BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016361
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ...   497   e-138
sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom...   497   e-138
ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|3...   481   e-133
ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, ...   477   e-132
ref|XP_002513274.1| GTP-binding protein lepa, putative [Ricinus ...   476   e-132

>ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis
            vinifera] gi|296082645|emb|CBI21650.3| unnamed protein
            product [Vitis vinifera]
          Length = 680

 Score =  497 bits (1279), Expect = e-138
 Identities = 254/294 (86%), Positives = 270/294 (91%)
 Frame = -2

Query: 956  FAELRDALEKLQLNDAALKFEPETSSAMXXXXXXXXXXXLHMEIVQERLEREYNLNLITT 777
            F +LRDALEKLQLNDAALKFEPETSSAM           LHMEI+QERLEREYNL LITT
Sbjct: 387  FPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITT 446

Query: 776  APSVVYQVNCVNGDTVECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRR 597
            APSVVY+VNC+NGDTVECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRR
Sbjct: 447  APSVVYRVNCINGDTVECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRR 506

Query: 596  GEFKEMKYVTENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDI 417
            GEFKEMK++TENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDI
Sbjct: 507  GEFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDI 566

Query: 416  QINGDRVDPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAI 237
            QING+RV+PLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAI
Sbjct: 567  QINGERVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAI 626

Query: 236  RKDVLSKCYGGDITRXXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 75
            RKDVLSKCYGGDITR      KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 627  RKDVLSKCYGGDITRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680


>sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|147841933|emb|CAN60938.1| hypothetical protein
            VITISV_013255 [Vitis vinifera]
          Length = 680

 Score =  497 bits (1279), Expect = e-138
 Identities = 254/294 (86%), Positives = 270/294 (91%)
 Frame = -2

Query: 956  FAELRDALEKLQLNDAALKFEPETSSAMXXXXXXXXXXXLHMEIVQERLEREYNLNLITT 777
            F +LRDALEKLQLNDAALKFEPETSSAM           LHMEI+QERLEREYNL LITT
Sbjct: 387  FPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITT 446

Query: 776  APSVVYQVNCVNGDTVECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRR 597
            APSVVY+VNC+NGDTVECSNPS LPEPG+R SIEEPYVKIE+LTPK+YIG LMEL QDRR
Sbjct: 447  APSVVYRVNCINGDTVECSNPSLLPEPGKRTSIEEPYVKIEMLTPKDYIGPLMELAQDRR 506

Query: 596  GEFKEMKYVTENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDI 417
            GEFKEMK++TENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSF+GY+ES+L+KLDI
Sbjct: 507  GEFKEMKFITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFLGYKESELIKLDI 566

Query: 416  QINGDRVDPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAI 237
            QING+RV+PLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAI
Sbjct: 567  QINGERVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAI 626

Query: 236  RKDVLSKCYGGDITRXXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 75
            RKDVLSKCYGGDITR      KQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 627  RKDVLSKCYGGDITRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 680


>ref|XP_002300223.1| predicted protein [Populus trichocarpa]
            gi|317411668|sp|B9GHA6.1|GUFP_POPTR RecName:
            Full=Translation factor GUF1 homolog, chloroplastic;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|222847481|gb|EEE85028.1| predicted protein [Populus
            trichocarpa]
          Length = 639

 Score =  481 bits (1238), Expect = e-133
 Identities = 246/294 (83%), Positives = 269/294 (91%)
 Frame = -2

Query: 956  FAELRDALEKLQLNDAALKFEPETSSAMXXXXXXXXXXXLHMEIVQERLEREYNLNLITT 777
            F+ELRDALEKLQLNDAALKFEPETS+AM           LHMEIVQERLEREYNL+LITT
Sbjct: 346  FSELRDALEKLQLNDAALKFEPETSNAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITT 405

Query: 776  APSVVYQVNCVNGDTVECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRR 597
            APSVVY+V+CV+ D VECSNPS LPEPG+R+S+EEP+VKIELLTPK+YIG+LMEL Q+RR
Sbjct: 406  APSVVYRVHCVDDDIVECSNPSLLPEPGKRRSVEEPFVKIELLTPKDYIGTLMELAQERR 465

Query: 596  GEFKEMKYVTENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDI 417
            GEFKEMKY+TENRASITYELPLAEMVGDFFDQLKSRSKGYASMEY+ VGY+ESDL++LDI
Sbjct: 466  GEFKEMKYITENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTVVGYKESDLIRLDI 525

