BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016379
         (1590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   115   7e-45
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]   114   3e-44
emb|CBI34887.3| unnamed protein product [Vitis vinifera]              126   3e-44
ref|XP_003623771.1| DEAD box family helicase [Medicago truncatul...   106   2e-33
ref|XP_003623770.1| Ankyrin repeat and zinc finger domain-contai...   106   5e-28

>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  115 bits (287), Expect(2) = 7e-45
 Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
 Frame = -2

Query: 1589 VIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEHIGLDLHEKLF 1410
            V+G EEDNLILFHEKI      SPYST +L+S PQQGKLTVKADLIFEE+IG+DLH+KL 
Sbjct: 1542 VVGLEEDNLILFHEKI------SPYSTTILLSTPQQGKLTVKADLIFEEYIGIDLHQKLL 1595

Query: 1409 MERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRASNKSKMETSS 1233
            + +  ++ M + R S   SSF   LPKE+YV+EDDN    S + ++    S KSK E  S
Sbjct: 1596 VVKEINSNMIHARGSKQLSSF--PLPKEVYVIEDDN-EDASHSSSKGLDISKKSKREMDS 1652

Query: 1232 M 1230
            +
Sbjct: 1653 L 1653



 Score = 94.0 bits (232), Expect(2) = 7e-45
 Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 9/306 (2%)
 Frame = -1

Query: 1119 EAEENRCDTITEKTIFDHIRRKAKSFPVLAPSDAMNSSISEISICRGRYPYKSRNELHMV 940
            E E++ C  ITE+T+F+HIR+K+KSF VL  S+A  S  SE  I   +  ++ + ELH+ 
Sbjct: 1671 ETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELHVT 1730

Query: 939  TEVPDSDRDKIHTQTVTISDSEPGDPENHSYGTDEDTVSTYHIKAKSSGIFKEDMMEVGH 760
              + +++R KI  + +        + E +  G  +++ + Y   A  S +    M +   
Sbjct: 1731 EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQ-PATGSLVVMNFMDDRAD 1789

Query: 759  XXXXXXXXXXAVTQETVFDHIRKKAKHFPDFTTTKIMELEPLTPTRDCFNKEQSEI-PYA 583
                       VT+ T+FDHIR+KAK+F  F  ++  E +    T++ F++ Q  +   +
Sbjct: 1790 LPERTESTSQIVTENTIFDHIRRKAKNFLVFNKSETPESDSTILTKEHFSENQPVLHEDS 1849

Query: 582  VGVHRGIDFS-TQRETKVVPDSGHGEVEEHIYRFNNDAKEKHHELFGN--SNDRSREQCQ 412
                 G + S   + T V+ DS   ++E+  +     AK   + + G+  S   S +   
Sbjct: 1850 FDTLEGTNSSEALKTTVVISDSEPKKMEKESHHVREGAKMDPNIISGSTCSTHGSLDPLP 1909

Query: 411  SVSA-----TYSNILEVQEVTQPSHKRRPALPLQDVGEYSSKQQRSSNGSNRQLCALDVM 247
             VS+     T+     V  V        P + ++++     K+  S NGS  Q C     
Sbjct: 1910 EVSSIQTDPTHIPSFYVARVKNNVQNADPGMCVKNI----RKRSLSPNGSKGQCCPAATP 1965

Query: 246  GENKEV 229
            G+ +EV
Sbjct: 1966 GKIREV 1971


>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
          Length = 1131

 Score =  114 bits (284), Expect(2) = 3e-44
 Identities = 67/121 (55%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
 Frame = -2

Query: 1589 VIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEHIGLDLHEKLF 1410
            V+G EEDNLILFHEKI      SPYST +L+S PQQGKLTVKADLIFEE+IG+DLH+KL 
Sbjct: 688  VVGLEEDNLILFHEKI------SPYSTTILLSTPQQGKLTVKADLIFEEYIGIDLHQKLL 741

Query: 1409 MERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRASNKSKMETSS 1233
            + +  ++ M + R S   SSF   LPKE+YV+EDDN    S   ++    S KSK E  S
Sbjct: 742  VVKEINSNMIHXRGSKQLSSF--PLPKEVYVIEDDN-EDXSHXSSKGLDISKKSKREMDS 798

Query: 1232 M 1230
            +
Sbjct: 799  L 799



 Score = 93.2 bits (230), Expect(2) = 3e-44
 Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 9/306 (2%)
 Frame = -1

Query: 1119 EAEENRCDTITEKTIFDHIRRKAKSFPVLAPSDAMNSSISEISICRGRYPYKSRNELHMV 940
            E E++ C  ITE+T+F+HIR+K+KSF VL  S+A  S  SE  I   +  ++ + ELH+ 
Sbjct: 818  ETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELHVT 877

Query: 939  TEVPDSDRDKIHTQTVTISDSEPGDPENHSYGTDEDTVSTYHIKAKSSGIFKEDMMEVGH 760
              + +++R KI  + +        + E +  G  +++ + Y   A  S +    M +   
Sbjct: 878  EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQ-PATGSLVVMNFMDDRAD 936

