BLASTX nr result

ID: Coptis25_contig00016344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016344
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323084.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
gb|AFK40919.1| unknown [Lotus japonicus]                              181   2e-43
ref|XP_003623633.1| hypothetical protein MTR_7g073370 [Medicago ...   178   1e-42
ref|XP_002267883.1| PREDICTED: uncharacterized protein LOC100260...   172   9e-41
emb|CAN66486.1| hypothetical protein VITISV_015393 [Vitis vinifera]   170   4e-40

>ref|XP_002323084.1| predicted protein [Populus trichocarpa] gi|222867714|gb|EEF04845.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  187 bits (476), Expect = 2e-45
 Identities = 103/218 (47%), Positives = 135/218 (61%), Gaps = 5/218 (2%)
 Frame = +1

Query: 10  YLDTILVPLSLFLTLGYHGLLWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLS 189
           YLDTIL PLSLFL +GYH  LWH  KNKP   +  I  ++++ W + + E  N +  ML+
Sbjct: 6   YLDTILAPLSLFLMVGYHAYLWHCFKNKPSQITEGIAALKRKTWFVQLKEGDN-RTGMLA 64

Query: 190 LQSLRNXXXXXXXXXXXXXXXXXCLAAFTNNTYKASHLLQDS-YFGLQSSRILALKYAST 366
           +QSLRN                  LAA TNN YKASHLL  S +FG QS ++  LK+ S 
Sbjct: 65  VQSLRNAQMTTILTAATAIIINLALAALTNNNYKASHLLSGSAFFGSQSGKLYVLKFGSA 124

Query: 367 SIFLLIGFLCSSMALGCLNDAHILA-AVSRL---PPGYVQGMMERGFLFSFIGHRMFYIT 534
           S+FLL+ FLCSSM L  L DA+ L  A SR     P Y Q + ERGF+ + +G+R+  IT
Sbjct: 125 SLFLLVSFLCSSMGLAFLIDANFLINAASREFSPSPTYTQTVFERGFMLALMGNRVLCIT 184

Query: 535 LPLLLWLFGPIPMLLSSMAIVWVLYGIDLADGGFKSEL 648
            PLL W+FGP+P+ LSS+A+VWVL+G+D       SE+
Sbjct: 185 FPLLAWMFGPVPVALSSVALVWVLHGLDFPGKSICSEM 222


>gb|AFK40919.1| unknown [Lotus japonicus]
          Length = 224

 Score =  181 bits (458), Expect = 2e-43
 Identities = 98/220 (44%), Positives = 131/220 (59%), Gaps = 2/220 (0%)
 Frame = +1

Query: 7   LYLDTILVPLSLFLTLGYHGLLWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLML 186
           +YLD ILVPLSLF+T+GYH  L H  KNKP   +  I+R+R+  W  ++ +   DKK ML
Sbjct: 5   VYLDIILVPLSLFITIGYHVYLCHAIKNKPSRTTYGIDRLRRTAWGENLNQG-EDKKAML 63

Query: 187 SLQSLRNXXXXXXXXXXXXXXXXXCLAAFTNNTYKASHLLQDSYFGLQSSRILALKYAST 366
           ++QSLRN                  LAA TNNTYKASHL    +FG +S ++  LKY S 
Sbjct: 64  TVQSLRNTLMTTILTATITILVNLALAALTNNTYKASHLFNSEFFGSKSDKVFVLKYGSA 123

Query: 367 SIFLLIGFLCSSMALGCLNDAHIL--AAVSRLPPGYVQGMMERGFLFSFIGHRMFYITLP 540
           S  LL  FLCSSMA+G L D++ L  A    L  GY Q ++ERGF  + +G+RM  + +P
Sbjct: 124 SFCLLFSFLCSSMAIGFLIDSNYLMNAYGEFLSGGYTQNILERGFTLALVGNRMLCVAVP 183

Query: 541 LLLWLFGPIPMLLSSMAIVWVLYGIDLADGGFKSELPQSS 660
           L+LW+ GP    L+S+A+VWVL   D     F  + P S+
Sbjct: 184 LMLWMLGPFAAFLASLALVWVLREFD-----FVPQFPHSN 218


>ref|XP_003623633.1| hypothetical protein MTR_7g073370 [Medicago truncatula]
           gi|355498648|gb|AES79851.1| hypothetical protein
           MTR_7g073370 [Medicago truncatula]
          Length = 225

 Score =  178 bits (452), Expect = 1e-42
 Identities = 95/223 (42%), Positives = 136/223 (60%), Gaps = 2/223 (0%)
 Frame = +1

Query: 7   LYLDTILVPLSLFLTLGYHGLLWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLML 186
           +YLDTILVPLSLF+T+ YH  L +  KNKP   +  I+++R+  W L++ +  +DKK ML
Sbjct: 5   IYLDTILVPLSLFITIVYHAFLCYTIKNKPSRTTYGIDKLRRTTWGLNVNQG-DDKKAML 63

