BLASTX nr result
ID: Coptis25_contig00016356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016356
(712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containi... 303 2e-80
ref|XP_002530468.1| pentatricopeptide repeat-containing protein,... 280 2e-73
ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containi... 271 1e-70
ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group] g... 268 8e-70
gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japo... 268 8e-70
>ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 303 bits (776), Expect = 2e-80
Identities = 146/234 (62%), Positives = 188/234 (80%)
Frame = +1
Query: 10 LIGTLRALSIKTNYEENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFS 189
LIG+LR ++IKT YE +VVVG+AILNAY+R G L+LA FFE MP RNE+SW+TMI+AF+
Sbjct: 379 LIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFA 438
Query: 190 WSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAG 369
RL+DAI +YE +P+ ++ ++TAM+T YAQ G I +AR +F+EI NPNV+ WNA++AG
Sbjct: 439 QCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAG 498
Query: 370 YAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMF 549
Y +NGM EA D+F +MP +NSASWAA+I+ F Q+ +S EAL++L ELH+SG VPSDS F
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 550 TSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVSQV 711
TSAL ACANIG +E+GR +HSL IK GCQ NSYV NGLISMYAKC N+E+ S V
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612
Score = 136 bits (342), Expect = 5e-30
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 39/248 (15%)
Frame = +1
Query: 58 NVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVY---- 225
NVV AI+ Y++ G L A F+ MPV+N SW+ MI+ F + +A+ +
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 226 --EMIPDPS-------------------LVSRTAMLTG--------------YAQNGGIH 300
+P S ++ A+ TG YA+ G +
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Query: 301 EARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQ 480
+ +F I + ++WN++++G ++N M D+A +F +MP+R+ SW A+ISA+ Q+G
Sbjct: 608 DGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGH 667
Query: 481 SEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNG 660
E AL + ++ G+ P+ TS L AC N+GA+++G Q H+L K G +VGN
Sbjct: 668 GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS 727
Query: 661 LISMYAKC 684
LI+MY KC
Sbjct: 728 LITMYFKC 735
Score = 135 bits (341), Expect = 6e-30
Identities = 67/215 (31%), Positives = 124/215 (57%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
+ +VV +++N YS+ G+++ A F+ +N +W+ +++ ++ R+E+A V+E
Sbjct: 199 QRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFES 258
Query: 232 IPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMF 411
+ + ++VS AM++GY QNG + AR+LF+E+P NV +WN++V GY EA ++F
Sbjct: 259 MTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELF 318
Query: 412 SRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALE 591
+MPERNS SW +IS + EA + ++ ++ P S+F L A + LE
Sbjct: 319 DQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLE 378
Query: 592 MGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLE 696
+ L + IK G + + VG+ +++ Y + +L+
Sbjct: 379 LIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLD 413
Score = 96.3 bits (238), Expect = 6e-18
Identities = 48/137 (35%), Positives = 76/137 (55%)
Frame = +1
Query: 142 PVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFE 321
P + F +T I R+E+A V+ + +VS +M+ GY+QNG + EAR LF+
Sbjct: 167 PQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD 226
Query: 322 EIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKM 501