Query: 759  XXXXXXXXXXAVTQETVFDHIRKKAKHFPDFTTTKIMELEPLTPTRDCFNKEQSEI-PYA 583
                       V ++T+FDHIR+KAK+F  F  ++  E +    T++ F++ Q  +   +
Sbjct: 937  LPERXEXTSQIVXEBTIFDHIRRKAKNFXVFNKSETPESDSXILTKEHFSENQPVLHEDS 996

Query: 582  VGVHRGIDFS-TQRETKVVPDSGHGEVEEHIYRFNNDAKEKHHELFGN--SNDRSREQCQ 412
                 G + S   + T V+ DS   ++E+  +     AK   + + G+  S   S +   
Sbjct: 997  FDTLEGTNSSEALKTTXVISDSEPKKMEKESHHVREGAKMDPNIISGSTCSTHGSLDPLP 1056

Query: 411  SVSA-----TYSNILEVQEVTQPSHKRRPALPLQDVGEYSSKQQRSSNGSNRQLCALDVM 247
             VS+     T+     V  V        P + ++++     K+  S NGS  Q C     
Sbjct: 1057 EVSSIQTDPTHIPSFYVARVKNNVQNADPGMCVKNI----RKRSLSPNGSKGQCCPAATP 1112

Query: 246  GENKEV 229
            G+ +EV
Sbjct: 1113 GKIREV 1118


>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
          Length = 1270

 Score =  126 bits (317), Expect(2) = 3e-44
 Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
 Frame = -2

Query: 1589 VIGSEEDNLILFHEKI-RVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEHIGLDLHEKL 1413
            V+G EEDNLILFHEKI RV+EFSSPYST +L+S PQQGKLTVKADLIFEE+IG+DLH+KL
Sbjct: 789  VVGLEEDNLILFHEKISRVDEFSSPYSTTILLSTPQQGKLTVKADLIFEEYIGIDLHQKL 848

Query: 1412 FMERATDAKM-NQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRASNKSKMETS 1236
             + +  ++ M + R S   SSF   LPKE+YV+EDDN    S + ++    S KSK E  
Sbjct: 849  LVVKEINSNMIHARGSKQLSSF--PLPKEVYVIEDDN-EDASHSSSKGLDISKKSKREMD 905

Query: 1235 SM 1230
            S+
Sbjct: 906  SL 907



 Score = 80.1 bits (196), Expect(2) = 3e-44
 Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 39/336 (11%)
 Frame = -1

Query: 1119 EAEENRCDTITEKTIFDHIRRKAKSFPVLAPSDAMNSSISEISICRGRYPYKSRNELHMV 940
            E E++ C  ITE+T+F+HIR+K+KSF VL  S+A  S  SE  I   +  ++ + ELH+ 
Sbjct: 926  ETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEALILTRKRTHEQQLELHVT 985

Query: 939  TEVPDSDRDKIHTQTVTISDSEPGDPENHSYGTDEDTVSTYHIKAKS------------- 799
              + +++R KI  + +        + E +  G  +++ + Y     S             
Sbjct: 986  EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQPATGSLVVMNFMDDRGAF 1045

Query: 798  ----------------SGIFKEDMMEV-GHXXXXXXXXXXAVTQETVFDHIRKKAKHFPD 670
                             G+     + +              VT+ T+FDHIR+KAK+F  
Sbjct: 1046 LFYFIKCYYYYHYSVLYGVLNHLFVSIQADLPERTESTSQIVTENTIFDHIRRKAKNFLV 1105

Query: 669  FTTTKIMELEPLTPTRDCFNKEQSEI-PYAVGVHRGIDFS-TQRETKVVPDSGHGEVEEH 496
            F  ++  E +    T++ F++ Q  +   +     G + S   + T V+ DS   ++E+ 
Sbjct: 1106 FNKSETPESDSTILTKEHFSENQPVLHEDSFDTLEGTNSSEALKTTVVISDSEPKKMEKE 1165

Query: 495  IYRFNNDAKEKHHELFGN--SNDRSREQCQSVSA-----TYSNILEVQEVTQPSHKRRPA 337
             +     AK   + + G+  S   S +    VS+     T+     V  V        P 
Sbjct: 1166 SHHVREGAKMDPNIISGSTCSTHGSLDPLPEVSSIQTDPTHIPSFYVARVKNNVQNADPG 1225

Query: 336  LPLQDVGEYSSKQQRSSNGSNRQLCALDVMGENKEV 229
            + ++++     K+  S NGS  Q C     G+ +EV
Sbjct: 1226 MCVKNI----RKRSLSPNGSKGQCCPAATPGKIREV 1257


>ref|XP_003623771.1| DEAD box family helicase [Medicago truncatula]
            gi|355498786|gb|AES79989.1| DEAD box family helicase
            [Medicago truncatula]
          Length = 768

 Score =  106 bits (265), Expect(2) = 2e-33
 Identities = 58/120 (48%), Positives = 83/120 (69%)
 Frame = -2