Query: 187 SLQSLRNXXXXXXXXXXXXXXXXXCLAAFTNNTYKASHLLQDSYFGLQSSRILALKYAST 366
            +Q++RN                  LAA  NN + ASHL    +FG +S  I  LKYAS 
Sbjct: 64  CVQTMRNTLMTTILTATITILVNMALAALNNNAFNASHLFSSGFFGSKSDTIFLLKYASA 123

Query: 367 SIFLLIGFLCSSMALGCLNDAHIL--AAVSRLPPGYVQGMMERGFLFSFIGHRMFYITLP 540
           SI LLI FLCSSMA+G L DA+ L  A    L  GY Q ++E+GF  +F+G+R+F + +P
Sbjct: 124 SICLLISFLCSSMAIGFLIDANFLMNAYGDFLSGGYTQSVLEKGFTLAFVGNRVFCVAIP 183

Query: 541 LLLWLFGPIPMLLSSMAIVWVLYGIDLADGGFKSELPQSSTRC 669
           L+LW+ GP+ + L+S+A+V +L+  D     +  + PQ   RC
Sbjct: 184 LMLWMLGPVLVFLASIALVCLLHEFD-----YVPKFPQGQKRC 221


>ref|XP_002267883.1| PREDICTED: uncharacterized protein LOC100260118 [Vitis vinifera]
          Length = 235

 Score =  172 bits (435), Expect = 9e-41
 Identities = 93/205 (45%), Positives = 126/205 (61%), Gaps = 3/205 (1%)
 Frame = +1

Query: 13  LDTILVPLSLFLTLGYHGLLWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSL 192
           L+TILVP SLFLT+GYH  LWH  K KP L +I +    +R+W+  + +    +  +L++
Sbjct: 7   LNTILVPFSLFLTVGYHVFLWHSMKRKPFLTAIGMETSMRRVWLQKVKQG-GVRMGILAV 65

Query: 193 QSLRNXXXXXXXXXXXXXXXXXCLAAFTNNTYKASH-LLQDSYFGLQSSRILALKYASTS 369
           QSLRN                  LAA  NN Y ASH L+  ++FG QS  I  LKY S S
Sbjct: 66  QSLRNSLQETVLIALTAIAINTALAALINNAYSASHSLISGTFFGSQSGPIFYLKYVSAS 125

Query: 370 IFLLIGFLCSSMALGCLNDAHILAAVSR--LPPGYVQGMMERGFLFSFIGHRMFYITLPL 543
           +FLL  FLCSSM +GCL DA IL   S     PGY + +MERGF+F+ +G+RM Y+  PL
Sbjct: 126 LFLLASFLCSSMGVGCLIDASILINASGEFSSPGYAEMIMERGFMFALVGNRMLYMAFPL 185

Query: 544 LLWLFGPIPMLLSSMAIVWVLYGID 618
           L W+ GP+ +++SS+A+V  LY +D
Sbjct: 186 LSWMLGPVCLVVSSVALVCGLYELD 210


>emb|CAN66486.1| hypothetical protein VITISV_015393 [Vitis vinifera]
          Length = 232

 Score =  170 bits (430), Expect = 4e-40
 Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
 Frame = +1

Query: 13  LDTILVPLSLFLTLGYHGLLWHICKNKPHLRSIWINRIRKRLWVLSITEDTNDKKLMLSL 192
           L+TILVP SLFLT+GYH  LWH  K KP L +I +    +R+W+    +    +  +L++
Sbjct: 7   LNTILVPFSLFLTVGYHVFLWHSMKRKPFLTAIGMETSMRRVWL----QKGGVRMGILAV 62

Query: 193 QSLRNXXXXXXXXXXXXXXXXXCLAAFTNNTYKASH-LLQDSYFGLQSSRILALKYASTS 369
           QSLRN                  LAA  NN Y ASH L+  ++FG QS  I  LKY S S
Sbjct: 63  QSLRNSLQETVLIALTAIAINTALAALINNAYSASHSLISGTFFGSQSGPIFYLKYVSAS 122

Query: 370 IFLLIGFLCSSMALGCLNDAHILAAVSR--LPPGYVQGMMERGFLFSFIGHRMFYITLPL 543
           +FLL  FLCSSM +GCL DA IL   S     PGY + +MERGF+F+ +G+RM Y+  PL
Sbjct: 123 LFLLASFLCSSMGVGCLIDASILINASGEFSSPGYAEMIMERGFMFALVGNRMLYMAFPL 182

Query: 544 LLWLFGPIPMLLSSMAIVWVLYGID 618
           L W+ GP+ +++SS+A+V  LY +D
Sbjct: 183 LSWMLGPVCLVVSSVALVCGLYELD 207


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