N+ TW ++ GYAK G +EA ++F M ERN SW A+IS + Q+G + A K+
Sbjct: 227 AFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKL 286
Query: 502 LSELHKSGMVPSDSMFT 552
E+ + + +S+ T
Sbjct: 287 FDEMPEKNVASWNSVVT 303
Score = 90.9 bits (224), Expect = 2e-16
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 40/243 (16%)
Frame = +1
Query: 22 LRALSIKTNYEENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNR 201
+ +L+IKT + N V +++ Y++ G + F + V++ SW+++IS S +
Sbjct: 577 IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYM 636
Query: 202 LEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEI------PNPNVIT----- 348
L+DA V+E +P +VS TA+++ Y Q G A LF ++ PN +T
Sbjct: 637 LDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSA 696
Query: 349 ----------------------------WNAMVAGYAKNGMFDEATDMFSRMPERNSASW 444
N+++ Y K G +++ +F MPE + +W
Sbjct: 697 CGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITW 755
Query: 445 AALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMG-RQLHSLTI 621
A++ AQ+G +EA+K+ ++ G++P F L AC++ G ++ G +S+T
Sbjct: 756 NAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQ 815
Query: 622 KAG 630
K G
Sbjct: 816 KYG 818
>ref|XP_002530468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530013|gb|EEF31938.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 801
Score = 280 bits (716), Expect = 2e-73
Identities = 134/234 (57%), Positives = 178/234 (76%)
Frame = +1
Query: 10 LIGTLRALSIKTNYEENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFS 189
+IG+ R L +K YEE+VVV TAILNAY+R G L+ A KFFE+MP RNE+S ++MI+AFS
Sbjct: 236 MIGSFRTLVMKMGYEEDVVVATAILNAYARCGSLDDAFKFFESMPARNEYSLTSMIAAFS 295
Query: 190 WSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAG 369
RL+DAIA+YE +RT ++ Y NG I EA+ +F+EI NPNV+ WNAM+ G
Sbjct: 296 QRGRLDDAIALYEKDSKQGDATRTTIIAAYMHNGRIDEAKHIFDEIVNPNVVAWNAMLGG 355
Query: 370 YAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMF 549
YA+NGM +EA +F +MP RN+ SWAA+I F Q+G +E LK+ +ELH++GM+P+ S F
Sbjct: 356 YAQNGMLEEAKAIFLQMPVRNAVSWAAMIGGFVQNGNGKEGLKLFTELHRTGMIPTHSCF 415
Query: 550 TSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVSQV 711
TSALFACANIG +E+G+Q+HSL+IK CQ N +VGNGLISMYAKC ++E+VS V
Sbjct: 416 TSALFACANIGDVEIGKQIHSLSIKMRCQSNPFVGNGLISMYAKCNSVEDVSHV 469
Score = 128 bits (322), Expect = 1e-27
Identities = 61/216 (28%), Positives = 118/216 (54%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
+ + V ++++ Y + ++ A F+ +N +W+ ++S ++ + +E+A +
Sbjct: 56 QRDAVSWNSMISVYLQNNKIPDAKSLFDAFEYKNVRTWTILLSGYAKAGLIEEAETFFRS 115
Query: 232 IPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMF 411
+P+ ++VS AML G+ QNG + AR+ F E+P NV +WN+++ GY K+G+ EA ++F
Sbjct: 116 MPERNVVSWNAMLAGFVQNGDLRNARKCFYEMPERNVSSWNSIITGYCKSGLMKEARELF 175
Query: 412 SRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALE 591
RM ER+S SW + S + + Q E + + SG+ P ++F L A L
Sbjct: 176 DRMEERSSVSWMVMASGYVEISQYREGWCVFLMMMNSGVRPDQAVFVVGLSAIMGFNDLG 235
Query: 592 MGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLEN 699
M +L +K G + + V +++ YA+C +L++
Sbjct: 236 MIGSFRTLVMKMGYEEDVVVATAILNAYARCGSLDD 271
Score = 126 bits (317), Expect = 4e-27
Identities = 73/254 (28%), Positives = 123/254 (48%), Gaps = 39/254 (15%)
Frame = +1
Query: 58 NVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYE--- 228
NVV A+L Y++ G L A F MPVRN SW+ MI F + ++ + ++
Sbjct: 345 NVVAWNAMLGGYAQNGMLEEAKAIFLQMPVRNAVSWAAMIGGFVQNGNGKEGLKLFTELH 404
Query: 229 ---MIPDPSLVSRT---------------------------------AMLTGYAQNGGIH 300
MIP S + +++ YA+ +
Sbjct: 405 RTGMIPTHSCFTSALFACANIGDVEIGKQIHSLSIKMRCQSNPFVGNGLISMYAKCNSVE 464
