BLASTX nr result
ID: Coptis25_contig00016366
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016366 (2172 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520668.1| nucleic acid binding protein, putative [Rici... 443 e-122 ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containin... 441 e-121 ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 437 e-120 emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 434 e-119 ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2... 429 e-117 >ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis] gi|223540053|gb|EEF41630.1| nucleic acid binding protein, putative [Ricinus communis] Length = 478 Score = 443 bits (1140), Expect = e-122 Identities = 216/374 (57%), Positives = 254/374 (67%), Gaps = 8/374 (2%) Frame = +1 Query: 265 SQTGLEESMRKLGLDEK---ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVG 435 ++TGLEESM +LGL+ E YPER P+CVYYMRTG CGYG+RCR+NHPRNRA V Sbjct: 26 AETGLEESMWRLGLNNSGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEA 85 Query: 436 TVTEGVEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGSVSLNANGYPLRPGE 615 V EYPER G+P C+FYLKTGTCKFGA CKFHHPK+ GG + V LN +GYPLRPGE Sbjct: 86 AVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLRPGE 145 Query: 616 NECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPSSQHYEVAPNWQV 795 NECSYY+KTGQCKFGI CKFHHPQPAG+S+ AP FYQ VQS +P Y A Sbjct: 146 NECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAPQFYQPVQSPSIPIPDQYGGASASLR 205 Query: 796 TRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIGPGSFYGVTQ 972 RPPL+ GSY+QGAYG VL G+VP+P W+ Y +G S YGVTQ Sbjct: 206 VRPPLLPGSYVQGAYG-PVLFSPGVVPIPGWSPYSAPVSPVLSPSAQPAVGATSLYGVTQ 264 Query: 973 VSSSAPS----YTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKYGSSCR 1140 +SSS P+ Y G Q E TFPERPG+PEC YY+R G CK+GSSCR Sbjct: 265 LSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCKFGSSCR 324 Query: 1141 YHHPPERLMPSTSFVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLXXXXXX 1320 YHHP +R++P T+ VLS +GLPLRPGA C+ Y++ G C+FG TCK+DHPM T+ Sbjct: 325 YHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYLRNGHCKFGSTCKFDHPMETMRYSPSA 384 Query: 1321 XXLADMPVAPYPVG 1362 L DMPVAPYPVG Sbjct: 385 SSLIDMPVAPYPVG 398 >ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1 [Vitis vinifera] gi|296086618|emb|CBI32253.3| unnamed protein product [Vitis vinifera] Length = 475 Score = 441 bits (1134), Expect = e-121 Identities = 227/448 (50%), Positives = 280/448 (62%), Gaps = 11/448 (2%) Frame = +1 Query: 241 TQSDP-----PHYSQTGLEESMRKLGLDEKELYPERLSEPNCVYYMRTGSCGYGDRCRFN 405 +QSDP P + +GLEESM +LGL +E YPER +CVYYM+TG CG+G RCR+N Sbjct: 13 SQSDPSVEWSPVRAVSGLEESMWRLGLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYN 72 Query: 406 HPRNRALVVGTVTEGVEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGSVSLN 585 HPR+R+ V + G EYPER G+P C+FYLKTGTCKFGA C+FHHP+N GG + VSLN Sbjct: 73 HPRDRSSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLN 132 Query: 586 ANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPAFYQTVQSSLVPS-S 762 GYPLR GE ECSYY+KTGQCKFGI CKFHHPQPAGTS+ A AP FY TVQS VP+ + Sbjct: 133 IYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSLPASAPTFYPTVQSPSVPTPT 192 Query: 763 QHYEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSI 939 Q+ + +W+V RPP++ GSY+QG YG VL P G+VP+P W+ Y Sbjct: 193 QYGGTSTSWRVPRPPVLPGSYVQGPYG-PVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPT 251 Query: 940 IGPGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHC 1119 +G GS YGVTQ+ S+ + G Q E FPERPGQ EC YY+R G C Sbjct: 252 VGAGSVYGVTQLPST-HTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDC 310 Query: 1120 KYGSSCRYHHPPERLMPSTSFVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGT 1299 K+GSSCRYHHP E ++P T+ VLS +GLPLRPG PC+ Y+Q G C+FG TCK+DHP+G Sbjct: 311 KFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLGN 370 Query: 1300 LXXXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITGF-KNSISPRVPXXXXXX 1476 + L DMPVAPYPVG + D I+G K+S S R+P Sbjct: 371 MRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSGNTT 430 Query: 1477 XXXXXXXXXXXXPIL---VNLSGPSSSP 1551 + V LSG SS+P Sbjct: 431 SSSVGLIFSQTGSVSLSDVQLSGQSSAP 458 >ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis vinifera] gi|297736890|emb|CBI26091.3| unnamed protein product [Vitis vinifera] Length = 478 Score = 437 bits (1123), Expect = e-120 Identities = 222/411 (54%), Positives = 261/411 (63%), Gaps = 14/411 (3%) Frame = +1 Query: 265 SQTGLEESMRKLGLDEK-ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVGTV 441 ++TGLEE + +LGL E YPER E +C+YY++TG CGYG RCRFNHPR+R