BLASTX nr result

ID: Coptis25_contig00016377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016377
         (4655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis...   323   4e-85
gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]           322   6e-85
gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia] gi...   321   1e-84
gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]   321   1e-84
gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]       321   1e-84

>ref|YP_002836097.1| ATP synthase CF1 beta subunit [Megaleranthis saniculifolia]
           gi|226933889|gb|ACO92022.1| ATP synthase CF1 beta
           subunit [Megaleranthis saniculifolia]
          Length = 498

 Score =  323 bits (827), Expect = 4e-85
 Identities = 163/167 (97%), Positives = 165/167 (98%)
 Frame = -2

Query: 502 MKINSTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 323
           M+IN TTSGPGVSALEEKNLGRIAQIIGPVLDVSFP GKMPNIYNALVVKGQDTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPLGKMPNIYNALVVKGQDTVGQQIN 60

Query: 322 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 143
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEV+DTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVLDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 142 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 2
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 167


>gb|ACF35653.1| ATP synthase beta subunit [Floydia praealta]
          Length = 487

 Score =  322 bits (825), Expect = 6e-85
 Identities = 163/167 (97%), Positives = 165/167 (98%)
 Frame = -2

Query: 502 MKINSTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 323
           MKIN TTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MKINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 322 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 143
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 142 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 2
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 167


>gb|AAX73333.1| ATP synthase beta subunit [Banksia ericifolia]
           gi|62184046|gb|AAX73334.1| ATP synthase beta subunit
           [Banksia brownii] gi|62184052|gb|AAX73337.1| ATP
           synthase beta subunit [Banksia nutans]
           gi|62184056|gb|AAX73339.1| ATP synthase beta subunit
           [Banksia pulchella] gi|62184074|gb|AAX73348.1| ATP
           synthase beta subunit [Musgravea heterophylla]
          Length = 497

 Score =  321 bits (822), Expect = 1e-84
 Identities = 162/167 (97%), Positives = 165/167 (98%)
 Frame = -2

Query: 502 MKINSTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 323
           M+IN TTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 322 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 143
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 142 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 2
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 167


>gb|AAX73349.1| ATP synthase beta subunit [Austromuellera trinervia]
          Length = 496

 Score =  321 bits (822), Expect = 1e-84
 Identities = 162/167 (97%), Positives = 165/167 (98%)
 Frame = -2

Query: 502 MKINSTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 323
           M+IN TTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 322 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 143
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 142 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 2
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 167


>gb|AAX73332.1| ATP synthase beta subunit [Banksia oblongifolia]
          Length = 494

 Score =  321 bits (822), Expect = 1e-84
 Identities = 162/167 (97%), Positives = 165/167 (98%)
 Frame = -2

Query: 502 MKINSTTSGPGVSALEEKNLGRIAQIIGPVLDVSFPAGKMPNIYNALVVKGQDTVGQQIN 323
           M+IN TTSGPGVSALEEKNLGRIAQIIGPVLDV+FP GKMPNIYNALVVKG+DTVGQQIN
Sbjct: 1   MRINPTTSGPGVSALEEKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQIN 60

Query: 322 VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 143
           VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN
Sbjct: 61  VTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDN 120

Query: 142 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 2
           LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK
Sbjct: 121 LGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGK 167


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