Query: 301 EARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQ 480
+ +F + + ++WN++V+G + N + ++A + F MP R++ SWAA+ISA + Q
Sbjct: 465 DVSHVFNSMNVRDTVSWNSLVSGLSWNYLLNDAQNTFDNMPTRDAVSWAAIISAHVHADQ 524
Query: 481 SEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNG 660
E A ++ ++ +G+ P+D TS L AC N+G ++G Q H+L +K G +V N
Sbjct: 525 GEIAWQLFLDMLSAGLKPNDLTITSLLSACGNLGVTKLGEQFHALVLKHGFNSCLHVCNA 584
Query: 661 LISMYAKCRNLENV 702
LISMY KC N++ +
Sbjct: 585 LISMYFKCGNVDGL 598
Score = 86.7 bits (213), Expect = 4e-15
Identities = 45/137 (32%), Positives = 73/137 (53%)
Frame = +1
Query: 142 PVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFE 321
P + F + I R++DA +++ +P VS +M++ Y QN I +A+ LF+
Sbjct: 24 PQAHLFQCNKKIQELGKLGRVKDARHLFDTMPQRDAVSWNSMISVYLQNNKIPDAKSLFD 83
Query: 322 EIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKM 501
NV TW +++GYAK G+ +EA F MPERN SW A+++ F Q+G A K
Sbjct: 84 AFEYKNVRTWTILLSGYAKAGLIEEAETFFRSMPERNVVSWNAMLAGFVQNGDLRNARKC 143
Query: 502 LSELHKSGMVPSDSMFT 552
E+ + + +S+ T
Sbjct: 144 FYEMPERNVSSWNSIIT 160
Score = 75.9 bits (185), Expect = 8e-12
Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Frame = +1
Query: 22 LRALSIKTNYEENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNR 201
+ +LSIK + N VG +++ Y++ + F +M VR+ SW++++S SW+
Sbjct: 434 IHSLSIKMRCQSNPFVGNGLISMYAKCNSVEDVSHVFNSMNVRDTVSWNSLVSGLSWNYL 493
Query: 202 LEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEI------PNPNVIT----- 348
L DA ++ +P VS A+++ + A +LF ++ PN IT
Sbjct: 494 LNDAQNTFDNMPTRDAVSWAAIISAHVHADQGEIAWQLFLDMLSAGLKPNDLTITSLLSA 553
Query: 349 ----------------------------WNAMVAGYAKNGMFDEATDMFSRMPERNSASW 444
NA+++ Y K G D +F M +R+ +W
Sbjct: 554 CGNLGVTKLGEQFHALVLKHGFNSCLHVCNALISMYFKCGNVD-GLYVFEEMIDRDIVTW 612
Query: 445 AALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGAL 588
+++ AQ+G +EA K+ ++ ++ + P + F L AC++ G +
Sbjct: 613 NTVLAGCAQNGLCKEATKVFEQMAEAEVFPDEISFLGVLSACSHAGGI 660
>ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 271 bits (692), Expect = 1e-70
Identities = 134/235 (57%), Positives = 178/235 (75%), Gaps = 1/235 (0%)
Frame = +1
Query: 10 LIGTLRALSIKTNYEENVVVGTAILNAYSR-TGRLNLACKFFENMPVRNEFSWSTMISAF 186
++ LR L +KT +E +VV+GT+ILN Y+R L++A KFF+ M RNE++WSTMI+A
Sbjct: 241 VLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAAL 300
Query: 187 SWSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVA 366
S R++ AIAVY P S+ S+TA+LTG A+ G I EAR LFE+IP+P V++WNAM+
Sbjct: 301 SHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMIT 360
Query: 367 GYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSM 546
GY +NGM DEA ++F RMP RN+ SWA +I+ +AQ+G+SEEAL +L LH++GM+PS S
Sbjct: 361 GYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSS 420
Query: 547 FTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVSQV 711
TS+ AC++IGALE GRQ+HSL +KAGCQ NSYV N LISMY KCRN+E V QV
Sbjct: 421 LTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQV 475
Score = 117 bits (293), Expect = 2e-24
Identities = 68/234 (29%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Frame = +1
Query: 73 TAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMI------ 234
+A + +R GRL A + F+ MP R+ +W++MISA+ S LEDA +++ I
Sbjct: 37 SARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGNVR 96
Query: 235 -------------------------PDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPN 339
P+ + V+ AM++ Y QNG I ARRLF+ +P+ +
Sbjct: 97 TATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRD 156
Query: 340 VITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHK 519