Query: 1589 VIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEHIGLDLHEKLF 1410
            +IG EEDN I FHEKIRV++FSSPYST +LV    QGK T+KA+ IFEE+IG+D+H+KLF
Sbjct: 288  IIGLEEDNTIFFHEKIRVDQFSSPYSTTILVPI-SQGKQTIKANFIFEEYIGIDVHQKLF 346

Query: 1409 MERATDAKMNQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRASNKSKMETSSM 1230
              +   + +  +R+  ++SF    P+EI+V+EDD+ N T     EE    +K K E++S+
Sbjct: 347  FMKEISSDVILKRNRKQASFPP--PEEIFVIEDDDRNLT-HIPQEETSTLSKDKEESNSI 403



 Score = 63.9 bits (154), Expect(2) = 2e-33
 Identities = 77/325 (23%), Positives = 134/325 (41%), Gaps = 27/325 (8%)
 Frame = -1

Query: 1119 EAEENRCDTITEKTIFDHIRRKAKSFPVLAPSDAMNSSISEISICRGRYPYKSRNELHMV 940
            E +E++   ITEKT+FDHIR KAK+F +L+  + +     E+ + R     K  N  H  
Sbjct: 421  EVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEVLLGRNHACEKWSNHGHEK 480

Query: 939  TE-------VPDSDRDKIHTQTVTISDSEPGDPENHSYGTDEDTVSTYHIKAKSSGIFKE 781
            T        V D D +K+  QT     ++    E         T++ ++I   S  I   
Sbjct: 481  TSYHGHEVVVLDDDDNKVPGQTDVNFQADLRKAEQEDINLSL-TLNDHNIAVNSDNI--S 537

Query: 780  DMMEVG-HXXXXXXXXXXAVTQETVFDHIRKKAKHFPDFTTTKIMELEPLTPTRDCFNKE 604
             +++ G              T+ETVFDHI++K++ FP    +K+  LE      + F+K 
Sbjct: 538  SVVDTGIFFPEPKARSYENATEETVFDHIKRKSEDFPQI--SKLDCLETAIKKTEFFSKN 595

Query: 603  Q-SEIPYAVGVHRGIDFSTQ-RETKVVPDSGHGEVEEHIYRFNNDAKEKHHELFGNSNDR 430
              + +  A+G+    +FS     + +  D    +VE +   F       H +   + +  
Sbjct: 596  HPNSLKAALGMVAETNFSDMVTGSMLTSDMKTADVENYSSGFQVGTSVNHKK---SEDSC 652

Query: 429  SREQCQSVSATYSNILEVQE------VTQPSHKRRPALPLQDVGEYSSKQQR-------- 292
              +   ++S   S+   VQ       +  P  K +         E  SK+QR        
Sbjct: 653  CTDGVVNISKGVSSTNSVQSSNFVPFIGFPMSKEKNWSSDSGSFEQRSKKQRCSPIESKE 712

Query: 291  ---SSNGSNRQLCALDVMGENKEVQ 226
               +S    RQ C+L+  G+  +++
Sbjct: 713  EKLNSCEIRRQCCSLETTGQMNQME 737


>ref|XP_003623770.1| Ankyrin repeat and zinc finger domain-containing protein [Medicago
            truncatula] gi|355498785|gb|AES79988.1| Ankyrin repeat
            and zinc finger domain-containing protein [Medicago
            truncatula]
          Length = 803

 Score =  106 bits (265), Expect(2) = 5e-28
 Identities = 58/120 (48%), Positives = 83/120 (69%)
 Frame = -2

Query: 1589 VIGSEEDNLILFHEKIRVNEFSSPYSTEVLVSAPQQGKLTVKADLIFEEHIGLDLHEKLF 1410
            +IG EEDN I FHEKIRV++FSSPYST +LV    QGK T+KA+ IFEE+IG+D+H+KLF
Sbjct: 241  IIGLEEDNTIFFHEKIRVDQFSSPYSTTILVPI-SQGKQTIKANFIFEEYIGIDVHQKLF 299

Query: 1409 MERATDAKMNQRRSNLKSSFTHDLPKEIYVLEDDNMNSTSETMTEEHRASNKSKMETSSM 1230
              +   + +  +R+  ++SF    P+EI+V+EDD+ N T     EE    +K K E++S+
Sbjct: 300  FMKEISSDVILKRNRKQASFPP--PEEIFVIEDDDRNLT-HIPQEETSTLSKDKEESNSI 356



 Score = 45.8 bits (107), Expect(2) = 5e-28
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
 Frame = -1

Query: 1119 EAEENRCDTITEKTIFDHIRRKAKSFPVLAPSDAMNSSISEISICRGRYPYKSRNELHMV 940
            E +E++   ITEKT+FDHIR KAK+F +L+  + +     E+ + R     K  N  H  
Sbjct: 374  EVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEVLLGRNHACEKWSNHGHEK 433

Query: 939  TE-------VPDSDRDKIHTQT 895
            T        V D D +K+  QT
Sbjct: 434  TSYHGHEVVVLDDDDNKVPGQT 455