BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016346
         (2704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [...   504   e-140
ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g...   503   e-140
gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK...   501   e-139
gb|ACJ84777.1| unknown [Medicago truncatula]                          501   e-139
ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [...   500   e-139

>ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
            gi|297743547|emb|CBI36414.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  504 bits (1297), Expect = e-140
 Identities = 251/356 (70%), Positives = 294/356 (82%), Gaps = 1/356 (0%)
 Frame = +1

Query: 967  MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQPEKVFEIHAH-EESCRAVR 1143
            MEI+LGKLPFD+DFHPS+ L+ AGLI GDLHLYRY A  + P+++ E+HAH +ESCRAVR
Sbjct: 1    MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGA-NSLPQRLLEVHAHGDESCRAVR 59

Query: 1144 FINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCIK 1323
            FIN G AI+T SPD SILATDV+TG+ IARL+++H AA+NRL+NLTETTIASGDD GCIK
Sbjct: 60   FINEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIK 119

Query: 1324 VWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSED 1503
            VWDTRQ++CCNSFD+HEEYISDMT+A+DS+KLLG SGDGTLSVC+LR+NKV  QSEFSED
Sbjct: 120  VWDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSED 179

Query: 1504 EPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITG 1683
            E LS+V+MKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDEDRVITG
Sbjct: 180  ELLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITG 239

Query: 1684 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQG 1863
            +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDLLQG
Sbjct: 240  SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQG 299

Query: 1864 SSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031
            S    RSQ A+A            ++                 +AL++S++FFADL
Sbjct: 300  SGSTLRSQEAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346


>ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula]
            gi|355510141|gb|AES91283.1| WD-40 repeat protein
            [Medicago truncatula]
          Length = 420

 Score =  503 bits (1296), Expect = e-140
 Identities = 245/359 (68%), Positives = 290/359 (80%), Gaps = 4/359 (1%)
 Frame = +1

Query: 967  MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140
            MEI+LGKL FD+DFHPS  L+ +GLI GDLHLYRY++  T   P +V E+HAH ESCRA 
Sbjct: 62   MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 121

Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320
            RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI
Sbjct: 122  RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 181

Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500
            KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV  QSEFSE
Sbjct: 182  KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 241

Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680
            DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SNSID +LKLDEDR+IT
Sbjct: 242  DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIIT 301

Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860
            G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ
Sbjct: 302  GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 361

Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031
            GS    R+++ V                N                  A+  SNNFFADL
Sbjct: 362  GSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFADL 420


>gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown
            [Medicago truncatula]
          Length = 359

 Score =  501 bits (1289), Expect = e-139
 Identities = 244/359 (67%), Positives = 289/359 (80%), Gaps = 4/359 (1%)
 Frame = +1

Query: 967  MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140
            MEI+LGKL FD+DFHPS  L+ +GLI GDLHLYRY++  T   P +V E+HAH ESCRA 
Sbjct: 1    MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60

Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320
            RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI
Sbjct: 61   RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120

Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500
            KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV  QSEFSE
Sbjct: 121  KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180

Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680
            DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SNSID +LKLDE R+IT
Sbjct: 181  DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240

Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860
            G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ
Sbjct: 241  GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 300

Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031
            GS    R+++ V                N                  A+  SNNFFADL
Sbjct: 301  GSRSTQRNETGVVANDGDSDDGDEMDVDNSAFKFFKGNRRKNASNGHAVGDSNNFFADL 359


>gb|ACJ84777.1| unknown [Medicago truncatula]
          Length = 359

 Score =  501 bits (1289), Expect = e-139
 Identities = 244/359 (67%), Positives = 289/359 (80%), Gaps = 4/359 (1%)
 Frame = +1

Query: 967  MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140
            MEI+LGKL FD+DFHPS  L+ +GLI GDLHLYRY++  T   P +V E+HAH ESCRA 
Sbjct: 1    MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60

Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320
            RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI
Sbjct: 61   RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120

Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500
            KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV  QSEFSE
Sbjct: 121  KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180

Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680
            DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF    SNSID +LKLDE R+IT
Sbjct: 181  DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240

Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860
            G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ
Sbjct: 241  GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 300

Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031
            GS    R+++ V                N                  A+  SNNFFADL
Sbjct: 301  GSRSTQRNETGVVANDGDSDDGDEMDVDNSAFKFSKGNRRKNASNGHAVGDSNNFFADL 359


>ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera]
            gi|298205166|emb|CBI17225.3| unnamed protein product
            [Vitis vinifera]
          Length = 346

 Score =  500 bits (1287), Expect = e-139
 Identities = 251/356 (70%), Positives = 293/356 (82%), Gaps = 1/356 (0%)
 Frame = +1

Query: 967  MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQPEKVFEIHAH-EESCRAVR 1143
            MEI+LGKLPFD+DFHPS+ L+ AGLI GDLHLYRY A  + P+++ E+HAH EESCRAVR
Sbjct: 1    MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGA-NSLPQRLLEVHAHGEESCRAVR 59

Query: 1144 FINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCIK 1323
            FIN G AI+T SPD SILATDV+TG+ IARL+++H AA++RL+NLTETTIASGDD GCIK
Sbjct: 60   FINKGHAIVTGSPDRSILATDVETGSAIARLEHSHGAAISRLINLTETTIASGDDEGCIK 119

Query: 1324 VWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSED 1503
            VWDTRQ++CCNSFDAHEEYISDMT+A+DS+KLLG SGDGTLSVC+LR+NKV  QSEFSED
Sbjct: 120  VWDTRQQSCCNSFDAHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSED 179

Query: 1504 EPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITG 1683
            E LS+VLMKNGRKVICGTQ+G LLLYSWG+FKDCSDRF     NS+D LLKLDED VITG
Sbjct: 180  ELLSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSVITG 239

Query: 1684 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQG 1863
            +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDLLQG
Sbjct: 240  SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQG 299

Query: 1864 SSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031
            S    RS+ A+A            ++                 +AL++S++FFADL
Sbjct: 300  SGSTLRSREAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346