V +WN+MV GY + +A ++F +MP+RN +W +IS + + Q + + +H
Sbjct: 157 VTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHH 216
Query: 520 SGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAK 681
G P S F S L A + L + L L +K G + + +G ++++Y +
Sbjct: 217 EGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTR 270
Score = 112 bits (280), Expect = 7e-23
Identities = 64/247 (25%), Positives = 118/247 (47%), Gaps = 39/247 (15%)
Frame = +1
Query: 61 VVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMIPD 240
VV A++ Y + G ++ A + F+ MP RN SW+ MI+ ++ + R E+A+ + + +
Sbjct: 352 VVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHR 411
Query: 241 ----PSLVSRT-----------------------------------AMLTGYAQNGGIHE 303
PSL S T A+++ Y + +
Sbjct: 412 NGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEY 471
Query: 304 ARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQS 483
R++F + + ++WN+ +A +N M ++A +F M R+ SW +ISA+AQ+ +
Sbjct: 472 VRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERG 531
Query: 484 EEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGL 663
+EA++ + P+ + T L C +G+ ++G+Q+H++ IK G V N L
Sbjct: 532 DEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANAL 591
Query: 664 ISMYAKC 684
+SMY KC
Sbjct: 592 MSMYFKC 598
Score = 82.0 bits (201), Expect = 1e-13
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 39/233 (16%)
Frame = +1
Query: 22 LRALSIKTNYEENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNR 201
+ +L++K + N V A+++ Y + + + F M V++ SW++ I+A +N
Sbjct: 440 VHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNM 499
Query: 202 LEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFE------EIPNPNVITW---- 351
LEDA +++ + +VS T +++ YAQ EA F+ E PN ++T
Sbjct: 500 LEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSV 559
Query: 352 -----------------------------NAMVAGYAKNGMFDEATDMFSRMPERNSASW 444
NA+++ Y K G D + +F M ER+ +W
Sbjct: 560 CGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTW 618
Query: 445 AALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQ 603
I+ AQ G EA+KM + G++P++ F L AC++ G ++ G Q
Sbjct: 619 NTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQ 671
Score = 65.1 bits (157), Expect = 1e-08
Identities = 54/247 (21%), Positives = 107/247 (43%), Gaps = 42/247 (17%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
E N V A+++ Y + G + +A + F+ MP R+ SW++M++ + S ++ DA +++
Sbjct: 123 ERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQ 182
Query: 232 IPDPSLVSRTAMLTGYA---QNG-GIHEARRLFEEIPNP--------------------- 336
+P +LV+ T M++GY Q+G G R + E +P
Sbjct: 183 MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVL 242
Query: 337 --------------NVITWNAMVAGYAKN-GMFDEATDMFSRMPERNSASWAALISAFAQ 471
+V+ +++ Y ++ D A F M ERN +W+ +I+A +
Sbjct: 243 EVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSH 302
Query: 472 SGQSEEALKMLSELHKSGMVPSDSMFTSALFACANI-GALEMGRQL-HSLTIKAGCQCNS 645
G+ + A+ + +PS + + L C I A + Q+ + +
Sbjct: 303 GGRIDAAIAVYGR-DPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITG 361
Query: 646 YVGNGLI 666
Y+ NG++
Sbjct: 362 YMQNGMV 368
Score = 59.3 bits (142), Expect = 7e-07
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Frame = +1
Query: 253 SRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSR----- 417
+ +A + A+ G + EAR +F+ +P+ ++I WN+M++ Y +GM ++A +F
Sbjct: 35 AHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGGN 94
Query: 418 --------------------------MPERNSASWAALISAFAQSGQSEEALKMLSELHK 519
MPERN+ +W A++S + Q+G A ++ +
Sbjct: 95 VRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPS 154
