLMCTPELKALFSIDEVKLPAWLDGMCMAEYLPH 247

Query: 799  IEDKLKSQLVEAGASIGARKRFIEALTPLFGRPLEADSIFCRKATFFASSGIFTFLVHFS 978
            +E+ L+ Q++EA   I  R++FIEAL+P+ GRPLEAD +FCRKA+F   SG FTFLVHF 
Sbjct: 248  LEELLQRQVLEAVTLIDVRRQFIEALSPVIGRPLEADPVFCRKASFLVCSGPFTFLVHFF 307

Query: 979  LSTQFPKQQPALVLQSSQHFNSQGTPVVSPPLIDYPWSPRWDVSKMAERI 1128
            LSTQFPKQ+P+L+ QS QHFNS G PV SP + +Y WSPRW+ S+MAERI
Sbjct: 308  LSTQFPKQRPSLMFQSIQHFNSLGIPVKSPLITEYLWSPRWEPSQMAERI 357