BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016360
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300223.1| predicted protein [Populus trichocarpa] gi|3...   203   1e-50
ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, ...   202   3e-50
ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, ...   201   4e-50
ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ...   200   9e-50
sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom...   200   9e-50

>ref|XP_002300223.1| predicted protein [Populus trichocarpa]
           gi|317411668|sp|B9GHA6.1|GUFP_POPTR RecName:
           Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|222847481|gb|EEE85028.1| predicted protein [Populus
           trichocarpa]
          Length = 639

 Score =  203 bits (517), Expect = 1e-50
 Identities = 100/110 (90%), Positives = 105/110 (95%)
 Frame = +1

Query: 1   RGVIVYFRVIDGTIRKGDRIYFMASGKDYYADEIGVLSPNQLQVDELYAGEVGYLSASIR 180
           RGVIVYFRVIDG I+KGDRIYFMAS KDYYADEIGVLSPNQ+QV+ELYAGEVGYLSASIR
Sbjct: 243 RGVIVYFRVIDGNIKKGDRIYFMASEKDYYADEIGVLSPNQMQVEELYAGEVGYLSASIR 302

Query: 181 SVADARVGDTITQYGRKAVQSLPGYKEATPMVFCGLFPVDADQFAELRDA 330
           SVADARVGDTIT Y RKA QSLPGY+EATPMVFCGLFPVDADQF+ELRDA
Sbjct: 303 SVADARVGDTITHYSRKAEQSLPGYEEATPMVFCGLFPVDADQFSELRDA 352


>ref|XP_003526892.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Glycine max]
          Length = 687

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/110 (88%), Positives = 106/110 (96%)
 Frame = +1

Query: 1   RGVIVYFRVIDGTIRKGDRIYFMASGKDYYADEIGVLSPNQLQVDELYAGEVGYLSASIR 180
           RGVIVYFRV+DGTI+KGDR+YFMASGKDY+ADEIGVLSP+QLQV+ELYAGEVGYLSASIR
Sbjct: 291 RGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPSQLQVEELYAGEVGYLSASIR 350

Query: 181 SVADARVGDTITQYGRKAVQSLPGYKEATPMVFCGLFPVDADQFAELRDA 330
           +VADARVGDTIT YGRKA  SLPGY+EATPMVFCGLFPVDADQF +LRDA
Sbjct: 351 TVADARVGDTITHYGRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDA 400


>ref|XP_003523197.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Glycine max]
          Length = 689

 Score =  201 bits (512), Expect = 4e-50
 Identities = 96/110 (87%), Positives = 106/110 (96%)
 Frame = +1

Query: 1   RGVIVYFRVIDGTIRKGDRIYFMASGKDYYADEIGVLSPNQLQVDELYAGEVGYLSASIR 180
           RGVIVYFRV+DGTI+KGDR+YFMASGKDY+ADEIGVLSP+QLQV+ELYAGEVGYLSASIR
Sbjct: 293 RGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPSQLQVEELYAGEVGYLSASIR 352

Query: 181 SVADARVGDTITQYGRKAVQSLPGYKEATPMVFCGLFPVDADQFAELRDA 330
           +VADARVGDT+T YGRKA  SLPGY+EATPMVFCGLFPVDADQF +LRDA
Sbjct: 353 TVADARVGDTVTHYGRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDA 402


>ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis
           vinifera] gi|296082645|emb|CBI21650.3| unnamed protein
           product [Vitis vinifera]
          Length = 680

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = +1

Query: 1   RGVIVYFRVIDGTIRKGDRIYFMASGKDYYADEIGVLSPNQLQVDELYAGEVGYLSASIR 180
           RGVIVYFRVIDGTI+KGDRIYFMAS KDY+ADEIGVLSPNQLQ DELYAGEVGYL+ASIR
Sbjct: 284 RGVIVYFRVIDGTIKKGDRIYFMASKKDYFADEIGVLSPNQLQADELYAGEVGYLAASIR 343

Query: 181 SVADARVGDTITQYGRKAVQSLPGYKEATPMVFCGLFPVDADQFAELRDA 330
           SVADARVGDTIT YGRKA  SLPGY+EATPMVFCGLFPVDAD+F +LRDA
Sbjct: 344 SVADARVGDTITHYGRKAENSLPGYEEATPMVFCGLFPVDADKFPDLRDA 393


>sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|147841933|emb|CAN60938.1| hypothetical protein
           VITISV_013255 [Vitis vinifera]
          Length = 680

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = +1

Query: 1   RGVIVYFRVIDGTIRKGDRIYFMASGKDYYADEIGVLSPNQLQVDELYAGEVGYLSASIR 180
           RGVIVYFRVIDGTI+KGDRIYFMAS KDY+ADEIGVLSPNQLQ DELYAGEVGYL+ASIR
Sbjct: 284 RGVIVYFRVIDGTIKKGDRIYFMASKKDYFADEIGVLSPNQLQADELYAGEVGYLAASIR 343

Query: 181 SVADARVGDTITQYGRKAVQSLPGYKEATPMVFCGLFPVDADQFAELRDA 330
           SVADARVGDTIT YGRKA  SLPGY+EATPMVFCGLFPVDAD+F +LRDA
Sbjct: 344 SVADARVGDTITHYGRKAENSLPGYEEATPMVFCGLFPVDADKFPDLRDA 393