Query: 520 SGMVPSDSMFTSALFACANIGALEMGRQL 606
+ +SM T + + A + +Q+
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQM 183
>ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|218190072|gb|EEC72499.1| hypothetical protein
OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa
Japonica Group]
Length = 922
Score = 268 bits (685), Expect = 8e-70
Identities = 132/235 (56%), Positives = 176/235 (74%), Gaps = 1/235 (0%)
Frame = +1
Query: 10 LIGTLRALSIKTNYEENVVVGTAILNAYSR-TGRLNLACKFFENMPVRNEFSWSTMISAF 186
++ +LR L++KT +E +VV+GTAILN YSR T L+ A KFFE+M RNE++WSTMI+A
Sbjct: 242 VLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAAL 301
Query: 187 SWSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVA 366
S R++ AIAVYE P S+ RTA++TG AQ G I +AR LFE+IP P V++WNA++
Sbjct: 302 SHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALIT 361
Query: 367 GYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSM 546
GY +NGM +EA ++F +MP RN+ SWA +I+ +AQ+G+SEEAL +L ELH+SGM+PS S
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 547 FTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVSQV 711
TS FAC+NI ALE G Q+HSL +K GCQ NS+ N LI+MY KCRN+E QV
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Score = 124 bits (311), Expect = 2e-26
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 39/250 (15%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
E VV A++ Y + G +N A + F+ MP RN SW+ MI+ ++ + R E+A+ + +
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 232 IPD----PSLVSRT-----------------------------------AMLTGYAQNGG 294
+ PSL S T A++T Y +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 295 IHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQS 474
+ AR++F + ++++WN+ +A +N + DEA + F M R+ SW +ISA+A +
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529
Query: 475 GQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVG 654
QS EA+ + +P+ + T L C ++GA ++G+Q+H++ IK G V
Sbjct: 530 EQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVA 589
Query: 655 NGLISMYAKC 684
N LISMY KC
Sbjct: 590 NALISMYFKC 599
Score = 119 bits (298), Expect = 6e-25
Identities = 58/208 (27%), Positives = 119/208 (57%)
Frame = +1
Query: 58 NVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMIP 237
+++ ++++AY G + A ++ + N + + ++S + R+ +A V++ +
Sbjct: 64 DIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGML 123
Query: 238 DPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSR 417
+ + V+ AM++ Y QNG I ARRLF+ +P+ +V +WN+M+ GY + +A ++F +
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEK 183
Query: 418 MPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMG 597
MPERN SW +IS + + +A + ++H+ G++P S F SAL A +G L++
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 598 RQLHSLTIKAGCQCNSYVGNGLISMYAK 681
L L +K G + + +G ++++Y++
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSR 271
Score = 75.9 bits (185), Expect = 8e-12
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Frame = +1
Query: 55 ENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMI 234
+++V + L A + L+ A F+NM R++ SW+T+ISA++ + + +A+ ++ +
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 235 PDPSLVSRTAMLTGYAQNGGIHEARRLFEEIP--------NPNVITWNAMVAGYAKNGMF 390
+ + +LT G A ++ ++I + +I NA+++ Y K G
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCA 602
Query: 391 DEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFAC 570
D +F M ER+ +W +I+ +AQ G EA+KM + +G++P++ F L AC
Sbjct: 603 DSRR-IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661
Query: 571 ANIGALEMG 597
++ G ++ G
Sbjct: 662 SHAGLVDEG 670
