BLASTX nr result

ID: Coptis25_contig00016353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016353
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512188.1| molybdopterin cofactor synthesis protein A, ...    96   3e-18
ref|XP_002314219.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
emb|CBI32161.3| unnamed protein product [Vitis vinifera]               91   7e-17
ref|XP_002267864.1| PREDICTED: molybdopterin biosynthesis protei...    91   7e-17
ref|XP_002881206.1| hypothetical protein ARALYDRAFT_482122 [Arab...    91   1e-16

>ref|XP_002512188.1| molybdopterin cofactor synthesis protein A, putative [Ricinus
           communis] gi|223548732|gb|EEF50222.1| molybdopterin
           cofactor synthesis protein A, putative [Ricinus
           communis]
          Length = 390

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 57/103 (55%), Positives = 65/103 (63%), Gaps = 24/103 (23%)
 Frame = -1

Query: 239 NISSSDDMLVDSFGRLHTYLRISLTE-------VAISDANTVCTPNPSLL---------- 111
           N +S  DML+DSFGR+HTYLRISLTE         +       TPNP LL          
Sbjct: 58  NTNSISDMLIDSFGRMHTYLRISLTERCNLRCQYCMPSEGVELTPNPQLLSQKEIVRLAN 117

Query: 110 ----SGVDKIRLTGGEPTIRRD---ICLQLSNLKGLETLAITT 3
               SGVDKIRLTGGEPTIR+D   ICL+LSNLKGL+ LA+TT
Sbjct: 118 LFVSSGVDKIRLTGGEPTIRKDIEEICLELSNLKGLKMLAMTT 160


>ref|XP_002314219.1| predicted protein [Populus trichocarpa] gi|222850627|gb|EEE88174.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/106 (54%), Positives = 69/106 (65%), Gaps = 24/106 (22%)
 Frame = -1

Query: 248 VATNISSSDDMLVDSFGRLHTYLRISLTE-------VAISDANTVCTPNPSLL------- 111
           ++TN++S  DML+DSFGR+HTYLRISLTE         +       T +P LL       
Sbjct: 22  MSTNLAS--DMLIDSFGRMHTYLRISLTERCNLRCQYCMPAEGVELTRSPQLLSQDEIVH 79

Query: 110 -------SGVDKIRLTGGEPTIRR---DICLQLSNLKGLETLAITT 3
                  SGVDKIRLTGGEPTIR+   DICLQLSNLKGL+TLA+TT
Sbjct: 80  LANLFVSSGVDKIRLTGGEPTIRKDIEDICLQLSNLKGLKTLAMTT 125


>emb|CBI32161.3| unnamed protein product [Vitis vinifera]
          Length = 468

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 57/97 (58%), Positives = 61/97 (62%), Gaps = 24/97 (24%)
 Frame = -1

Query: 221 DMLVDSFGRLHTYLRISLTE-------VAISDANTVCTPNPSLLS--------------G 105
           DMLVDSFGR HTYLRISLTE         +       TPNP LLS              G
Sbjct: 142 DMLVDSFGRRHTYLRISLTERCNLRCMYCMPAEGVELTPNPQLLSQNEIVRLANLFVSSG 201

Query: 104 VDKIRLTGGEPTIRRD---ICLQLSNLKGLETLAITT 3
           VDKIRLTGGEPTIR+D   IC QLS+LKGL+TLAITT
Sbjct: 202 VDKIRLTGGEPTIRKDIEEICSQLSSLKGLKTLAITT 238


>ref|XP_002267864.1| PREDICTED: molybdopterin biosynthesis protein CNX2-like [Vitis
           vinifera]
          Length = 373

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 57/97 (58%), Positives = 61/97 (62%), Gaps = 24/97 (24%)
 Frame = -1

Query: 221 DMLVDSFGRLHTYLRISLTE-------VAISDANTVCTPNPSLLS--------------G 105
           DMLVDSFGR HTYLRISLTE         +       TPNP LLS              G
Sbjct: 47  DMLVDSFGRRHTYLRISLTERCNLRCMYCMPAEGVELTPNPQLLSQNEIVRLANLFVSSG 106

Query: 104 VDKIRLTGGEPTIRRD---ICLQLSNLKGLETLAITT 3
           VDKIRLTGGEPTIR+D   IC QLS+LKGL+TLAITT
Sbjct: 107 VDKIRLTGGEPTIRKDIEEICSQLSSLKGLKTLAITT 143


>ref|XP_002881206.1| hypothetical protein ARALYDRAFT_482122 [Arabidopsis lyrata subsp.
           lyrata] gi|297327045|gb|EFH57465.1| hypothetical protein
           ARALYDRAFT_482122 [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 57/104 (54%), Positives = 62/104 (59%), Gaps = 24/104 (23%)
 Frame = -1

Query: 242 TNISSSDDMLVDSFGRLHTYLRISLTE-------VAISDANTVCTPNPSLLS-------- 108
           T  S   DML+DSFGRLHTYLRISLTE         +       TP P LLS        
Sbjct: 56  TKDSPVSDMLIDSFGRLHTYLRISLTERCNLRCQYCMPSEGVELTPKPQLLSQSEIVRLA 115

Query: 107 ------GVDKIRLTGGEPTIRRD---ICLQLSNLKGLETLAITT 3
                 GV+KIRLTGGEPTIR D   ICLQLS+LKGL+ LAITT
Sbjct: 116 GLFVSAGVNKIRLTGGEPTIRNDIEEICLQLSSLKGLKNLAITT 159


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