Query: 416  QINGDRVDPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAI 237
            QINGD V+PLATIVHKDKAY+VGRALTQKLKELIPRQMFKVPIQA IGAKVIASE+LSAI
Sbjct: 526  QINGDPVEPLATIVHKDKAYSVGRALTQKLKELIPRQMFKVPIQACIGAKVIASESLSAI 585

Query: 236  RKDVLSKCYGGDITRXXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 75
            RKDVL+KCYGGDI+R      KQA GKKRMKAIGKVDVPQEAFMAVLKLEKEVL
Sbjct: 586  RKDVLAKCYGGDISRKKKLLKKQAAGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 639


>ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
            [Glycine max]
          Length = 689

 Score =  477 bits (1228), Expect = e-132
 Identities = 243/294 (82%), Positives = 268/294 (91%)
 Frame = -2

Query: 956  FAELRDALEKLQLNDAALKFEPETSSAMXXXXXXXXXXXLHMEIVQERLEREYNLNLITT 777
            F +LRDALEKLQLNDAALKFEPETSSAM           LHMEIVQERLEREYNL+LITT
Sbjct: 396  FPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITT 455

Query: 776  APSVVYQVNCVNGDTVECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRR 597
            APSVVY+V+CVNGDTVECSNPS LPEPG+RKSIEEP+VKIE+LTPK+YIGSLMEL Q+RR
Sbjct: 456  APSVVYRVHCVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGSLMELAQERR 515

Query: 596  GEFKEMKYVTENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDI 417
            G+F+EMK++ ENRASITYELPLAEMVGDFFDQLKSRSKGYASMEY+FVGY ES+L+KLDI
Sbjct: 516  GQFREMKFIAENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFVGYTESNLIKLDI 575

Query: 416  QINGDRVDPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAI 237
            +INGD V+PLATIVH DKAY+VGRALT KLKELIPRQMFKVPIQA IG+KVIASEA+SAI
Sbjct: 576  RINGDCVEPLATIVHNDKAYSVGRALTLKLKELIPRQMFKVPIQACIGSKVIASEAISAI 635

Query: 236  RKDVLSKCYGGDITRXXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL 75
            RKDVL+KCYGGDI+R      KQAEGKKRMK+IGKVDVPQEAFMAVLKLEKEV+
Sbjct: 636  RKDVLAKCYGGDISRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 689


>ref|XP_002513274.1| GTP-binding protein lepa, putative [Ricinus communis]
            gi|317411669|sp|B9RHQ5.1|GUFP_RICCO RecName:
            Full=Translation factor GUF1 homolog, chloroplastic;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|223547648|gb|EEF49142.1| GTP-binding protein lepa,
            putative [Ricinus communis]
          Length = 693

 Score =  476 bits (1226), Expect = e-132
 Identities = 243/292 (83%), Positives = 265/292 (90%)
 Frame = -2

Query: 956  FAELRDALEKLQLNDAALKFEPETSSAMXXXXXXXXXXXLHMEIVQERLEREYNLNLITT 777
            F E+RDALEKLQLNDAALKFEPETSSAM           LHMEIVQERLEREYNL+LITT
Sbjct: 390  FPEVRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITT 449

Query: 776  APSVVYQVNCVNGDTVECSNPSALPEPGRRKSIEEPYVKIELLTPKEYIGSLMELTQDRR 597
            APSVVY+VNCV+GDTVECSNPS LPEPG+R+SIEEP VKIE+LTPK+YIG LMEL QDRR
Sbjct: 450  APSVVYRVNCVDGDTVECSNPSLLPEPGKRRSIEEPLVKIEMLTPKDYIGPLMELAQDRR 509

Query: 596  GEFKEMKYVTENRASITYELPLAEMVGDFFDQLKSRSKGYASMEYSFVGYRESDLVKLDI 417
            GEFKEM+++T +RASITYELPLAEMVGDFFDQLKSRSKGYASMEY+F+GY+ESDL+KL+I
Sbjct: 510  GEFKEMRFITNSRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYKESDLIKLEI 569

Query: 416  QINGDRVDPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQATIGAKVIASEALSAI 237
            QINGD V+PLATIVHKDKAY VGRALTQKLKELIPRQMFKVPIQA IG+KVIASEAL AI
Sbjct: 570  QINGDPVEPLATIVHKDKAYPVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALPAI 629

Query: 236  RKDVLSKCYGGDITRXXXXXXKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKE 81
            RKDVL+KCYGGDI+R      KQAEGKKRMKAIGKVDVPQEAFMAVLKLEK+
Sbjct: 630  RKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKK 681