Score = 68.2 bits (165), Expect = 2e-09
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
E N V A+++ Y + G + +A + F+ MP R+ SW++M++ + S ++ DA ++E
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEK 183
Query: 232 IPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNP------------------------- 336
+P+ +LVS T M++GY + +A +F ++
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 337 --------------NVITWNAMVAGYAKN-GMFDEATDMFSRMPERNSASWAALISAFAQ 471
+V+ A++ Y+++ + D A F M ERN +W+ +I+A +
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSH 303
Query: 472 SGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQL-----HSLTIKAGCQ 636
G+ + A+ +++ V S + T+ + A G ++ R L + +
Sbjct: 304 GGRIDAAI----AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNAL 359
Query: 637 CNSYVGNGLIS 669
Y+ NG+++
Sbjct: 360 ITGYMQNGMVN 370
Score = 63.9 bits (154), Expect = 3e-08
Identities = 34/118 (28%), Positives = 63/118 (53%)
Frame = +1
Query: 199 RLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAK 378
R+ +A V++ +P +++ +M++ Y NG AR L++ I N+ T +++GY +
Sbjct: 49 RVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR 108
Query: 379 NGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFT 552
G EA +F M ERN+ +W A+IS + Q+G A ++ + + +SM T
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLT 166
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 259 TAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSA 438
+A + + G + EAR +F+ +P ++I WN+M++ Y NGM D A D++ + N
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 439 SWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFAC-ANIGALEMGRQL 606
+ A L+S + + G+ EA ++ GM+ +++ +A+ +C G + M R+L
Sbjct: 98 TGAILLSGYGRLGRVLEARRVF-----DGMLERNTVAWNAMISCYVQNGDITMARRL 149
>gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 268 bits (685), Expect = 8e-70
Identities = 132/235 (56%), Positives = 176/235 (74%), Gaps = 1/235 (0%)
Frame = +1
Query: 10 LIGTLRALSIKTNYEENVVVGTAILNAYSR-TGRLNLACKFFENMPVRNEFSWSTMISAF 186
++ +LR L++KT +E +VV+GTAILN YSR T L+ A KFFE+M RNE++WSTMI+A
Sbjct: 242 VLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAAL 301
Query: 187 SWSNRLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVA 366
S R++ AIAVYE P S+ RTA++TG AQ G I +AR LFE+IP P V++WNA++
Sbjct: 302 SHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALIT 361
Query: 367 GYAKNGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSM 546
GY +NGM +EA ++F +MP RN+ SWA +I+ +AQ+G+SEEAL +L ELH+SGM+PS S
Sbjct: 362 GYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSS 421
Query: 547 FTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVGNGLISMYAKCRNLENVSQV 711
TS FAC+NI ALE G Q+HSL +K GCQ NS+ N LI+MY KCRN+E QV
Sbjct: 422 LTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Score = 124 bits (311), Expect = 2e-26
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 39/250 (15%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
E VV A++ Y + G +N A + F+ MP RN SW+ MI+ ++ + R E+A+ + +
Sbjct: 350 EPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQE 409
Query: 232 IPD----PSLVSRT-----------------------------------AMLTGYAQNGG 294
+ PSL S T A++T Y +
Sbjct: 410 LHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRN 469
Query: 295 IHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSASWAALISAFAQS 474
+ AR++F + ++++WN+ +A +N + DEA + F M R+ SW +ISA+A +
Sbjct: 470 MEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHA 529
Query: 475 GQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQLHSLTIKAGCQCNSYVG 654
QS EA+ + +P+ + T L C ++GA ++G+Q+H++ IK G V
