BLASTX nr result
ID: Coptis25_contig00016346
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016346 (2704 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [... 504 e-140 ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] g... 503 e-140 gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK... 501 e-139 gb|ACJ84777.1| unknown [Medicago truncatula] 501 e-139 ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [... 500 e-139 >ref|XP_002271081.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera] gi|297743547|emb|CBI36414.3| unnamed protein product [Vitis vinifera] Length = 346 Score = 504 bits (1297), Expect = e-140 Identities = 251/356 (70%), Positives = 294/356 (82%), Gaps = 1/356 (0%) Frame = +1 Query: 967 MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQPEKVFEIHAH-EESCRAVR 1143 MEI+LGKLPFD+DFHPS+ L+ AGLI GDLHLYRY A + P+++ E+HAH +ESCRAVR Sbjct: 1 MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGA-NSLPQRLLEVHAHGDESCRAVR 59 Query: 1144 FINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCIK 1323 FIN G AI+T SPD SILATDV+TG+ IARL+++H AA+NRL+NLTETTIASGDD GCIK Sbjct: 60 FINEGHAIVTGSPDLSILATDVETGSAIARLEHSHGAAINRLINLTETTIASGDDEGCIK 119 Query: 1324 VWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSED 1503 VWDTRQ++CCNSFD+HEEYISDMT+A+DS+KLLG SGDGTLSVC+LR+NKV QSEFSED Sbjct: 120 VWDTRQQSCCNSFDSHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSED 179 Query: 1504 EPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITG 1683 E LS+V+MKNGRKVICGTQ+G LLLYSWG+FKDCSDRF NS+D LLKLDEDRVITG Sbjct: 180 ELLSVVIMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDRVITG 239 Query: 1684 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQG 1863 +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDLLQG Sbjct: 240 SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQG 299 Query: 1864 SSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031 S RSQ A+A ++ +AL++S++FFADL Sbjct: 300 SGSTLRSQEAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346 >ref|XP_003609086.1| WD-40 repeat protein [Medicago truncatula] gi|355510141|gb|AES91283.1| WD-40 repeat protein [Medicago truncatula] Length = 420 Score = 503 bits (1296), Expect = e-140 Identities = 245/359 (68%), Positives = 290/359 (80%), Gaps = 4/359 (1%) Frame = +1 Query: 967 MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140 MEI+LGKL FD+DFHPS L+ +GLI GDLHLYRY++ T P +V E+HAH ESCRA Sbjct: 62 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 121 Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320 RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI Sbjct: 122 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 181 Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500 KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV QSEFSE Sbjct: 182 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 241 Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680 DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF SNSID +LKLDEDR+IT Sbjct: 242 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEDRIIT 301 Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860 G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ Sbjct: 302 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 361 Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031 GS R+++ V N A+ SNNFFADL Sbjct: 362 GSRSTQRNETGVVANDGDSDDGDEMDVDNSASKFSKGNKRKNASNGHAVGDSNNFFADL 420 >gb|AFK42119.1| unknown [Medicago truncatula] gi|388510080|gb|AFK43106.1| unknown [Medicago truncatula] Length = 359 Score = 501 bits (1289), Expect = e-139 Identities = 244/359 (67%), Positives = 289/359 (80%), Gaps = 4/359 (1%) Frame = +1 Query: 967 MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140 MEI+LGKL FD+DFHPS L+ +GLI GDLHLYRY++ T P +V E+HAH ESCRA Sbjct: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60 Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320 RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI Sbjct: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120 Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500 KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV QSEFSE Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180 Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680 DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF SNSID +LKLDE R+IT Sbjct: 181 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240 Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860 G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ Sbjct: 241 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 300 Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031 GS R+++ V N A+ SNNFFADL Sbjct: 301 GSRSTQRNETGVVANDGDSDDGDEMDVDNSAFKFFKGNRRKNASNGHAVGDSNNFFADL 359 >gb|ACJ84777.1| unknown [Medicago truncatula] Length = 359 Score = 501 bits (1289), Expect = e-139 Identities = 244/359 (67%), Positives = 289/359 (80%), Gaps = 4/359 (1%) Frame = +1 Query: 967 MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQ--PEKVFEIHAHEESCRAV 1140 MEI+LGKL FD+DFHPS L+ +GLI GDLHLYRY++ T P +V E+HAH ESCRA Sbjct: 1 MEINLGKLAFDIDFHPSENLVASGLIDGDLHLYRYSSDNTNSDPVRVLEVHAHTESCRAA 60 Query: 1141 RFINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCI 1320 RFINGG A+LT SPDFSILATDV+TG+TIARLDNAHEAAVNRL+NLTE+T+ASGDD+GCI Sbjct: 61 RFINGGRAVLTGSPDFSILATDVETGSTIARLDNAHEAAVNRLINLTESTVASGDDDGCI 120 Query: 1321 KVWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSE 1500 KVWDTR+R+CCNSF+AHE+YISD+T+A+D++K+L TSGDGTLSVC+LR+NKV QSEFSE Sbjct: 121 KVWDTRERSCCNSFEAHEDYISDITFASDAMKILATSGDGTLSVCNLRRNKVQAQSEFSE 180 Query: 1501 DEPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVIT 1680 DE LS+VLMKNGRKV+CG+Q G+LLLYSWG FKDCSDRF SNSID +LKLDE R+IT Sbjct: 181 DELLSVVLMKNGRKVVCGSQTGILLLYSWGCFKDCSDRFVDLASNSIDTMLKLDEGRIIT 240 Query: 1681 GTENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQ 1860 G+ENG+I+L+GILPNRII+PIAEHSEYPVERLA+SHDRKFLGSI HDQMLKLWDLD++LQ Sbjct: 241 GSENGMINLVGILPNRIIEPIAEHSEYPVERLAFSHDRKFLGSIGHDQMLKLWDLDNILQ 300 Query: 1861 GSSDVPRSQSAVA--XXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031 GS R+++ V N A+ SNNFFADL Sbjct: 301 GSRSTQRNETGVVANDGDSDDGDEMDVDNSAFKFSKGNRRKNASNGHAVGDSNNFFADL 359 >ref|XP_002269842.1| PREDICTED: WD repeat-containing protein 55 [Vitis vinifera] gi|298205166|emb|CBI17225.3| unnamed protein product [Vitis vinifera] Length = 346 Score = 500 bits (1287), Expect = e-139 Identities = 251/356 (70%), Positives = 293/356 (82%), Gaps = 1/356 (0%) Frame = +1 Query: 967 MEIDLGKLPFDLDFHPSSPLITAGLITGDLHLYRYAAIGTQPEKVFEIHAH-EESCRAVR 1143 MEI+LGKLPFD+DFHPS+ L+ AGLI GDLHLYRY A + P+++ E+HAH EESCRAVR Sbjct: 1 MEINLGKLPFDIDFHPSNTLVAAGLINGDLHLYRYGA-NSLPQRLLEVHAHGEESCRAVR 59 Query: 1144 FINGGTAILTASPDFSILATDVQTGATIARLDNAHEAAVNRLVNLTETTIASGDDNGCIK 1323 FIN G AI+T SPD SILATDV+TG+ IARL+++H AA++RL+NLTETTIASGDD GCIK Sbjct: 60 FINKGHAIVTGSPDRSILATDVETGSAIARLEHSHGAAISRLINLTETTIASGDDEGCIK 119 Query: 1324 VWDTRQRTCCNSFDAHEEYISDMTYAADSLKLLGTSGDGTLSVCSLRKNKVLTQSEFSED 1503 VWDTRQ++CCNSFDAHEEYISDMT+A+DS+KLLG SGDGTLSVC+LR+NKV QSEFSED Sbjct: 120 VWDTRQQSCCNSFDAHEEYISDMTFASDSMKLLGVSGDGTLSVCNLRRNKVQVQSEFSED 179 Query: 1504 EPLSIVLMKNGRKVICGTQNGVLLLYSWGYFKDCSDRFTGFQSNSIDVLLKLDEDRVITG 1683 E LS+VLMKNGRKVICGTQ+G LLLYSWG+FKDCSDRF NS+D LLKLDED VITG Sbjct: 180 ELLSVVLMKNGRKVICGTQSGALLLYSWGHFKDCSDRFIDLSPNSVDALLKLDEDSVITG 239 Query: 1684 TENGLISLIGILPNRIIQPIAEHSEYPVERLAYSHDRKFLGSISHDQMLKLWDLDDLLQG 1863 +ENGLISL+GILPNRIIQPIAEHSEYPVERLA+S DRK+LGSISHDQMLKLWDLDDLLQG Sbjct: 240 SENGLISLVGILPNRIIQPIAEHSEYPVERLAFSFDRKYLGSISHDQMLKLWDLDDLLQG 299 Query: 1864 SSDVPRSQSAVAXXXXXXXXXXXXTNPXXXXXXXXXXXXXXXQRALDASNNFFADL 2031 S RS+ A+A ++ +AL++S++FFADL Sbjct: 300 SGSTLRSREAMA---------DSDSDEMDVDAKETKRKTASNGQALNSSSSFFADL 346