V GTV Sbjct: 26 AETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 85 Query: 442 TEGV-EYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGSVSLNANGYPLRPGEN 618 G E+PER GQPVC+FY+KTGTCKFGA CK+HHP+ GG + V+LN GYPLRPGE Sbjct: 86 RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 145 Query: 619 ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 768 ECSYYVKTG CKFG CKFHHPQP +S P PA Y TVQS VPSSQ Sbjct: 146 ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPTVQSPSVPSSQQ 205 Query: 769 YEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIG 945 Y + V RPPL+ SY G Y VL+P GMVP P W+ Y T +G Sbjct: 206 YGLV----VARPPLLPSSYFHGPYSP-VLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 260 Query: 946 PGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKY 1125 G YG+T +S SAP+YTG Q E FPERPGQPEC YY+R G CK+ Sbjct: 261 SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 320 Query: 1126 GSSCRYHHPPERLMPSTSFVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLX 1305 GSSC+YHHPPE P T+ VLS MGLPLRPGAP C+ Y Q G+C+FGPTCK+DHPMGTL Sbjct: 321 GSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLS 380 Query: 1306 XXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITG-FKNSISPRV 1455 LADMPVAPYPVG + ++I+G K S+S R+ Sbjct: 381 YSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPELISGSSKESLSTRM 431 >emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] Length = 518 Score = 434 bits (1117), Expect = e-119 Identities = 221/411 (53%), Positives = 260/411 (63%), Gaps = 14/411 (3%) Frame = +1 Query: 265 SQTGLEESMRKLGLDEK-ELYPERLSEPNCVYYMRTGSCGYGDRCRFNHPRNRALVVGTV 441 ++TGLEE + LGL E YPER E +C+YY++TG CGYG RCRFNHPR+R V GTV Sbjct: 66 AETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTV 125 Query: 442 TEGV-EYPERDGQPVCKFYLKTGTCKFGAYCKFHHPKNVGGIIGSVSLNANGYPLRPGEN 618 G E+PER GQPVC+FY+KTGTCKFGA CK+HHP+ GG + V+LN GYPLRPGE Sbjct: 126 RPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEK 185 Query: 619 ECSYYVKTGQCKFGIACKFHHPQPAGTSVSAPAPA----------FYQTVQSSLVPSSQH 768 ECSYYVKTG CKFG CKFHHPQP +S P PA Y VQS VPSSQ Sbjct: 186 ECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPXVQSPSVPSSQQ 245 Query: 769 YEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPMP-WNTYXXXXXXXXXXXTHSIIG 945 Y + V RPPL+ SY+ G Y VL+P GMVP P W+ Y T +G Sbjct: 246 YGLV----VARPPLLPSSYIHGPYSP-VLIPPGMVPFPGWSHYPAPVSPVASPSTQPTVG 300 Query: 946 PGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNESTFPERPGQPECIYYVRNGHCKY 1125 G YG+T +S SAP+YTG Q E FPERPGQPEC YY+R G CK+ Sbjct: 301 SGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPECQYYMRTGDCKF 360 Query: 1126 GSSCRYHHPPERLMPSTSFVLSHMGLPLRPGAPPCSLYVQYGVCEFGPTCKYDHPMGTLX 1305 GSSC+YHHPPE P T+ VLS MGLPLRPGAP C+ Y Q G+C+FGPTCK+DHPMGTL Sbjct: 361 GSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLS 420 Query: 1306 XXXXXXXLADMPVAPYPVGXXXXXXXXXXXXXXXQIDVITG-FKNSISPRV 1455 LADMPVAPYPVG + ++I+G K S+S R+ Sbjct: 421 YSPSASSLADMPVAPYPVGSSMGTLAPSSSSSDLRPELISGSSKESLSTRM 471 >ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1| predicted protein [Populus trichocarpa] Length = 477 Score = 429 bits (1104), Expect = e-117 Identities = 216/402 (53%), Positives = 259/402 (64%), Gaps = 22/402 (5%) Frame = +1 Query: 223 METYTK----TQSDPP-----HYSQTGLEESMRKLGLDEKEL-YPERLSEPNCVYYMRTG 372 M+ Y++ +QSDP +TGLEE + +LGL E E YPER +E +C+YY+RTG Sbjct: 1 MDRYSRGQEGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTG 60 Query: 373 SCGYGDRCRFNHPRNRALVVGTVTEG-VEYPERDGQPVCKFYLKTGTCKFGAYCKFHHPK 549 CGYG RCR+NHPR+R V+G G EYPER GQP+C++Y++TGTCKFGA CK+HHPK Sbjct: 61 FCGYGARCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPK 120 Query: 550 NVGGIIGSVSLNANGYPLRPGENECSYYVKTGQCKFGIACKFHHPQPAGTSVSA------ 711 GG VSLN GYPLRPGE EC+YY+KTGQCKFG CKFHHPQP + A Sbjct: 121 QGGGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQ 180 Query: 712 ----PAPAFYQTVQSSLVPSSQHYEVAPNWQVTRPPLISGSYLQGAYGHHVLLPSGMVPM 879 P P Y +VQS VPSSQ Y V V RPPL+ GSY+QG YG +L PS +VP Sbjct: 181 IAPVPGPTLYPSVQSPSVPSSQQYGV----MVARPPLLPGSYVQGPYGPVLLSPS-VVPY 235 Query: 880 P-WNTYXXXXXXXXXXXTHSIIGPGSFYGVTQVSSSAPSYTGXXXXXXXXXXXXXGFQNE 1056 P WN Y T +G GS YG++ +S SAP+YTG Q E Sbjct: 236 PSWNPYPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKE 295 Query: 1057 STFPERPGQPECIYYVRNGHCKYGSSCRYHHPPERLMPSTSFVLSHMGLPLRPGAPPCSL 1236 FPERPGQPEC YY++ G CK+ SSCRYHHPPE ++ ++ VLS +GLPLRPGAP CS Sbjct: 296 HLFPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSH 355 Query: 1237 YVQYGVCEFGPTCKYDHPMGTLXXXXXXXXLADMPVAPYPVG 1362 Y Q G C+FGP CK+DHPMGTL LADMPVAPY VG Sbjct: 356 YTQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVG 397