Sbjct: 530 EQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVA 589
Query: 655 NGLISMYAKC 684
N LISMY KC
Sbjct: 590 NALISMYFKC 599
Score = 119 bits (298), Expect = 6e-25
Identities = 58/208 (27%), Positives = 119/208 (57%)
Frame = +1
Query: 58 NVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMIP 237
+++ ++++AY G + A ++ + N + + ++S + R+ +A V++ +
Sbjct: 64 DIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGML 123
Query: 238 DPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSR 417
+ + V+ AM++ Y QNG I ARRLF+ +P+ +V +WN+M+ GY + +A ++F +
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEK 183
Query: 418 MPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMG 597
MPERN SW +IS + + +A + ++H+ G++P S F SAL A +G L++
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 598 RQLHSLTIKAGCQCNSYVGNGLISMYAK 681
L L +K G + + +G ++++Y++
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSR 271
Score = 75.9 bits (185), Expect = 8e-12
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Frame = +1
Query: 55 ENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEMI 234
+++V + L A + L+ A F+NM R++ SW+T+ISA++ + + +A+ ++ +
Sbjct: 483 KDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Query: 235 PDPSLVSRTAMLTGYAQNGGIHEARRLFEEIP--------NPNVITWNAMVAGYAKNGMF 390
+ + +LT G A ++ ++I + +I NA+++ Y K G
Sbjct: 543 FCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCA 602
Query: 391 DEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFAC 570
D +F M ER+ +W +I+ +AQ G EA+KM + +G++P++ F L AC
Sbjct: 603 DSRR-IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661
Query: 571 ANIGALEMG 597
++ G ++ G
Sbjct: 662 SHAGLVDEG 670
Score = 68.2 bits (165), Expect = 2e-09
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Frame = +1
Query: 52 EENVVVGTAILNAYSRTGRLNLACKFFENMPVRNEFSWSTMISAFSWSNRLEDAIAVYEM 231
E N V A+++ Y + G + +A + F+ MP R+ SW++M++ + S ++ DA ++E
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEK 183
Query: 232 IPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNP------------------------- 336
+P+ +LVS T M++GY + +A +F ++
Sbjct: 184 MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVL 243
Query: 337 --------------NVITWNAMVAGYAKN-GMFDEATDMFSRMPERNSASWAALISAFAQ 471
+V+ A++ Y+++ + D A F M ERN +W+ +I+A +
Sbjct: 244 ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSH 303
Query: 472 SGQSEEALKMLSELHKSGMVPSDSMFTSALFACANIGALEMGRQL-----HSLTIKAGCQ 636
G+ + A+ +++ V S + T+ + A G ++ R L + +
Sbjct: 304 GGRIDAAI----AVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNAL 359
Query: 637 CNSYVGNGLIS 669
Y+ NG+++
Sbjct: 360 ITGYMQNGMVN 370
Score = 63.9 bits (154), Expect = 3e-08
Identities = 34/118 (28%), Positives = 63/118 (53%)
Frame = +1
Query: 199 RLEDAIAVYEMIPDPSLVSRTAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAK 378
R+ +A V++ +P +++ +M++ Y NG AR L++ I N+ T +++GY +
Sbjct: 49 RVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGR 108
Query: 379 NGMFDEATDMFSRMPERNSASWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFT 552
G EA +F M ERN+ +W A+IS + Q+G A ++ + + +SM T
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLT 166
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 259 TAMLTGYAQNGGIHEARRLFEEIPNPNVITWNAMVAGYAKNGMFDEATDMFSRMPERNSA 438
+A + + G + EAR +F+ +P ++I WN+M++ Y NGM D A D++ + N
Sbjct: 38 SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97
Query: 439 SWAALISAFAQSGQSEEALKMLSELHKSGMVPSDSMFTSALFAC-ANIGALEMGRQL 606
+ A L+S + + G+ EA ++ GM+ +++ +A+ +C G + M R+L
Sbjct: 98 TGAILLSGYGRLGRVLEARRVF-----DGMLERNTVAWNAMISCYVQNGDITMARRL 149